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Items: 1 to 20 of 32

1.
Age-Related Changes of Gene Expression Profiles in Drosophila
Guillaume Bordet, Niraj Lodhi, Andrew Kossenkov, Alexei Tulin
Genes (Basel) 2021 Dec; 12(12): 1982. Published online 2021 Dec 14. doi: 10.3390/genes12121982
PMCID:
PMC8701748
AbstractArticlePDF–2.3M
2.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
3.
Proximity labeling reveals novel interactomes in live Drosophila tissue
Katelynn M. Mannix, Rebecca M. Starble, Ronit S. Kaufman, Lynn Cooley
Development. 2019 Jul 15; 146(14): dev176644. Published online 2019 Jul 18. doi: 10.1242/dev.176644
PMCID:
PMC6679357
AbstractArticle
4.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
5.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
6.
Transcriptome Analysis of Drosophila melanogaster Third Instar Larval Ring Glands Points to Novel Functions and Uncovers a Cytochrome p450 Required for Development
Danielle Christesen, Ying Ting Yang, Jason Somers, Charles Robin, Tamar Sztal, Philip Batterham, Trent Perry
G3 (Bethesda) 2017 Feb; 7(2): 467–479. Published online 2016 Dec 13. doi: 10.1534/g3.116.037333
PMCID:
PMC5295594
AbstractArticlePDF–1.6M
7.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
8.
SUMO-Enriched Proteome for Drosophila Innate Immune Response
Mithila Handu, Bhagyashree Kaduskar, Ramya Ravindranathan, Amarendranath Soory, Ritika Giri, Vijay Barathi Elango, Harsha Gowda, Girish S. Ratnaparkhi
G3 (Bethesda) 2015 Oct; 5(10): 2137–2154. Published online 2015 Aug 18. doi: 10.1534/g3.115.020958
PMCID:
PMC4592996
AbstractArticlePDF–2.0M
9.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
10.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
11.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
12.
Whole-Genome Expression Analysis in the Third Instar Larval Midgut of Drosophila melanogaster
Thomas W. R. Harrop, Stephen L. Pearce, Phillip J. Daborn, Philip Batterham
G3 (Bethesda) 2014 Nov; 4(11): 2197–2205. Published online 2014 Sep 5. doi: 10.1534/g3.114.013870
PMCID:
PMC4232545
AbstractArticlePDF–1.6M
13.
The Molecular Evolution of Cytochrome P450 Genes within and between Drosophila Species
Robert T. Good, Lydia Gramzow, Paul Battlay, Tamar Sztal, Philip Batterham, Charles Robin
Genome Biol Evol. 2014 May; 6(5): 1118–1134. Published online 2014 Apr 20. doi: 10.1093/gbe/evu083
PMCID:
PMC4040991
AbstractArticlePDF–690K
14.
p120 Catenin Is Required for the Stress Response in Drosophila
Rhoda K. Stefanatos, Christin Bauer, Marcos Vidal
PLoS One. 2013; 8(12): e83942. Published online 2013 Dec 12. doi: 10.1371/journal.pone.0083942
PMCID:
PMC3861524
AbstractArticlePDF–2.3M
15.
Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster
Joshua G Dunn, Catherine K Foo, Nicolette G Belletier, Elizabeth R Gavis, Jonathan S Weissman
eLife. 2013; 2: e01179. Published online 2013 Dec 3. doi: 10.7554/eLife.01179
Correction in:
eLife. 2014; 3: e03178.
PMCID:
PMC3840789
AbstractArticlePDF–4.2M
16.
The 5′-3′ exoribonuclease Pacman (Xrn1) regulates expression of the heat shock protein Hsp67Bc and the microRNA miR-277–3p in Drosophila wing imaginal discs
Christopher I Jones, Dominic P Grima, Joseph A Waldron, Sue Jones, Hannah N Parker, Sarah F Newbury
RNA Biol. 2013 Aug 1; 10(8): 1345–1355. Published online 2013 Jun 13. doi: 10.4161/rna.25354
PMCID:
PMC3817156
AbstractArticlePDF–1.3M
17.
The Drosophila melanogaster Genetic Reference Panel
Trudy F. C. Mackay, Stephen Richards, Eric A. Stone, Antonio Barbadilla, Julien F. Ayroles, Dianhui Zhu, Sònia Casillas, Yi Han, Michael M. Magwire, Julie M. Cridland, Mark F. Richardson, Robert R. H. Anholt, Maite Barrón, Crystal Bess, Kerstin Petra Blankenburg, Mary Anna Carbone, David Castellano, Lesley Chaboub, Laura Duncan, Zeke Harris, Mehwish Javaid, Joy Christina Jayaseelan, Shalini N. Jhangiani, Katherine W. Jordan, Fremiet Lara, Faye Lawrence, Sandra L. Lee, Pablo Librado, Raquel S. Linheiro, Richard F. Lyman, Aaron J. Mackey, Mala Munidasa, Donna Marie Muzny, Lynne Nazareth, Irene Newsham, Lora Perales, Ling-Ling Pu, Carson Qu, Miquel Ràmia, Jeffrey G. Reid, Stephanie M. Rollmann, Julio Rozas, Nehad Saada, Lavanya Turlapati, Kim C. Worley, Yuan-Qing Wu, Akihiko Yamamoto, Yiming Zhu, Casey M. Bergman, Kevin R. Thornton, David Mittelman, Richard A. Gibbs
Nature. Author manuscript; available in PMC 2013 Jun 17.
Published in final edited form as: Nature. 2012 Feb 9; 482(7384): 173–178. Published online 2012 Feb 8. doi: 10.1038/nature10811
PMCID:
PMC3683990
AbstractArticlePDF–1016K
18.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
19.
The Many Landscapes of Recombination in Drosophila melanogaster
Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin
PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905
PMCID:
PMC3469467
AbstractArticlePDF–1.6M
20.
A Protein Complex Network of Drosophila melanogaster
K. G. Guruharsha, J. -F. Rual, B. Zhai, J. Mintseris, P. Vaidya, N. Vaidya, C. Beekman, C. Wong, D. Y. Rhee, O. Cenaj, E. McKillip, S. Shah, M. Stapleton, K. H. Wan, C. Yu, B. Parsa, J. W. Carlson, X. Chen, B. Kapadia, K. VijayRaghavan, S. P. Gygi, S. E. Celniker, R. A. Obar, S. Artavanis-Tsakonas
Cell. Author manuscript; available in PMC 2012 Oct 28.
Published in final edited form as: Cell. 2011 Oct 28; 147(3): 690–703. doi: 10.1016/j.cell.2011.08.047
PMCID:
PMC3319048
AbstractArticlePDF–3.2M

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