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Items: 1 to 20 of 68

1.
Prevalent Fast Evolution of Genes Involved in Heterochromatin Functions
Leila Lin, Yuheng Huang, Jennifer McIntyre, Ching-Ho Chang, Serafin Colmenares, Yuh Chwen G Lee
Mol Biol Evol. 2024 Sep; 41(9): msae181. Published online 2024 Aug 27. doi: 10.1093/molbev/msae181
PMCID:
PMC11408610
AbstractArticlePDF–1.6M
2.
Developmental and Housekeeping Genes: Two Types of Genetic Organization in the Drosophila Genome
Igor Zhimulev, Tatyana Vatolina, Victor Levitsky, Anton Tsukanov
Int J Mol Sci. 2024 Apr; 25(7): 4068. Published online 2024 Apr 6. doi: 10.3390/ijms25074068
PMCID:
PMC11012173
AbstractArticlePDF–5.7M
3.
Drosophila SUMM4 complex couples insulator function and DNA replication control
Evgeniya N Andreyeva, Alexander V Emelyanov, Markus Nevil, Lu Sun, Elena Vershilova, Christina A Hill, Michael-C Keogh, Robert J Duronio, Arthur I Skoultchi, Dmitry V Fyodorov
eLife. 2022; 11: e81828. Published online 2022 Dec 2. doi: 10.7554/eLife.81828
PMCID:
PMC9917439
AbstractArticlePDF–3.1M
4.
Species-specific chromatin landscape determines how transposable elements shape genome evolution
Yuheng Huang, Harsh Shukla, Yuh Chwen G Lee
eLife. 2022; 11: e81567. Published online 2022 Aug 23. doi: 10.7554/eLife.81567
PMCID:
PMC9398452
AbstractArticlePDF–5.5M
5.
The Organization of Pericentromeric Heterochromatin in Polytene Chromosome 3 of the Drosophilamelanogaster Line with the Rif11; SuURES Su(var)3-906 Mutations Suppressing Underreplication
Tatyana Zykova, Mariya Maltseva, Fedor Goncharov, Lidia Boldyreva, Galina Pokholkova, Tatyana Kolesnikova, Igor Zhimulev
Cells. 2021 Nov; 10(11): 2809. Published online 2021 Oct 20. doi: 10.3390/cells10112809
PMCID:
PMC8616060
AbstractArticlePDF–5.8M
6.
Replication timing analysis in polyploid cells reveals Rif1 uses multiple mechanisms to promote underreplication in Drosophila
Souradip Das, Madison Caballero, Tatyana Kolesnikova, Igor Zhimulev, Amnon Koren, Jared Nordman
Genetics. 2021 Nov; 219(3): iyab147. Published online 2021 Sep 13. doi: 10.1093/genetics/iyab147
PMCID:
PMC8570783
AbstractArticlePDF–1.8M
7.
Chromatin Organization and Function in Drosophila
Palmira Llorens-Giralt, Carlos Camilleri-Robles, Montserrat Corominas, Paula Climent-Cantó
Cells. 2021 Sep; 10(9): 2362. Published online 2021 Sep 8. doi: 10.3390/cells10092362
PMCID:
PMC8465611
AbstractArticlePDF–1.2M
8.
Sleep drive reconfigures wake-promoting clock circuitry to regulate adaptive behavior
Markus K. Klose, Paul J. Shaw
PLoS Biol. 2021 Jun; 19(6): e3001324. Published online 2021 Jun 30. doi: 10.1371/journal.pbio.3001324
PMCID:
PMC8277072
AbstractArticlePDF–2.8M
9.
Establishment and evolution of heterochromatin
Jing Liu, Mujahid Ali, Qi Zhou
Ann N Y Acad Sci. 2020 Sep; 1476(1): 59–77. Published online 2020 Feb 4. doi: 10.1111/nyas.14303
PMCID:
PMC7586837
AbstractArticlePDF–1.0M
10.
Insights into HP1a-Chromatin Interactions
Silvia Meyer-Nava, Victor E. Nieto-Caballero, Mario Zurita, Viviana Valadez-Graham
Cells. 2020 Aug; 9(8): 1866. Published online 2020 Aug 9. doi: 10.3390/cells9081866
PMCID:
PMC7465937
AbstractArticlePDF–2.2M
11.
Effects of Mutations in the Drosophila melanogaster Rif1 Gene on the Replication and Underreplication of Pericentromeric Heterochromatin in Salivary Gland Polytene Chromosomes
Tatyana D. Kolesnikova, Alexandra V. Kolodyazhnaya, Galina V. Pokholkova, Veit Schubert, Viktoria V. Dovgan, Svetlana A. Romanenko, Dmitry Yu. Prokopov, Igor F. Zhimulev
Cells. 2020 Jun; 9(6): 1501. Published online 2020 Jun 19. doi: 10.3390/cells9061501
PMCID:
PMC7349278
AbstractArticlePDF–13M
12.
Asymmetric Histone Inheritance in Asymmetrically Dividing Stem Cells
Matthew Wooten, Rajesh Ranjan, Xin Chen
Trends Genet. Author manuscript; available in PMC 2021 Jan 1.
Published in final edited form as: Trends Genet. 2020 Jan; 36(1): 30–43. Published online 2019 Nov 18. doi: 10.1016/j.tig.2019.10.004
PMCID:
PMC6925335
AbstractArticlePDF–1.1M
13.
Molecular and genetic organization of bands and interbands in the dot chromosome of Drosophila melanogaster
Darya S. Sidorenko, Ivan A. Sidorenko, Tatyana Yu. Zykova, Fedor P. Goncharov, Jan Larsson, Igor F. Zhimulev
Chromosoma. 2019; 128(2): 97–117. Published online 2019 Apr 30. doi: 10.1007/s00412-019-00703-x
PMCID:
PMC6536484
AbstractArticlePDF–8.1M
14.
Rif1 inhibits replication fork progression and controls DNA copy number in Drosophila
Alexander Munden, Zhan Rong, Amanda Sun, Rama Gangula, Simon Mallal, Jared T Nordman
eLife. 2018; 7: e39140. Published online 2018 Oct 2. doi: 10.7554/eLife.39140
PMCID:
PMC6185109
AbstractArticlePDF–4.4M
15.
Dynamic changes in ORC localization and replication fork progression during tissue differentiation
Brian L. Hua, George W. Bell, Helena Kashevsky, Jessica R. Von Stetina, Terry L. Orr-Weaver
BMC Genomics. 2018; 19: 623. Published online 2018 Aug 22. doi: 10.1186/s12864-018-4992-3
PMCID:
PMC6103881
AbstractArticlePDF–2.0M
16.
Similarity in replication timing between polytene and diploid cells is associated with the organization of the Drosophila genome
Tatyana D. Kolesnikova, Fedor P. Goncharov, Igor F. Zhimulev
PLoS One. 2018; 13(4): e0195207. Published online 2018 Apr 16. doi: 10.1371/journal.pone.0195207
PMCID:
PMC5902040
AbstractArticlePDF–10M
17.
Tethering of CHROMATOR and dCTCF proteins results in decompaction of condensed bands in the Drosophila melanogaster polytene chromosomes but does not affect their transcription and replication timing
Galina V. Pokholkova, Sergei A. Demakov, Oleg V. Andreenkov, Natalia G. Andreenkova, Elena I. Volkova, Elena S. Belyaeva, Igor F. Zhimulev
PLoS One. 2018; 13(4): e0192634. Published online 2018 Apr 2. doi: 10.1371/journal.pone.0192634
PMCID:
PMC5880345
AbstractArticlePDF–23M
18.
Functional dissection of Drosophila melanogaster SUUR protein influence on H3K27me3 profile
Olga V. Posukh, Daniil A. Maksimov, Petr P. Laktionov, Dmitry E. Koryakov, Stepan N. Belyakin
Epigenetics Chromatin. 2017; 10: 56. Published online 2017 Dec 1. doi: 10.1186/s13072-017-0163-z
PMCID:
PMC5709859
AbstractArticlePDF–1.6M
19.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
20.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M

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