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Select item 86053661.

From a dimer to a monomer: Construction of a chimeric monomeric isocitrate dehydrogenase

Changqing Tian, Bin Wen, Mingjie Bian, Mingming Jin, Peng Wang, Lei Xu, Guoping Zhu

Protein Sci. 2021 Dec; 30(12): 2396–2407. Published online 2021 Oct 23. doi: 10.1002/pro.4204

PMCID:: PMC8605366

Abstract Article PDF–5.2M

Select item 63668612.

Affinity-based capture and identification of protein effectors of the growth regulator ppGpp

Boyuan Wang, Peng Dai, David Ding, Amanda Del Rosario, Robert A. Grant, Bradley L. Pentelute, Michael T. Laub

Nat Chem Biol. Author manuscript; available in PMC 2019 Jun 17.

Published in final edited form as: Nat Chem Biol. 2019 Feb; 15(2): 141–150. Published online 2018 Dec 17. doi: 10.1038/s41589-018-0183-4

Correction in:: Nat Chem Biol. 2019 May 10

PMCID:: PMC6366861

Abstract Article PDF–2.2M

Select item 41238553.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 40548404.

Inferring gene function from evolutionary change in signatures of translation efficiency

Anita Krisko, Tea Copic, Toni Gabaldón, Ben Lehner, Fran Supek

Genome Biol. 2014; 15(3): R44. Published online 2014 Mar 3. doi: 10.1186/gb-2014-15-3-r44

PMCID:: PMC4054840

Abstract Article PDF–2.2M

Select item 36408695.

An SOD mimic protects NADP⁺-dependent isocitrate dehydrogenase against oxidative inactivation

Ines Batinic-Haberle, Ludmil T. Benov

Free Radic Res. Author manuscript; available in PMC 2013 May 1.

Published in final edited form as: Free Radic Res. 2008 Jul; 42(7): 618–624. doi: 10.1080/10715760802209639

PMCID:: PMC3640869

Abstract Article PDF–2.9M

Select item 35814276.

Dimerization and Bifunctionality Confer Robustness to the Isocitrate Dehydrogenase Regulatory System in Escherichia coli

Joseph P. Dexter, Jeremy Gunawardena

J Biol Chem. 2013 Feb 22; 288(8): 5770–5778. Published online 2012 Nov 28. doi: 10.1074/jbc.M112.339226

PMCID:: PMC3581427

Abstract Article PDF–1.4M

Select item 30652067.

Identification of lysine succinylation as a new post-translational modification

Zhihong Zhang, Minjia Tan, Zhongyu Xie, Lunzhi Dai, Yue Chen, Tingming Zhao

Nat Chem Biol. Author manuscript; available in PMC 2011 Mar 28.

Published in final edited form as: Nat Chem Biol. 2011 Jan; 7(1): 58–63. Published online 2010 Dec 12. doi: 10.1038/nchembio.495

PMCID:: PMC3065206

Abstract Article PDF–826K

Select item 26345808.

Lysine Acetylation Is a Highly Abundant and Evolutionarily Conserved Modification in Escherichia Coli

Junmei Zhang, Robert Sprung, Jimin Pei, Xiaohong Tan, Sungchan Kim, Heng Zhu, Chuan-Fa Liu, Nick V. Grishin, Yingming Zhao

Mol Cell Proteomics. 2009 Feb; 8(2): 215–225. doi: 10.1074/mcp.M800187-MCP200

PMCID:: PMC2634580

Abstract Article PDF–262K

Select item 22921779.

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102

PMCID:: PMC2292177

Abstract Article PDF–1.0M

Select item 214334010.

Determinants of performance in the isocitrate dehydrogenase of Escherichia coli.

A. M. Dean, A. K. Shiau, D. E. Koshland, Jr

Protein Sci. 1996 Feb; 5(2): 341–347. doi: 10.1002/pro.5560050218

PMCID:: PMC2143340

Summary PDF–1.4M

Select item 214333811.

Second-site suppression of regulatory phosphorylation in Escherichia coli isocitrate dehydrogenase.

R. Chen, J. A. Grobler, J. H. Hurley, A. M. Dean

Protein Sci. 1996 Feb; 5(2): 287–295. doi: 10.1002/pro.5560050213

PMCID:: PMC2143338

Summary PDF–2.2M

Select item 179728912.

Role of Phosphoenolpyruvate in the NADP-Isocitrate Dehydrogenase and Isocitrate Lyase Reaction in Escherichia coli

Tadashi Ogawa, Keiko Murakami, Hirotada Mori, Nobuyoshi Ishii, Masaru Tomita, Masataka Yoshin

J Bacteriol. 2007 Feb; 189(3): 1176–1178. Published online 2006 Dec 1. doi: 10.1128/JB.01628-06

PMCID:: PMC1797289

Abstract Article PDF–124K

Select item 169820913.

Experimental and Computational Assessment of Conditionally Essential Genes in Escherichia coli

Andrew R. Joyce, Jennifer L. Reed, Aprilfawn White, Robert Edwards, Andrei Osterman, Tomoya Baba, Hirotada Mori, Scott A. Lesely, Bernhard Ø. Palsson, Sanjay Agarwalla

J Bacteriol. 2006 Dec; 188(23): 8259–8271. Published online 2006 Sep 29. doi: 10.1128/JB.00740-06

PMCID:: PMC1698209

Abstract Article PDF–779K

Select item 168148114.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 132520015.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405