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Items: 1 to 20 of 37

1.
Lipidome Unsaturation Affects the Morphology and Proteome of the Drosophila Eye
Mukesh Kumar, Canan Has, Khanh Lam-Kamath, Sophie Ayciriex, Deepshe Dewett, Mhamed Bashir, Clara Poupault, Kai Schuhmann, Henrik Thomas, Oskar Knittelfelder, Bharath Kumar Raghuraman, Robert Ahrends, Jens Rister, Andrej Shevchenko
J Proteome Res. 2024 Apr 5; 23(4): 1188–1199. Published online 2024 Mar 14. doi: 10.1021/acs.jproteome.3c00570
PMCID:
PMC11002927
AbstractArticlePDF–4.8M
2.
DNA damage signaling in Drosophila macrophages modulates systemic cytokine levels in response to oxidative stress
Fabian Hersperger, Tim Meyring, Pia Weber, Chintan Chhatbar, Gianni Monaco, Marc S Dionne, Katrin Paeschke, Marco Prinz, Olaf Groß, Anne-Kathrin Classen, Katrin Kierdorf
eLife. 2024; 12: RP86700. Published online 2024 Jan 8. doi: 10.7554/eLife.86700
PMCID:
PMC10945508
AbstractArticlePDF–5.7M
3.
Single-cell sequencing of tumor-associated macrophages in a Drosophila model
Dilan Khalili, Mubasher Mohammed, Martin Kunc, Martina Sindlerova, Johan Ankarklev, Ulrich Theopold
Front Immunol. 2023; 14: 1243797. Published online 2023 Sep 19. doi: 10.3389/fimmu.2023.1243797
PMCID:
PMC10546068
AbstractArticlePDF–7.2M
4.
dGLYAT modulates Gadd45-mediated JNK activation and cell invasion
Meng Xu, Pu Ren, Juhui Tian, Lisha Xiao, Ping Hu, Ping Chen, Wenzhe Li, Lei Xue
Cell Div. 2022; 17: 4. Published online 2022 Aug 6. doi: 10.1186/s13008-022-00080-5
PMCID:
PMC9357319
AbstractArticlePDF–6.8M
5.
Single-nucleus RNA-sequencing in pre-cellularization Drosophila melanogaster embryos
Ashley R. Albright, Michael R. Stadler, Michael B. Eisen
PLoS One. 2022; 17(6): e0270471. Published online 2022 Jun 24. doi: 10.1371/journal.pone.0270471
PMCID:
PMC9232161
AbstractArticlePDF–1.7M
6.
Regulatory regions in natural transposable element insertions drive interindividual differences in response to immune challenges in Drosophila
Anna Ullastres, Miriam Merenciano, Josefa González
Genome Biol. 2021; 22: 265. Published online 2021 Sep 14. doi: 10.1186/s13059-021-02471-3
PMCID:
PMC8439047
AbstractArticlePDF–2.9M
7.
First transcriptome profiling of D. melanogaster after development in a deep underground low radiation background laboratory
Mikhail Zarubin, Albert Gangapshev, Yuri Gavriljuk, Vladimir Kazalov, Elena Kravchenko
PLoS One. 2021; 16(8): e0255066. Published online 2021 Aug 5. doi: 10.1371/journal.pone.0255066
PMCID:
PMC8341612
AbstractArticlePDF–1.5M
8.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
9.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
10.
A pupal transcriptomic screen identifies Ral as a target of store-operated calcium entry in Drosophila neurons
Shlesha Richhariya, Siddharth Jayakumar, Katharine Abruzzi, Michael Rosbash, Gaiti Hasan
Sci Rep. 2017; 7: 42586. Published online 2017 Feb 14. doi: 10.1038/srep42586
PMCID:
PMC5307359
AbstractArticlePDF–2.1M
11.
Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster
Punita Juneja, Andrew Quinn, Francis M. Jiggins
BMC Genomics. 2016; 17: 981. Published online 2016 Nov 28. doi: 10.1186/s12864-016-3333-7
PMCID:
PMC5126864
AbstractArticlePDF–1.1M
12.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
13.
Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet
Ibrahim Ömer Çiçek, Samir Karaca, Marko Brankatschk, Suzanne Eaton, Henning Urlaub, Halyna R. Shcherbata
Genetics. 2016 Mar; 202(3): 1167–1183. Published online 2016 Jan 22. doi: 10.1534/genetics.115.185371
PMCID:
PMC4788116
AbstractArticlePDF–4.7M
14.
Proteomic Analysis of the Ubiquitin Landscape in the Drosophila Embryonic Nervous System and the Adult Photoreceptor Cells
Juanma Ramirez, Aitor Martinez, Benoit Lectez, So Young Lee, Maribel Franco, Rosa Barrio, Gunnar Dittmar, Ugo Mayor
PLoS One. 2015; 10(10): e0139083. Published online 2015 Oct 13. doi: 10.1371/journal.pone.0139083
PMCID:
PMC4604154
AbstractArticlePDF–3.1M
15.
The Genomic Basis of Postponed Senescence in Drosophila melanogaster
Megan Ulmer Carnes, Terry Campbell, Wen Huang, Daniel G. Butler, Mary Anna Carbone, Laura H. Duncan, Sasha V. Harbajan, Edward M. King, Kara R. Peterson, Alexander Weitzel, Shanshan Zhou, Trudy F. C. Mackay
PLoS One. 2015; 10(9): e0138569. Published online 2015 Sep 17. doi: 10.1371/journal.pone.0138569
PMCID:
PMC4574564
AbstractArticlePDF–1.5M
16.
The bHLH Transcription Factor Hand Regulates the Expression of Genes Critical to Heart and Muscle Function in Drosophila melanogaster
Benjamin Hallier, Julia Hoffmann, Thomas Roeder, Markus Tögel, Heiko Meyer, Achim Paululat
PLoS One. 2015; 10(8): e0134204. Published online 2015 Aug 7. doi: 10.1371/journal.pone.0134204
PMCID:
PMC4529270
AbstractArticlePDF–1.5M
17.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
18.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
19.
LK6/Mnk2a is a new kinase of alpha synuclein phosphorylation mediating neurodegeneration
Shiqing Zhang, Jiang Xie, Ying Xia, Shu Yu, Zhili Gu, Ruili Feng, Guanghong Luo, Dong Wang, Kai Wang, Meng Jiang, Xiao Cheng, Hai Huang, Wu Zhang, Tieqiao Wen
Sci Rep. 2015; 5: 12564. Published online 2015 Jul 29. doi: 10.1038/srep12564
PMCID:
PMC4518213
AbstractArticlePDF–2.1M
20.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K

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