PMC Links for GEO Profiles (Select 52746980) - PMC

Select item 101674811.

Systems‐level transcriptional regulation of Caenorhabditis elegans metabolism

Shivani Nanda, Marc‐Antoine Jacques, Wen Wang, Chad L Myers, L Safak Yilmaz, Albertha JM Walhout

Mol Syst Biol. 2023 May; 19(5): e11443. Published online 2023 Mar 21. doi: 10.15252/msb.202211443

PMCID:: PMC10167481

Select item 93529232.

Polyunsaturated fatty acids promote the rapid fusion of lipid droplets in Caenorhabditis elegans

Yanli Wang, Chunxia Li, Jingjing Zhang, Xiumei Xu, Lin Fu, Jie Xu, Hong Zhu, Ying Hu, Chengbin Li, Mengjie Wang, Yingjie Wu, Xiaoju Zou, Bin Liang

J Biol Chem. 2022 Aug; 298(8): 102179. Published online 2022 Jun 23. doi: 10.1016/j.jbc.2022.102179

PMCID:: PMC9352923

Abstract Article PDF–5.4M

Select item 91277693.

Meta-Analysis of Caenorhabditis elegans Transcriptomics Implicates Hedgehog-Like Signaling in Host-Microbe Interactions

Alejandra Zárate-Potes, Irtiqa Ali, Margarida Ribeiro Camacho, Hayley Brownless, Alexandre Benedetto

Front Microbiol. 2022; 13: 853629. Published online 2022 May 10. doi: 10.3389/fmicb.2022.853629

PMCID:: PMC9127769

Abstract Article PDF–4.6M

Select item 79951764.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 70540125.

New Roles for the Heterochronic Transcription Factor LIN-29 in Cuticle Maintenance and Lipid Metabolism at the Larval-to-Adult Transition in Caenorhabditis elegans

Patricia Abete-Luzi, Tetsunari Fukushige, Sijung Yun, Michael W. Krause, David M. Eisenmann

Genetics. 2020 Mar; 214(3): 669–690. Published online 2020 Jan 23. doi: 10.1534/genetics.119.302860

PMCID:: PMC7054012

Abstract Article PDF–2.1M

Select item 68273686.

Germline Maintenance Through the Multifaceted Activities of GLH/Vasa in Caenorhabditis elegans P Granules

Elisabeth A. Marnik, J. Heath Fuqua, Catherine S. Sharp, Jesse D. Rochester, Emily L. Xu, Sarah E. Holbrook, Dustin L. Updike

Genetics. 2019 Nov; 213(3): 923–939. Published online 2019 Sep 10. doi: 10.1534/genetics.119.302670

PMCID:: PMC6827368

Abstract Article PDF–4.0M

Select item 67978017.

MDT-28/PLIN-1 mediates lipid droplet-microtubule interaction via DLC-1 in Caenorhabditis elegans

Kang Xie, Peng Zhang, Huimin Na, Yangli Liu, Hong Zhang, Pingsheng Liu

Sci Rep. 2019; 9: 14902. Published online 2019 Oct 17. doi: 10.1038/s41598-019-51399-z

PMCID:: PMC6797801

Abstract Article PDF–7.7M

Select item 62165908.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 59862729.

Biosynthetic tailoring of existing ascaroside pheromones alters their biological function in C. elegans

Yue Zhou, Yuting Wang, Xinxing Zhang, Subhradeep Bhar, Rachel A Jones Lipinski, Jungsoo Han, Likui Feng, Rebecca A Butcher

eLife. 2018; 7: e33286. Published online 2018 Jun 4. doi: 10.7554/eLife.33286

PMCID:: PMC5986272

Abstract Article PDF–1.6M

Select item 497889510.

A Genetic Screen for Mutants with Supersized Lipid Droplets in Caenorhabditis elegans

Shiwei Li, Shibin Xu, Yanli Ma, Shuang Wu, Yu Feng, Qingpo Cui, Lifeng Chen, Shuang Zhou, Yuanyuan Kong, Xiaoyu Zhang, Jialei Yu, Mengdi Wu, Shaobing O. Zhang

G3 (Bethesda) 2016 Aug; 6(8): 2407–2419. Published online 2016 Jun 1. doi: 10.1534/g3.116.030866

PMCID:: PMC4978895

Abstract Article PDF–3.2M

Select item 378551611.

Peroxisome Protein Transportation Affects Metabolism of Branched-Chain Fatty Acids That Critically Impact Growth and Development of C. elegans

Rencheng Wang, Marina Kniazeva, Min Han

PLoS One. 2013; 8(9): e76270. Published online 2013 Sep 27. doi: 10.1371/journal.pone.0076270

PMCID:: PMC3785516

Abstract Article PDF–859K

Select item 360267212.

Comparative genomics and functional study of lipid metabolic genes in Caenorhabditis elegans

Yuru Zhang, Xiaoju Zou, Yihong Ding, Haizhen Wang, Xiaoyun Wu, Bin Liang

BMC Genomics. 2013; 14: 164. Published online 2013 Mar 12. doi: 10.1186/1471-2164-14-164

PMCID:: PMC3602672

Abstract Article PDF–1.8M

Select item 355492113.

RNA Targets and Specificity of Staufen, a Double-stranded RNA-binding Protein in Caenorhabditis elegans

Jacqueline Baca LeGendre, Zachary T. Campbell, Peggy Kroll-Conner, Phil Anderson, Judith Kimble, Marvin Wickens

J Biol Chem. 2013 Jan 25; 288(4): 2532–2545. Published online 2012 Nov 29. doi: 10.1074/jbc.M112.397349

PMCID:: PMC3554921

Abstract Article PDF–2.3M

Select item 326913414.

Comparative Metabolomics Reveals Biogenesis of Ascarosides, a Modular Library of Small-Molecule Signals in C. elegans

Stephan H. von Reuss, Neelanjan Bose, Jagan Srinivasan, Joshua J. Yim, Joshua C. Judkins, Paul W. Sternberg, Frank C. Schroeder

J Am Chem Soc. Author manuscript; available in PMC 2013 Jan 25.

Published in final edited form as: J Am Chem Soc. 2012 Jan 25; 134(3): 1817–1824. Published online 2012 Jan 12. doi: 10.1021/ja210202y

PMCID:: PMC3269134

Abstract Article PDF–3.7M

Select item 310207715.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 284206216.

Genetic and dietary regulation of lipid droplet expansion in Caenorhabditis elegans

Shaobing O. Zhang, Andrew C. Box, Ningyi Xu, Johan Le Men, Jingyi Yu, Fengli Guo, Rhonda Trimble, Ho Yi Mak

Proc Natl Acad Sci U S A. 2010 Mar 9; 107(10): 4640–4645. Published online 2010 Feb 22. doi: 10.1073/pnas.0912308107

PMCID:: PMC2842062

Abstract Article PDF–1.3M

Select item 169894917.

A Map of the Interactome Network of the Metazoan C. elegans

Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal

Science. Author manuscript; available in PMC 2006 Dec 14.

Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403

PMCID:: PMC1698949

Abstract Article PDF–1.4M

Select item 159991618.

A conserved role for a GATA transcription factor in regulating epithelial innate immune responses

Michael Shapira, Brigham J. Hamlin, Jiming Rong, Karen Chen, Michal Ronen, Man-Wah Tan

Proc Natl Acad Sci U S A. 2006 Sep 19; 103(38): 14086–14091. Published online 2006 Sep 12. doi: 10.1073/pnas.0603424103

PMCID:: PMC1599916

Abstract Article PDF–753K

Select item 118353119.

New Genes Tied to Endocrine, Metabolic, and Dietary Regulation of Lifespan from a Caenorhabditis elegans Genomic RNAi Screen

Malene Hansen, Ao-Lin Hsu, Andrew Dillin, Cynthia Kenyon

PLoS Genet. 2005 Jul; 1(1): e17. Published online 2005 Jul 25. doi: 10.1371/journal.pgen.0010017

PMCID:: PMC1183531

Abstract Article PDF–227K

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