PMC Links for GEO Profiles (Select 52745831) - PMC - NCBI

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Items: 14

Select item 103231291.

Optimized protocol for in vivo affinity purification proteomics and biochemistry using C. elegans

Muriel Desbois, Joseph S. Pak, Karla J. Opperman, Andrew C. Giles, Brock Grill

STAR Protoc. 2023 Jun 16; 4(2): 102262. Published online 2023 Jun 8. doi: 10.1016/j.xpro.2023.102262

PMCID:: PMC10323129

Abstract Article PDF–6.8M

Select item 94378482.

Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans

Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono

J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343

PMCID:: PMC9437848

Abstract Article PDF–2.0M

Select item 84467933.

Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling

Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono

J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094

Correction in:: J Biol Chem. 2022 Jun; 298(6): 102081.

PMCID:: PMC8446793

Abstract Article PDF–1.6M

Select item 83311834.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 79951765.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 68261456.

The conserved histone chaperone LIN‐53 is required for normal lifespan and maintenance of muscle integrity in Caenorhabditis elegans

Stefanie Müthel, Bora Uyar, Mei He, Anne Krause, Burcu Vitrinel, Selman Bulut, Djordje Vasiljevic, Iris Marchal, Stefan Kempa, Altuna Akalin, Baris Tursun

Aging Cell. 2019 Dec; 18(6): e13012. Published online 2019 Aug 9. doi: 10.1111/acel.13012

PMCID:: PMC6826145

Abstract Article PDF–3.0M

Select item 62165907.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 53131188.

Defining Minimal Binding Regions in Regulator of Presynaptic Morphology 1 (RPM-1) Using Caenorhabditis elegans Neurons Reveals Differential Signaling Complexes

Scott T. Baker, Brock Grill

J Biol Chem. 2017 Feb 10; 292(6): 2519–2530. Published online 2016 Dec 15. doi: 10.1074/jbc.M116.748004

PMCID:: PMC5313118

Abstract Article PDF–2.1M

Select item 42638719.

Identification of a Peptide Inhibitor of the RPM-1·FSN-1 Ubiquitin Ligase Complex

Jaiprakash Sharma, Scott T. Baker, Shane M. Turgeon, Allison M. Gurney, Karla J. Opperman, Brock Grill

J Biol Chem. 2014 Dec 12; 289(50): 34654–34666. Published online 2014 Oct 17. doi: 10.1074/jbc.M114.614065

PMCID:: PMC4263871

Abstract Article PDF–1.9M

Select item 358566310.

PUF-8 and TCER-1 are essential for normal levels of multiple mRNAs in the C. elegans germline

Kumari Pushpa, Ganga Anil Kumar, Kuppuswamy Subramaniam

Development. 2013 Mar 15; 140(6): 1312–1320. doi: 10.1242/dev.087833

PMCID:: PMC3585663

Abstract Article

Select item 355492111.

RNA Targets and Specificity of Staufen, a Double-stranded RNA-binding Protein in Caenorhabditis elegans

Jacqueline Baca LeGendre, Zachary T. Campbell, Peggy Kroll-Conner, Phil Anderson, Judith Kimble, Marvin Wickens

J Biol Chem. 2013 Jan 25; 288(4): 2532–2545. Published online 2012 Nov 29. doi: 10.1074/jbc.M112.397349

PMCID:: PMC3554921

Abstract Article PDF–2.3M

Select item 330217112.

RAE-1, a Novel PHR Binding Protein, Is Required for Axon Termination and Synapse Formation in Caenorhabditis elegans

Brock Grill, Lizhen Chen, Erik D. Tulgren, Scott T. Baker, Willy Bienvenut, Matthew Anderson, Manfredo Quadroni, Yishi Jin, Craig C. Garner

J Neurosci. 2012 Feb 22; 32(8): 2628–2636. doi: 10.1523/JNEUROSCI.2901-11.2012

PMCID:: PMC3302171

Abstract Article PDF–1.5M

Select item 310207713.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 28481214.

Caenorhabditis elegans Nucleoporins Nup93 and Nup205 Determine the Limit of Nuclear Pore Complex Size Exclusion In Vivo

Vincent Galy, Iain W. Mattaj, Peter Askjaer

Mol Biol Cell. 2003 Dec; 14(12): 5104–5115. doi: 10.1091/mbc.E03-04-0237

PMCID:: PMC284812

Abstract Article PDF–658K

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