PMC Links for GEO Profiles (Select 52805684) - PMC

Irem Sepil, Ben R. Hopkins, Rebecca Dean, Eleanor Bath, Solomon Friedman, Ben Swanson, Harrison J. Ostridge, Lucy Harper, Norene A. Buehner, Mariana F. Wolfner, Rebecca Konietzny, Marie-Laëtitia Thézénas, Elizabeth Sandham, Philip D. Charles, Roman Fischer, Josefa Steinhauer, Benedikt M. Kessler, Stuart Wigby

Proc Natl Acad Sci U S A. 2020 Jul 21; 117(29): 17094–17103. Published online 2020 Jul 1. doi: 10.1073/pnas.2009053117

PMCID:: PMC7382285

Abstract Article PDF–7.8M

Select item 69006347.

BMP signaling inhibition in Drosophila secondary cells remodels the seminal proteome and self and rival ejaculate functions

Ben R. Hopkins, Irem Sepil, Sarah Bonham, Thomas Miller, Philip D. Charles, Roman Fischer, Benedikt M. Kessler, Clive Wilson, Stuart Wigby

Proc Natl Acad Sci U S A. 2019 Dec 3; 116(49): 24719–24728. Published online 2019 Nov 18. doi: 10.1073/pnas.1914491116

PMCID:: PMC6900634

Abstract Article PDF–1.3M

Select item 67316778.

Divergent allocation of sperm and the seminal proteome along a competition gradient in Drosophila melanogaster

Ben R. Hopkins, Irem Sepil, Marie-Laëtitia Thézénas, James F. Craig, Thomas Miller, Philip D. Charles, Roman Fischer, Benedikt M. Kessler, Amanda Bretman, Tommaso Pizzari, Stuart Wigby

Proc Natl Acad Sci U S A. 2019 Sep 3; 116(36): 17925–17933. Published online 2019 Aug 20. doi: 10.1073/pnas.1906149116

PMCID:: PMC6731677

Abstract Article PDF–1.3M

Select item 63582149.

Building a platform for predicting functions of serine protease-related proteins in Drosophila melanogaster and other insects

Xiaolong Cao, Haobo Jiang

Insect Biochem Mol Biol. Author manuscript; available in PMC 2019 Dec 1.

Published in final edited form as: Insect Biochem Mol Biol. 2018 Dec; 103: 53–69. Published online 2018 Oct 24. doi: 10.1016/j.ibmb.2018.10.006

PMCID:: PMC6358214

Abstract Article PDF–6.9M

Select item 624907010.

Long-term interaction between Drosophila sperm and sex peptide is mediated by other seminal proteins that bind only transiently to sperm

Akanksha Singh, Norene A. Buehner, He Lin, Kaitlyn J. Baranowski, Geoffrey D. Findlay, Mariana F. Wolfner

Insect Biochem Mol Biol. Author manuscript; available in PMC 2019 Nov 1.

Published in final edited form as: Insect Biochem Mol Biol. 2018 Nov; 102: 43–51. Published online 2018 Sep 11. doi: 10.1016/j.ibmb.2018.09.004

PMCID:: PMC6249070

Abstract Article PDF–2.5M

Select item 570780511.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900212.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 478811613.

Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet

Ibrahim Ömer Çiçek, Samir Karaca, Marko Brankatschk, Suzanne Eaton, Henning Urlaub, Halyna R. Shcherbata

Genetics. 2016 Mar; 202(3): 1167–1183. Published online 2016 Jan 22. doi: 10.1534/genetics.115.185371

PMCID:: PMC4788116

Abstract Article PDF–4.7M

Select item 452833014.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832915.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288716.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114