PMC Links for GEO Profiles (Select 5314887) - PMC

Carmen Bravo González-Blas, Seppe De Winter, Gert Hulselmans, Nikolai Hecker, Irina Matetovici, Valerie Christiaens, Suresh Poovathingal, Jasper Wouters, Sara Aibar, Stein Aerts

Nat Methods. 2023; 20(9): 1355–1367. Published online 2023 Jul 13. doi: 10.1038/s41592-023-01938-4

PMCID:: PMC10482700

Abstract Article PDF–27M

Select item 104349716.

In-silico identification and comparison of transcription factor binding sites cluster in anterior-posterior patterning genes in Drosophila melanogaster and Tribolium castaneum

Anshika Moudgil, Ranbir Chander Sobti, Tejinder Kaur

PLoS One. 2023; 18(8): e0290035. Published online 2023 Aug 17. doi: 10.1371/journal.pone.0290035

PMCID:: PMC10434971

Abstract Article PDF–2.1M

Select item 103681867.

Genome organization controls transcriptional dynamics during development

Philippe J. Batut, Xin Yang Bing, Zachary Sisco, João Raimundo, Michal Levo, Michael S. Levine

Science. Author manuscript; available in PMC 2023 Jul 25.

Published in final edited form as: Science. 2022 Feb 4; 375(6580): 566–570. Published online 2022 Feb 3. doi: 10.1126/science.abi7178

PMCID:: PMC10368186

Abstract Article PDF–1.4M

Select item 103177848.

Interactions with ectoparasitic mites induce host metabolic and immune responses in flies at the expense of reproduction-associated factors

Joshua B. Benoit, Joy Bose, Samuel T. Bailey, Michal Polak

Parasitology. 2020 Sep; 147(11): 1196–1205. Published online 2020 Jun 5. doi: 10.1017/S0031182020000918

PMCID:: PMC10317784

Abstract Article PDF–602K

Select item 101020029.

Screening of Drosophila microRNA-degradation sequences reveals Argonaute1 mRNA’s role in regulating miR-999

Peike Sheng, Lu Li, Tianqi Li, Yuzhi Wang, Nicholas M. Hiers, Jennifer S. Mejia, Jossie S. Sanchez, Lei Zhou, Mingyi Xie

Nat Commun. 2023; 14: 2108. Published online 2023 Apr 13. doi: 10.1038/s41467-023-37819-9

PMCID:: PMC10102002

Abstract Article PDF–3.2M

Select item 996897810.

Characterisation of the role and regulation of Ultrabithorax in sculpting fine-scale leg morphology

Alexandra D. Buffry, Sebastian Kittelmann, Alistair P. McGregor

Front Cell Dev Biol. 2023; 11: 1119221. Published online 2023 Feb 13. doi: 10.3389/fcell.2023.1119221

PMCID:: PMC9968978

Abstract Article PDF–4.1M

Select item 996875911.

Assessment of distant-site rescue elements for CRISPR toxin-antidote gene drives

Jingheng Chen, Xuejiao Xu, Jackson Champer

Front Bioeng Biotechnol. 2023; 11: 1138702. Published online 2023 Feb 13. doi: 10.3389/fbioe.2023.1138702

PMCID:: PMC9968759

Abstract Article PDF–1.6M

Select item 994090912.

Geometric control of myosin II orientation during axis elongation

Matthew F Lefebvre, Nikolas H Claussen, Noah P Mitchell, Hannah J Gustafson, Sebastian J Streichan

eLife. 2023; 12: e78787. Published online 2023 Jan 30. doi: 10.7554/eLife.78787

PMCID:: PMC9940909

Abstract Article PDF–15M

Select item 971343113.

Transcriptome analysis of FOXO-dependent hypoxia gene expression identifies Hipk as a regulator of low oxygen tolerance in Drosophila

Kate Ding, Elizabeth C Barretto, Michael Johnston, Byoungchun Lee, Marco Gallo, Savraj S Grewal

G3 (Bethesda) 2022 Dec; 12(12): jkac263. Published online 2022 Oct 6. doi: 10.1093/g3journal/jkac263

PMCID:: PMC9713431

Abstract Article PDF–1.0M

Select item 964861814.

Endogenous transcripts direct microRNA degradation in Drosophila, and this targeted degradation is required for proper embryonic development

Elena R. Kingston, Lianne W. Blodgett, David P. Bartel

Mol Cell. Author manuscript; available in PMC 2023 Oct 20.

Published in final edited form as: Mol Cell. 2022 Oct 20; 82(20): 3872–3884.e9. Published online 2022 Sep 22. doi: 10.1016/j.molcel.2022.08.029

PMCID:: PMC9648618

Abstract Article PDF–1.8M

Select item 912822715.

Experimental demonstration of tethered gene drive systems for confined population modification or suppression

Matthew Metzloff, Emily Yang, Sumit Dhole, Andrew G. Clark, Philipp W. Messer, Jackson Champer

BMC Biol. 2022; 20: 119. Published online 2022 May 24. doi: 10.1186/s12915-022-01292-5

PMCID:: PMC9128227

Abstract Article PDF–2.6M

Select item 909252016.

The great small organisms of developmental genetics: Caenorhabditis elegans and Drosophila melanogaster

Judith Kimble, Christiane Nüsslein-Volhard

Dev Biol. Author manuscript; available in PMC 2022 May 11.

Published in final edited form as: Dev Biol. 2022 May; 485: 93–122. Published online 2022 Mar 2. doi: 10.1016/j.ydbio.2022.02.013

PMCID:: PMC9092520

Abstract Article PDF–4.9M

Select item 886329717.

Transcriptional Regulators of Ecdysteroid Biosynthetic Enzymes and Their Roles in Insect Development

Takumi Kamiyama, Ryusuke Niwa

Front Physiol. 2022; 13: 823418. Published online 2022 Feb 8. doi: 10.3389/fphys.2022.823418

PMCID:: PMC8863297

Abstract Article PDF–1.4M

Select item 872236718.

Mechanistic Gene Networks Inferred from Single-Cell Data with an Outlier-Insensitive Method

Jung Min Han, Sudheesha Perera, Zeba Wunderlich, Vipul Periwal

Math Biosci. Author manuscript; available in PMC 2022 Dec 1.

Published in final edited form as: Math Biosci. 2021 Dec; 342: 108722. Published online 2021 Oct 21. doi: 10.1016/j.mbs.2021.108722

PMCID:: PMC8722367

Abstract Article PDF–3.8M

Select item 866448619.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349