PMC Links for GEO Profiles (Select 5405788) - PMC

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 39929437.

Building the bacterial orisome: high affinity DnaA recognition plays a role in setting the conformation of oriC DNA

Gulpreet Kaur, Mansi P. Vora, Christopher A. Czerwonka, Tania A. Rozgaja, Julia E. Grimwade, Alan C. Leonard

Mol Microbiol. Author manuscript; available in PMC 2015 Mar 1.

Published in final edited form as: Mol Microbiol. 2014 Mar; 91(6): 1148–1163. Published online 2014 Feb 18. doi: 10.1111/mmi.12525

PMCID:: PMC3992943

Abstract Article PDF–2.8M

Select item 38651828.

The Fis Protein Has a Stimulating Role in Initiation of Replication in Escherichia coli In Vivo

Ingvild Flåtten, Kirsten Skarstad

PLoS One. 2013; 8(12): e83562. Published online 2013 Dec 16. doi: 10.1371/journal.pone.0083562

PMCID:: PMC3865182

Abstract Article PDF–1.0M

Select item 35478289.

E. coli Fis Protein Insulates the cbpA Gene from Uncontrolled Transcription

Kiran Chintakayala, Shivani S. Singh, Amanda E. Rossiter, Rajesh Shahapure, Remus T. Dame, David C. Grainger

PLoS Genet. 2013 Jan; 9(1): e1003152. Published online 2013 Jan 17. doi: 10.1371/journal.pgen.1003152

PMCID:: PMC3547828

Abstract Article PDF–834K

Select item 337887710.

Silencing of toxic gene expression by Fis

Shweta Karambelkar, Ganduri Swapna, Valakunja Nagaraja

Nucleic Acids Res. 2012 May; 40(10): 4358–4367. Published online 2012 Jan 28. doi: 10.1093/nar/gks037

PMCID:: PMC3378877

Abstract Article PDF–3.6M

Select item 306480811.

Direct and indirect effects of H-NS and Fis on global gene expression control in Escherichia coli

Christina Kahramanoglou, Aswin S. N. Seshasayee, Ana I. Prieto, David Ibberson, Sabine Schmidt, Jurgen Zimmermann, Vladimir Benes, Gillian M. Fraser, Nicholas M. Luscombe

Nucleic Acids Res. 2011 Mar; 39(6): 2073–2091. Published online 2010 Nov 20. doi: 10.1093/nar/gkq934

PMCID:: PMC3064808

Abstract Article PDF–2.3M

Select item 288567112.

Downregulation of the Escherichia coli guaB promoter by FIS

Seyyed I. Husnain, Mark S. Thomas

Microbiology (Reading) 2008 Jun; 154(Pt 6): 1729–1738. doi: 10.1099/mic.0.2008/016774-0

PMCID:: PMC2885671

Abstract Article PDF–410K

Select item 283805613.

Role of Decreased Levels of Fis Histone-Like Protein in Crohn's Disease-Associated Adherent Invasive Escherichia coli LF82 Bacteria Interacting with Intestinal Epithelial Cells

Sylvie Miquel, Laurent Claret, Richard Bonnet, Imen Dorboz, Nicolas Barnich, Arlette Darfeuille-Michaud

J Bacteriol. 2010 Apr; 192(7): 1832–1843. Published online 2010 Jan 29. doi: 10.1128/JB.01679-09

PMCID:: PMC2838056

Abstract Article PDF–1.3M

Select item 267296414.

Synergistic role of curli and cellulose in cell adherence and biofilm formation of attaching and effacing Escherichia coli and identification of Fis as a negative regulator of curli

Zeus Saldaña, Juan Xicohtencatl-Cortes, Fabiola Avelino, Alan D. Phillips, James B. Kaper, José L. Puente, Jorge A. Girón

Environ Microbiol. Author manuscript; available in PMC 2010 Apr 1.

Published in final edited form as: Environ Microbiol. 2009 Apr; 11(4): 992–1006. Published online 2009 Nov 14. doi: 10.1111/j.1462-2920.2008.01824.x

PMCID:: PMC2672964

Abstract Article PDF–2.7M

Select item 267261415.

Global Functional Atlas of Escherichia coli Encompassing Previously Uncharacterized Proteins

Pingzhao Hu, Sarath Chandra Janga, Mohan Babu, J. Javier Díaz-Mejía, Gareth Butland, Wenhong Yang, Oxana Pogoutse, Xinghua Guo, Sadhna Phanse, Peter Wong, Shamanta Chandran, Constantine Christopoulos, Anaies Nazarians-Armavil, Negin Karimi Nasseri, Gabriel Musso, Mehrab Ali, Nazila Nazemof, Veronika Eroukova, Ashkan Golshani, Alberto Paccanaro, Jack F Greenblatt, Gabriel Moreno-Hagelsieb, Andrew Emili

PLoS Biol. 2009 Apr; 7(4): e1000096. Published online 2009 Apr 28. doi: 10.1371/journal.pbio.1000096

PMCID:: PMC2672614

Abstract Article

Select item 265565816.

DNA sampling: a method for probing protein binding at specific loci on bacterial chromosomes

Matej Butala, Stephen J. W. Busby, David J. Lee

Nucleic Acids Res. 2009 Apr; 37(5): e37. Published online 2009 Jan 30. doi: 10.1093/nar/gkp043

PMCID:: PMC2655658

Abstract Article PDF–4.3M

Select item 263387017.

Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks

John P. Rooney, Ajish D. George, Ashish Patil, Ulrike Begley, Erin Bessette, Maria R. Zappala, Xin Huang, Douglas A. Conklin, Richard P. Cunningham, Thomas J. Begley

Genomics. Author manuscript; available in PMC 2010 Jan 1.

Published in final edited form as: Genomics. 2009 Jan; 93(1): 42–51. Published online 2008 Oct 16. doi: 10.1016/j.ygeno.2008.09.001

PMCID:: PMC2633870

Abstract Article PDF–1.9M

Select item 257666018.

Hypernegative Supercoiling Inhibits Growth by Causing RNA Degradation

Imad Baaklini, Valentine Usongo, Flora Nolent, Patrick Sanscartier, Chadi Hraiky, Karl Drlica, Marc Drolet

J Bacteriol. 2008 Nov; 190(22): 7346–7356. Published online 2008 Sep 12. doi: 10.1128/JB.00680-08

PMCID:: PMC2576660

Abstract Article PDF–1.0M

Select item 251705319.

Biochemical identification of base and phosphate contacts between Fis and a high affinity DNA binding site

Yongping Shao, Leah S. Feldman-Cohen, Robert Osuna

J Mol Biol. Author manuscript; available in PMC 2009 Jul 4.

Published in final edited form as: J Mol Biol. 2008 Jul 4; 380(2): 327–339. Published online 2008 May 7. doi: 10.1016/j.jmb.2008.04.075

PMCID:: PMC2517053

Abstract Article PDF–2.4M

Select item 249309220.

Role of Global Regulators and Nucleotide Metabolism in Antibiotic Tolerance in Escherichia coli

Sonja Hansen, Kim Lewis, Marin Vulić

Antimicrob Agents Chemother. 2008 Aug; 52(8): 2718–2726. Published online 2008 Jun 2. doi: 10.1128/AAC.00144-08

PMCID:: PMC2493092

Abstract Article PDF–398K

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