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Select item 93364951.

Chromatin and transcriptomic profiling uncover dysregulation of the Tip60 HAT/HDAC2 epigenomic landscape in the neurodegenerative brain

Mariah Beaver, Bhanu Chandra Karisetty, Haolin Zhang, Akanksha Bhatnagar, Ellen Armour, Visha Parmar, Reshma Brown, Merry Xiang, Felice Elefant

Epigenetics. 2022; 17(7): 786–807. Published online 2021 Aug 9. doi: 10.1080/15592294.2021.1959742

PMCID:: PMC9336495

Abstract Article PDF–3.5M

Select item 69615782.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 68348843.

Knockdown of arylalkylamine N-acetyltransferase-like 2 in Drosophila melanogaster

Ryan L. Anderson, Dylan J. Wallis, Alexander Aguirre, Dean Holliday, David J. Merkler

Arch Insect Biochem Physiol. Author manuscript; available in PMC 2019 Dec 1.

Published in final edited form as: Arch Insect Biochem Physiol. 2019 Dec; 102(4): e21608. Published online 2019 Aug 6. doi: 10.1002/arch.21608

PMCID:: PMC6834884

Abstract Article PDF–961K

Select item 60706974.

Insect Arylalkylamine N-Acyltransferases: Mechanism and Role in Fatty Acid Amide Biosynthesis

Brian G. O'Flynn, Gabriela Suarez, Aidan J. Hawley, David J. Merkler

Front Mol Biosci. 2018; 5: 66. Published online 2018 Jul 26. doi: 10.3389/fmolb.2018.00066

PMCID:: PMC6070697

Abstract Article PDF–4.0M

Select item 57078055.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890026.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 53622407.

Drosophila TRF2 and TAF9 regulate lipid droplet size and phospholipid fatty acid composition

Wei Fan, Sin Man Lam, Jingxue Xin, Xiao Yang, Zhonghua Liu, Yuan Liu, Yong Wang, Guanghou Shui, Xun Huang

PLoS Genet. 2017 Mar; 13(3): e1006664. Published online 2017 Mar 8. doi: 10.1371/journal.pgen.1006664

PMCID:: PMC5362240

Abstract Article PDF–2.8M

Select item 48000028.

The sexual identity of adult intestinal stem cells controls organ size and plasticity

Bruno Hudry, Sanjay Khadayate, Irene Miguel-Aliaga

Nature. Author manuscript; available in PMC 2016 Aug 18.

Published in final edited form as: Nature. 2016 Feb 18; 530(7590): 344–348. doi: 10.1038/nature16953

PMCID:: PMC4800002

Abstract Article PDF–7.5M

Select item 46631769.

Probing the Chemical Mechanism and Critical Regulatory Amino Acid Residues of Drosophila melanogaster Arylalkylamine N-acyltransferase Like 2

Daniel R. Dempsey, Anne-Marie Carpenter, Santiago Rodriguez Ospina, David J. Merkler

Insect Biochem Mol Biol. Author manuscript; available in PMC 2016 Nov 1.

Published in final edited form as: Insect Biochem Mol Biol. 2015 Nov; 66: 1–12. Published online 2015 Oct 21. doi: 10.1016/j.ibmb.2015.10.003

PMCID:: PMC4663176

Abstract Article PDF–1009K

Select item 452833010.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832911.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 439470412.

Structures and functions of insect arylalkylamine N-acetyltransferase (iaaNAT); a key enzyme for physiological and behavioral switch in arthropods

Susumu Hiragaki, Takeshi Suzuki, Ahmed A. M. Mohamed, Makio Takeda

Front Physiol. 2015; 6: 113. Published online 2015 Apr 13. doi: 10.3389/fphys.2015.00113

PMCID:: PMC4394704

Abstract Article PDF–8.7M

Select item 439155513.

Identification of Genes That Promote or Inhibit Olfactory Memory Formation in Drosophila

Erica Walkinshaw, Yunchao Gai, Caitlin Farkas, Daniel Richter, Eric Nicholas, Krystyna Keleman, Ronald L. Davis

Genetics. 2015 Apr; 199(4): 1173–1182. Published online 2015 Feb 2. doi: 10.1534/genetics.114.173575

PMCID:: PMC4391555

Abstract Article PDF–1.1M

Select item 435288714.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427038615.

Mechanistic and Structural Analysis of Drosophila melanogaster Arylalkylamine N-Acetyltransferases

Daniel R. Dempsey, Kristen A. Jeffries, Jason D. Bond, Anne-Marie Carpenter, Santiago Rodriguez-Ospina, Leonid Breydo, K. Kenneth Caswell, David J. Merkler

Biochemistry. 2014 Dec 16; 53(49): 7777–7793. Published online 2014 Nov 18. doi: 10.1021/bi5006078

PMCID:: PMC4270386

Abstract Article PDF–6.1M

Select item 395215416.

Identification of an arylalkylamine N-acyltransferase from Drosophila melanogaster that catalyzes the formation of long-chain N-acylserotonins

Daniel R. Dempsey, Kristen A. Jeffries, Ryan L. Anderson, Anne-Marie Carpenter, Santiago Rodriguez Ospina, David J. Merkler

FEBS Lett. Author manuscript; available in PMC 2015 Feb 14.

Published in final edited form as: FEBS Lett. 2014 Feb 14; 588(4): 594–599. Published online 2014 Jan 18. doi: 10.1016/j.febslet.2013.12.027

PMCID:: PMC3952154

Abstract Article PDF–263K

Select item 353067717.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946718.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

Select item 304044119.

A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene

G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Nov 12.

Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047

PMCID:: PMC3040441

Abstract Article PDF–2.0M

Select item 282505320.

Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin

Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker

Science. Author manuscript; available in PMC 2010 Feb 19.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816

PMCID:: PMC2825053

Abstract Article PDF–858K

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