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Select item 101158151.

Mapping genomic regulation of kidney disease and traits through high-resolution and interpretable eQTLs

Seong Kyu Han, Michelle T. McNulty, Christopher J. Benway, Pei Wen, Anya Greenberg, Ana C. Onuchic-Whitford, Nephrotic Syndrome Study Network (NEPTUNE), Dongkeun Jang, Jason Flannick, Noël P. Burtt, Parker C. Wilson, Benjamin D. Humphreys, Xiaoquan Wen, Zhe Han, Dongwon Lee, Matthew G. Sampson

Nat Commun. 2023; 14: 2229. Published online 2023 Apr 19. doi: 10.1038/s41467-023-37691-7

PMCID:: PMC10115815

Abstract Article PDF–4.2M

Select item 88924952.

CSB-independent, XPC-dependent transcription-coupled repair in Drosophila

Nazli Deger, Xuemei Cao, Christopher P. Selby, Saygin Gulec, Hiroaki Kawara, Evan B. Dewey, Li Wang, Yanyan Yang, Sierra Archibald, Berkay Selcuk, Ogun Adebali, Jeff Sekelsky, Aziz Sancar, Zhenxing Liu

Proc Natl Acad Sci U S A. 2022 Mar 1; 119(9): e2123163119. Published online 2022 Feb 25. doi: 10.1073/pnas.2123163119

PMCID:: PMC8892495

Abstract Article PDF–2.5M

Select item 87334733.

The disease-associated proteins Drosophila Nab2 and Ataxin-2 interact with shared RNAs and coregulate neuronal morphology

J Christopher Rounds, Edwin B Corgiat, Changtian Ye, Joseph A Behnke, Seth M Kelly, Anita H Corbett, Kenneth H Moberg

Genetics. 2022 Jan; 220(1): iyab175. Published online 2022 Jan 3. doi: 10.1093/genetics/iyab175

PMCID:: PMC8733473

Abstract Article PDF–2.4M

Select item 86644864.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 86320985.

Optimal RNA binding by Egalitarian, a Dynein cargo adaptor, is critical for maintaining oocyte fate in Drosophila

Chandler H. Goldman, Hannah Neiswender, Frederick Baker, Rajalakshmi Veeranan-Karmegam, Saurav Misra, Graydon B. Gonsalvez

RNA Biol. 2021; 18(12): 2376–2389. Published online 2021 Apr 27. doi: 10.1080/15476286.2021.1914422

PMCID:: PMC8632098

Abstract Article PDF–19M

Select item 86149566.

Regulation of Heme Oxygenase and Its Cross-Talks with Apoptosis and Autophagy under Different Conditions in Drosophila

Terence Al L. Abaquita, Milena Damulewicz, Debarati Bhattacharya, Elżbieta Pyza

Antioxidants (Basel) 2021 Nov; 10(11): 1716. Published online 2021 Oct 28. doi: 10.3390/antiox10111716

PMCID:: PMC8614956

Abstract Article PDF–2.2M

Select item 77290087.

Involvement of DNA Repair Genes and System of Radiation-Induced Activation of Transposons in Formation of Transgenerational Effects

Elena Yushkova

Front Genet. 2020; 11: 596947. Published online 2020 Nov 27. doi: 10.3389/fgene.2020.596947

PMCID:: PMC7729008

Abstract Article PDF–1.9M

Select item 69615788.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 57078059.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900210.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 528983011.

DNA Repair in Drosophila: Mutagens, Models, and Missing Genes

Jeff Sekelsky

Genetics. 2017 Feb; 205(2): 471–490. Published online 2017 Jan 31. doi: 10.1534/genetics.116.186759

PMCID:: PMC5289830

Abstract Article PDF–891K

Select item 527052112.

The mRNA transportome of the BicD/Egl transport machinery

Paula Vazquez-Pianzola, Bogdan Schaller, Martino Colombo, Dirk Beuchle, Samuel Neuenschwander, Anne Marcil, Rémy Bruggmann, Beat Suter

RNA Biol. 2017; 14(1): 73–89. Published online 2016 Nov 1. doi: 10.1080/15476286.2016.1251542

PMCID:: PMC5270521

Abstract Article PDF–2.1M

Select item 492804713.

Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome

Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair

Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999

PMCID:: PMC4928047

Abstract Article PDF–3.1M

Select item 478811614.

Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet

Ibrahim Ömer Çiçek, Samir Karaca, Marko Brankatschk, Suzanne Eaton, Henning Urlaub, Halyna R. Shcherbata

Genetics. 2016 Mar; 202(3): 1167–1183. Published online 2016 Jan 22. doi: 10.1534/genetics.115.185371

PMCID:: PMC4788116

Abstract Article PDF–4.7M

Select item 478080915.

The Adaptive Significance of Natural Genetic Variation in the DNA Damage Response of Drosophila melanogaster

Nicolas Svetec, Julie M. Cridland, Li Zhao, David J. Begun

PLoS Genet. 2016 Mar; 12(3): e1005869. Published online 2016 Mar 7. doi: 10.1371/journal.pgen.1005869

PMCID:: PMC4780809

Abstract Article PDF–543K

Select item 460991216.

Lifespan and Stress Resistance in Drosophila with Overexpressed DNA Repair Genes

Mikhail Shaposhnikov, Ekaterina Proshkina, Lyubov Shilova, Alex Zhavoronkov, Alexey Moskalev

Sci Rep. 2015; 5: 15299. Published online 2015 Oct 19. doi: 10.1038/srep15299

PMCID:: PMC4609912

Abstract Article PDF–1.0M

Select item 452833017.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832918.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 440366719.

Transcription Factor Networks in Drosophila melanogaster

David Y. Rhee, Dong-Yeon Cho, Bo Zhai, Matthew Slattery, Lijia Ma, Julian Mintseris, Christina Y. Wong, Kevin P. White, Susan E. Celniker, Teresa M. Przytycka, Steven P. Gygi, Robert A. Obar, Spyros Artavanis-Tsakonas

Cell Rep. Author manuscript; available in PMC 2015 Apr 20.

Published in final edited form as: Cell Rep. 2014 Sep 25; 8(6): 2031–2043. Published online 2014 Sep 18. doi: 10.1016/j.celrep.2014.08.038