PMC Links for GEO Profiles (Select 52738729) - PMC

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 82329034.

Systemic regulation of mitochondria by germline proteostasis prevents protein aggregation in the soma of C. elegans

Giuseppe Calculli, Hyun Ju Lee, Koning Shen, Uyen Pham, Marija Herholz, Aleksandra Trifunovic, Andrew Dillin, David Vilchez

Sci Adv. 2021 Jun; 7(26): eabg3012. Published online 2021 Jun 25. doi: 10.1126/sciadv.abg3012

PMCID:: PMC8232903

Abstract Article PDF–1.5M

Select item 79951765.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 68273686.

Germline Maintenance Through the Multifaceted Activities of GLH/Vasa in Caenorhabditis elegans P Granules

Elisabeth A. Marnik, J. Heath Fuqua, Catherine S. Sharp, Jesse D. Rochester, Emily L. Xu, Sarah E. Holbrook, Dustin L. Updike

Genetics. 2019 Nov; 213(3): 923–939. Published online 2019 Sep 10. doi: 10.1534/genetics.119.302670

PMCID:: PMC6827368

Abstract Article PDF–4.0M

Select item 67622137.

Reduction of mRNA export unmasks different tissue sensitivities to low mRNA levels during Caenorhabditis elegans development

Angelina Zheleva, Eva Gómez-Orte, Beatriz Sáenz-Narciso, Begoña Ezcurra, Henok Kassahun, María de Toro, Antonio Miranda-Vizuete, Ralf Schnabel, Hilde Nilsen, Juan Cabello

PLoS Genet. 2019 Sep; 15(9): e1008338. Published online 2019 Sep 16. doi: 10.1371/journal.pgen.1008338

PMCID:: PMC6762213

Abstract Article PDF–3.4M

Select item 67467568.

Identification of proteins and miRNAs that specifically bind an mRNA in vivo

Kathrin Theil, Koshi Imami, Nikolaus Rajewsky

Nat Commun. 2019; 10: 4205. Published online 2019 Sep 16. doi: 10.1038/s41467-019-12050-7

PMCID:: PMC6746756

Abstract Article PDF–6.8M

Select item 62165909.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 530527010.

β-Integrin de-phosphorylation by the Density-Enhanced Phosphatase DEP-1 attenuates EGFR signaling in C. elegans

Michael Walser, Christoph Alois Umbricht, Erika Fröhli, Paolo Nanni, Alex Hajnal

PLoS Genet. 2017 Jan; 13(1): e1006592. Published online 2017 Jan 30. doi: 10.1371/journal.pgen.1006592

PMCID:: PMC5305270

Abstract Article PDF–2.8M

Select item 485894511.

In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics

Jia-Xuan Chen, Patricia G. Cipriani, Desirea Mecenas, Jolanta Polanowska, Fabio Piano, Kristin C. Gunsalus, Matthias Selbach

Mol Cell Proteomics. 2016 May; 15(5): 1642–1657. Published online 2016 Feb 24. doi: 10.1074/mcp.M115.053975

PMCID:: PMC4858945

Abstract Article PDF–3.1M

Select item 384382212.

RNA-binding protein GLD-1/quaking genetically interacts with the mir-35 and the let-7 miRNA pathways in Caenorhabditis elegans

Alper Akay, Ashley Craig, Nicolas Lehrbach, Mark Larance, Ehsan Pourkarimi, Jane E. Wright, Angus Lamond, Eric Miska, Anton Gartner

Open Biol. 2013 Nov; 3(11): 130151. doi: 10.1098/rsob.130151

PMCID:: PMC3843822

Abstract Article PDF–1.1M

Select item 337136113.

The Caenorhabditis elegans RDE-10/RDE-11 complex regulates RNAi by promoting secondary siRNA amplification

Chi Zhang, Taiowa A. Montgomery, Sylvia E. J. Fischer, Susana M. D. A. Garcia, Christian G. Riedel, Noah Fahlgren, Christopher M. Sullivan, James C. Carrington, Gary Ruvkun

Curr Biol. Author manuscript; available in PMC 2013 May 22.

Published in final edited form as: Curr Biol. 2012 May 22; 22(10): 881–890. Published online 2012 Apr 26. doi: 10.1016/j.cub.2012.04.011

PMCID:: PMC3371361

Abstract Article PDF–1.8M

Select item 336495714.

Genome-Wide Analysis of GLD-1–Mediated mRNA Regulation Suggests a Role in mRNA Storage

Claudia Scheckel, Dimos Gaidatzis, Jane E. Wright, Rafal Ciosk

PLoS Genet. 2012 May; 8(5): e1002742. Published online 2012 May 31. doi: 10.1371/journal.pgen.1002742

PMCID:: PMC3364957

Abstract Article PDF–1.8M

Select item 310207715.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 268463316.

Caenorhabditis elegans Genomic Response to Soil Bacteria Predicts Environment-Specific Genetic Effects on Life History Traits

Joseph D. Coolon, Kenneth L. Jones, Timothy C. Todd, Bryanua C. Carr, Michael A. Herman

PLoS Genet. 2009 Jun; 5(6): e1000503. Published online 2009 Jun 5. doi: 10.1371/journal.pgen.1000503

PMCID:: PMC2684633

Abstract Article PDF–457K

Select item 217119817.

A complex containing the Sm protein CAR-1 and the RNA helicase CGH-1 is required for embryonic cytokinesis in Caenorhabditis elegans

Anjon Audhya, Francie Hyndman, Ian X. McLeod, Amy S. Maddox, John R. Yates, III, Arshad Desai, Karen Oegema

J Cell Biol. 2005 Oct 24; 171(2): 267–279. doi: 10.1083/jcb.200506124

PMCID:: PMC2171198

Abstract Article PDF–6.2M

Select item 169894918.

A Map of the Interactome Network of the Metazoan C. elegans

Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal

Science. Author manuscript; available in PMC 2006 Dec 14.

Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403

PMCID:: PMC1698949

Abstract Article PDF–1.4M

Select item 108828919.

Analysis of long-lived C. elegans daf-2 mutants using serial analysis of gene expression

Julius Halaschek-Wiener, Jaswinder S. Khattra, Sheldon McKay, Anatoli Pouzyrev, Jeff M. Stott, George S. Yang, Robert A. Holt, Steven J.M. Jones, Marco A. Marra, Angela R. Brooks-Wilson, Donald L. Riddle

Genome Res. 2005 May; 15(5): 603–615. doi: 10.1101/gr.3274805

PMCID:: PMC1088289

Abstract Article PDF–632K

Select item 12280320.

cdk-7 is required for mRNA transcription and cell cycle progression in Caenorhabditis elegans embryos

Matthew R. Wallenfang, Geraldine Seydoux

Proc Natl Acad Sci U S A. 2002 Apr 16; 99(8): 5527–5532. doi: 10.1073/pnas.082618399

PMCID:: PMC122803

Abstract Article PDF–517K

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