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Items: 1 to 20 of 106

1.
P4-ATPase endosomal recycling relies on multiple retromer-dependent localization signals
Mariana Jiménez, Claire K. Kyoung, Kateryna Nabukhotna, Davia Watkins, Bhawik K. Jain, Jordan T. Best, Todd R. Graham
Mol Biol Cell. 2024 Oct 1; 35(10): ar125. Published online 2024 Sep 20. doi: 10.1091/mbc.E24-05-0209
PMCID:
PMC11481694
AbstractArticlePDF–2.0M
2.
An APEX2-based proximity-dependent biotinylation assay with temporal specificity to study protein interactions during autophagy in the yeast Saccharomyces cerevisiae
Yasmina Filali-Mouncef, Alexandre Leytens, Prado Vargas Duarte, Mattia Zampieri, Jörn Dengjel, Fulvio Reggiori
Autophagy. 2024; 20(10): 2323–2337. Published online 2024 Jul 3. doi: 10.1080/15548627.2024.2366749
PMCID:
PMC11423678
AbstractArticlePDF–1.7M
3.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
4.
Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking
Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan
J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047
PMCID:
PMC10798858
AbstractArticlePDF–6.4M
5.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
6.
The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions
Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman
Mol Cell. Author manuscript; available in PMC 2024 Jun 15.
Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021
PMCID:
PMC10297700
AbstractArticlePDF–2.0M
7.
Retromer oligomerization drives SNX‐BAR coat assembly and membrane constriction
Navin Gopaldass, Maria Giovanna De Leo, Thibault Courtellemont, Vincent Mercier, Christin Bissig, Aurélien Roux, Andreas Mayer
EMBO J. 2023 Jan; 42(2): e112287. Published online 2023 Jan 16. doi: 10.15252/embj.2022112287
PMCID:
PMC9841331
AbstractArticlePDF–3.4M
8.
A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast
Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger
G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296
PMCID:
PMC9836348
AbstractArticlePDF–857K
9.
Vacuole fragmentation depends on a novel Atg18-containing retromer-complex
Lisa Marquardt, Matthew Taylor, Florian Kramer, Kerstin Schmitt, Gerhard H. Braus, Oliver Valerius, Michael Thumm
Autophagy. 2023; 19(1): 278–295. Published online 2022 May 15. doi: 10.1080/15548627.2022.2072656
PMCID:
PMC9809942
AbstractArticlePDF–5.1M
10.
A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans
Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor
Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136
PMCID:
PMC9630986
AbstractArticlePDF–2.2M
11.
The VINE complex is an endosomal VPS9-domain GEF and SNX-BAR coat
Shawn P Shortill, Mia S Frier, Ponthakorn Wongsangaroonsri, Michael Davey, Elizabeth Conibear
eLife. 2022; 11: e77035. Published online 2022 Aug 8. doi: 10.7554/eLife.77035
PMCID:
PMC9507130
AbstractArticlePDF–6.1M
12.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
13.
CROP: a retromer‐PROPPIN complex mediating membrane fission in the endo‐lysosomal system
Thibault Courtellemont, Maria Giovanna De Leo, Navin Gopaldass, Andreas Mayer
EMBO J. 2022 May; 41(10): e109646. Published online 2022 Apr 25. doi: 10.15252/embj.2021109646
PMCID:
PMC9108610
AbstractArticlePDF–8.1M
14.
A PX-BAR protein Mvp1/SNX8 and a dynamin-like GTPase Vps1 drive endosomal recycling
Sho W Suzuki, Akihiko Oishi, Nadia Nikulin, Jeff R Jorgensen, Matthew G Baile, Scott D Emr
eLife. 2021; 10: e69883. Published online 2021 Sep 15. doi: 10.7554/eLife.69883
PMCID:
PMC8504969
AbstractArticlePDF–13M
15.
Elevating PI3P drives select downstream membrane trafficking pathways
Noah Steinfeld, Vikramjit Lahiri, Anna Morrison, Shree Padma Metur, Daniel J. Klionsky, Lois S. Weisman
Mol Biol Cell. 2021 Jan 15; 32(2): 143–156. doi: 10.1091/mbc.E20-03-0191
PMCID:
PMC8120694
AbstractArticlePDF–3.3M
16.
Expression attenuation as a mechanism of robustness against gene duplication
Diana Ascencio, Guillaume Diss, Isabelle Gagnon-Arsenault, Alexandre K. Dubé, Alexander DeLuna, Christian R. Landry
Proc Natl Acad Sci U S A. 2021 Feb 9; 118(6): e2014345118. Published online 2021 Feb 1. doi: 10.1073/pnas.2014345118
PMCID:
PMC7970654
AbstractArticlePDF–9.9M
17.
Analysis of the TORC1 interactome reveals a spatially distinct function of TORC1 in mRNP complexes
Yeonji Chang, Gyubum Lim, Won-Ki Huh
J Cell Biol. 2021 Apr 5; 220(4): e201912060. Published online 2021 Feb 10. doi: 10.1083/jcb.201912060
PMCID:
PMC7879482
AbstractArticlePDF–5.9M
18.
The retromer is co-opted to deliver lipid enzymes for the biogenesis of lipid-enriched tombusviral replication organelles
Zhike Feng, Jun-ichi Inaba, Peter D. Nagy
Proc Natl Acad Sci U S A. 2021 Jan 5; 118(1): e2016066118. Published online 2020 Dec 29. doi: 10.1073/pnas.2016066118
PMCID:
PMC7817191
AbstractArticlePDF–2.6M
19.
AP‐3 vesicle uncoating occurs after HOPS‐dependent vacuole tethering
Jannis Schoppe, Muriel Mari, Erdal Yavavli, Kathrin Auffarth, Margarita Cabrera, Stefan Walter, Florian Fröhlich, Christian Ungermann
EMBO J. 2020 Oct 15; 39(20): e105117. Published online 2020 Aug 25. doi: 10.15252/embj.2020105117
PMCID:
PMC7560216
AbstractArticlePDF–3.6M
20.
Yeast synaptobrevin, Snc1, engages distinct routes of postendocytic recycling mediated by a sorting nexin, Rcy1-COPI, and retromer
Jordan T. Best, Peng Xu, Jack G. McGuire, Shannon N. Leahy, Todd R. Graham
Mol Biol Cell. 2020 Apr 15; 31(9): 944–962. doi: 10.1091/mbc.E19-05-0290
PMCID:
PMC7185969
AbstractArticlePDF–4.0M

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