PMC Links for GEO Profiles (Select 54590768) - PMC

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Items: 18

Select item 98363481.

A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast

Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger

G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296

PMCID:: PMC9836348

Abstract Article PDF–857K

Select item 92098112.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 68594223.

Transcriptomic and chemogenomic analyses unveil the essential role of Com2-regulon in response and tolerance of Saccharomyces cerevisiae to stress induced by sulfur dioxide

Patrícia Lage, Belém Sampaio-Marques, Paula Ludovico, Nuno P. Mira, Ana Mendes-Ferreira

Microb Cell. 2019 Nov 4; 6(11): 509–523. Published online 2019 Sep 30. doi: 10.15698/mic2019.11.697

PMCID:: PMC6859422

Abstract Article PDF–1.2M

Select item 54845444.

The yeast protein kinase Sch9 adjusts V-ATPase assembly/disassembly to control pH homeostasis and longevity in response to glucose availability

Tobias Wilms, Erwin Swinnen, Elja Eskes, Laura Dolz-Edo, Alice Uwineza, Ruben Van Essche, Joëlle Rosseels, Piotr Zabrocki, Elisabetta Cameroni, Vanessa Franssens, Claudio De Virgilio, Gertien J. Smits, Joris Winderickx

PLoS Genet. 2017 Jun; 13(6): e1006835. Published online 2017 Jun 12. doi: 10.1371/journal.pgen.1006835

PMCID:: PMC5484544

Abstract Article PDF–14M

Select item 54351395.

A systematic genetic screen for genes involved in sensing inorganic phosphate availability in Saccharomyces cerevisiae

Joonhyuk Choi, Abbhirami Rajagopal, Yi-Fan Xu, Joshua D. Rabinowitz, Erin K. O’Shea

PLoS One. 2017; 12(5): e0176085. Published online 2017 May 17. doi: 10.1371/journal.pone.0176085

PMCID:: PMC5435139

Abstract Article PDF–1.9M

Select item 52043486.

A novel translational control mechanism involving RNA structures within coding sequences

Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez

Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116

Correction in:: Genome Res. 2017 Apr; 27(4): 663.

PMCID:: PMC5204348

Abstract Article PDF–1.3M

Select item 50550837.

Functional Metabolomics Describes the Yeast Biosynthetic Regulome

Michael Mülleder, Enrica Calvani, Mohammad Tauqeer Alam, Richard Kangda Wang, Florian Eckerstorfer, Aleksej Zelezniak, Markus Ralser

Cell. 2016 Oct 6; 167(2): 553–565.e12. doi: 10.1016/j.cell.2016.09.007

PMCID:: PMC5055083

Abstract Article PDF–3.9M

Select item 47079528.

Protein-RNA networks revealed through covalent RNA marks

Christopher P. Lapointe, Daniel Wilinski, Harriet A. J. Saunders, Marvin Wickens

Nat Methods. Author manuscript; available in PMC 2016 May 18.

Published in final edited form as: Nat Methods. 2015 Dec; 12(12): 1163–1170. Published online 2015 Nov 2. doi: 10.1038/nmeth.3651

PMCID:: PMC4707952

Abstract Article PDF–856K

Select item 46648829.

Saccharomyces cerevisiae Is Dependent on Vesicular Traffic between the Golgi Apparatus and the Vacuole When Inositolphosphorylceramide Synthase Aur1 Is Inactivated

Natalia S. Voynova, Carole Roubaty, Hector M. Vazquez, Shamroop K. Mallela, Christer S. Ejsing, Andreas Conzelmann

Eukaryot Cell. 2015 Dec; 14(12): 1203–1216. Prepublished online 2015 Oct 2. Published online 2015 Nov 30. doi: 10.1128/EC.00117-15

PMCID:: PMC4664882

Abstract Article PDF–2.3M

Select item 456984210.

Modular pathway rewiring of Saccharomyces cerevisiae enables high-level production of L-ornithine

Jiufu Qin, Yongjin J. Zhou, Anastasia Krivoruchko, Mingtao Huang, Lifang Liu, Sakda Khoomrung, Verena Siewers, Bo Jiang, Jens Nielsen

Nat Commun. 2015; 6: 8224. Published online 2015 Sep 8. doi: 10.1038/ncomms9224

PMCID:: PMC4569842

Abstract Article PDF–551K

Select item 379280711.

A Ham1p-Dependent Mechanism and Modulation of the Pyrimidine Biosynthetic Pathway Can Both Confer Resistance to 5-Fluorouracil in Yeast

Mattias Carlsson, Marie Gustavsson, Guo-Zhen Hu, Eva Murén, Hans Ronne

PLoS One. 2013; 8(10): e52094. Published online 2013 Oct 4. doi: 10.1371/journal.pone.0052094

Correction in:: PLoS One. 2013; 8(11): 10.1371/annotation/fe863e39-ab49-40e2-b262-0219428de65e.

PMCID:: PMC3792807

Abstract Article PDF–1.1M

Select item 319815612.

A mitochondrial-focused genetic interaction map reveals a scaffold-like complex required for inner membrane organization in mitochondria

Suzanne Hoppins, Sean R. Collins, Ann Cassidy-Stone, Eric Hummel, Rachel M. DeVay, Laura L. Lackner, Benedikt Westermann, Maya Schuldiner, Jonathan S. Weissman, Jodi Nunnari

J Cell Biol. 2011 Oct 17; 195(2): 323–340. doi: 10.1083/jcb.201107053

PMCID:: PMC3198156

Abstract Article PDF–4.1M

Select item 312543913.

An integrated approach to characterize genetic interaction networks in yeast metabolism

Balázs Szappanos, Károly Kovács, Béla Szamecz, Frantisek Honti, Michael Costanzo, Anastasia Baryshnikova, Gabriel Gelius-Dietrich, Martin J. Lercher, Márk Jelasity, Chad L. Myers, Brenda J. Andrews, Charles Boone, Stephen G. Oliver, Csaba Pál, Balázs Papp

Nat Genet. Author manuscript; available in PMC 2012 Jan 1.

Published in final edited form as: Nat Genet. 2011 Jul; 43(7): 656–662. Published online 2011 May 29. doi: 10.1038/ng.846

PMCID:: PMC3125439

Abstract Article PDF–2.5M

Select item 306367114.

A Genome-Wide Enhancer Screen Implicates Sphingolipid Composition in Vacuolar ATPase Function in Saccharomyces cerevisiae

Gregory C. Finnigan, Margret Ryan, Tom H. Stevens

Genetics. 2011 Mar; 187(3): 771–783. doi: 10.1534/genetics.110.125567

PMCID:: PMC3063671

Abstract Article PDF–1.5M

Select item 299638215.

A genomic approach highlights common and diverse effects and determinants of susceptibility on the yeast Saccharomyces cerevisiae exposed to distinct antimicrobial peptides

Belén López-García, Mónica Gandía, Alberto Muñoz, Lourdes Carmona, Jose F Marcos

BMC Microbiol. 2010; 10: 289. Published online 2010 Nov 15. doi: 10.1186/1471-2180-10-289

PMCID:: PMC2996382

Abstract Article PDF–2.4M

Select item 222536316.

Crystallization of ornithine acetyltransferase from yeast by counter-diffusion and preliminary X-ray study

Dominique Maes, Marjolaine Crabeel, Cécile Van de Weerdt, Joseph Martial, Eveline Peeters, Daniël Charlier, Klaas Decanniere, Celine Vanhee, Lode Wyns, Ingrid Zegers

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Dec 1; 62(Pt 12): 1294–1297. Published online 2006 Nov 30. doi: 10.1107/S1744309106050561

PMCID:: PMC2225363

Abstract Article PDF–321K

Select item 120816917.

Large Scale Identification of Genes Involved in Cell Surface Biosynthesis and Architecture in Saccharomyces Cerevisiae

M. Lussier, A. M. White, J. Sheraton, T. di-Paolo, J. Treadwell, S. B. Southard, C. I. Horenstein, J. Chen-Weiner, AFJ. Ram, J. C. Kapteyn, T. W. Roemer, D. H. Vo, D. C. Bondoc, J. Hall, W. Wei Zhong, A. M. Sdicu, J. Davies, F. M. Klis, P. W. Robbins, H. Bussey

Genetics. 1997 Oct; 147(2): 435–450. doi: 10.1093/genetics/147.2.435