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Items: 1 to 20 of 38

1.
The microbiome stabilizes circadian rhythms in the gut
Yueliang Zhang, Yongjun Li, Annika F. Barber, Sara B. Noya, Julie A. Williams, Fu Li, Scott G. Daniel, Kyle Bittinger, Jichao Fang, Amita Sehgal
Proc Natl Acad Sci U S A. 2023 Jan 31; 120(5): e2217532120. Published online 2023 Jan 23. doi: 10.1073/pnas.2217532120
PMCID:
PMC9945975
AbstractArticlePDF–3.9M
2.
De novo apical domain formation inside the Drosophila adult midgut epithelium
Jia Chen, Daniel St Johnston
eLife. 2022; 11: e76366. Published online 2022 Sep 28. doi: 10.7554/eLife.76366
PMCID:
PMC9545526
AbstractArticlePDF–14M
3.
Comprehensive Identification and Alternative Splicing of Microexons in Drosophila
Ting-Lin Pang, Zhan Ding, Shao-Bo Liang, Liang Li, Bei Zhang, Yu Zhang, Yu-Jie Fan, Yong-Zhen Xu
Front Genet. 2021; 12: 642602. Published online 2021 Mar 30. doi: 10.3389/fgene.2021.642602
PMCID:
PMC8042270
AbstractArticlePDF–3.6M
4.
High-Frequency Neuronal Bursting is Essential for Circadian and Sleep Behaviors in Drosophila
Florencia Fernandez-Chiappe, Lia Frenkel, Carina Celeste Colque, Ana Ricciuti, Bryan Hahm, Karina Cerredo, Nara Inés Muraro, María Fernanda Ceriani
J Neurosci. 2021 Jan 27; 41(4): 689–710. doi: 10.1523/JNEUROSCI.2322-20.2020
PMCID:
PMC7842748
AbstractArticlePDF–4.2M
5.
A single-cell atlas and lineage analysis of the adult Drosophila ovary
Katja Rust, Lauren E. Byrnes, Kevin Shengyang Yu, Jason S. Park, Julie B. Sneddon, Aaron D. Tward, Todd G. Nystul
Nat Commun. 2020; 11: 5628. Published online 2020 Nov 6. doi: 10.1038/s41467-020-19361-0
Correction in:
Nat Commun. 2021; 12: 5951.
PMCID:
PMC7648648
AbstractArticlePDF–6.1M
6.
Drak/STK17A drives neoplastic glial proliferation through modulation of MRLC signaling
Alexander S. Chen, Joanna Wardwell-Ozgo, Nilang N. Shah, Deidre Wright, Christina L. Appin, Krishanthan Vigneswaran, Daniel J. Brat, Harley I. Kornblum, Renee D. Read
Cancer Res. Author manuscript; available in PMC 2020 Jul 7.
Published in final edited form as: Cancer Res. 2019 Mar 15; 79(6): 1085–1097. Published online 2018 Dec 10. doi: 10.1158/0008-5472.CAN-18-0482
PMCID:
PMC7339754
AbstractArticlePDF–2.9M
7.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
8.
Rapid metabolic shifts occur during the transition between hunger and satiety in Drosophila melanogaster
Daniel Wilinski, Jasmine Winzeler, William Duren, Jenna L. Persons, Kristina J. Holme, Johan Mosquera, Morteza Khabiri, Jason M. Kinchen, Peter L. Freddolino, Alla Karnovsky, Monica Dus
Nat Commun. 2019; 10: 4052. Published online 2019 Sep 6. doi: 10.1038/s41467-019-11933-z
PMCID:
PMC6731244
AbstractArticlePDF–1.6M
9.
The Trithorax group protein dMLL3/4 instructs the assembly of the zygotic genome at fertilization
Pedro Prudêncio, Leonardo G Guilgur, João Sobral, Jörg D Becker, Rui Gonçalo Martinho, Paulo Navarro‐Costa
EMBO Rep. 2018 Aug; 19(8): e45728. Published online 2018 Jul 23. doi: 10.15252/embr.201845728
PMCID:
PMC6073209
AbstractArticlePDF–1.9M
10.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
11.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
12.
Probing the canonicity of the Wnt/Wingless signaling pathway
Alexandra Franz, Daria Shlyueva, Erich Brunner, Alexander Stark, Konrad Basler
PLoS Genet. 2017 Apr; 13(4): e1006700. Published online 2017 Apr 3. doi: 10.1371/journal.pgen.1006700
PMCID:
PMC5393890
AbstractArticlePDF–2.1M
13.
Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster
Punita Juneja, Andrew Quinn, Francis M. Jiggins
BMC Genomics. 2016; 17: 981. Published online 2016 Nov 28. doi: 10.1186/s12864-016-3333-7
PMCID:
PMC5126864
AbstractArticlePDF–1.1M
14.
Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome
Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair
Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999
PMCID:
PMC4928047
AbstractArticlePDF–3.1M
15.
A Direct Role for Cohesin in Gene Regulation and Ecdysone Response in Drosophila Salivary Glands
Andrea Pauli, Joke G. van Bemmel, Raquel A. Oliveira, Takehiko Itoh, Katsuhiko Shirahige, Bas van Steensel, Kim Nasmyth
Curr Biol. Author manuscript; available in PMC 2016 Feb 23.
Published in final edited form as: Curr Biol. 2010 Oct 26; 20(20): 1787–1798. Published online 2010 Oct 7. doi: 10.1016/j.cub.2010.09.006
PMCID:
PMC4763543
AbstractArticlePDF–1.9M
16.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
17.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
18.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
19.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
AbstractArticlePDF–618K
20.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M

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