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Select item 111810301.

cAMP/PKA signaling regulates TDP-43 aggregation and mislocalization

Diana M. Ho, Muhammad Shaban, Faisal Mahmood, Payel Ganguly, Leonardo Todeschini, David Van Vactor, Spyros Artavanis-Tsakonas

Proc Natl Acad Sci U S A. 2024 Jun 11; 121(24): e2400732121. Published online 2024 Jun 5. doi: 10.1073/pnas.2400732121

PMCID:: PMC11181030

Abstract Article PDF–3.6M

Select item 102126042.

Developmental regulation of epithelial cell cuboidal-to-squamous transition in Drosophila follicle cells

Dongyu Jia, Allison Jevitt, Yi-Chun Huang, Belen Ramos, Wu-Min Deng

Dev Biol. Author manuscript; available in PMC 2023 May 25.

Published in final edited form as: Dev Biol. 2022 Nov; 491: 113–125. Published online 2022 Sep 12. doi: 10.1016/j.ydbio.2022.09.001

PMCID:: PMC10212604

Abstract Article PDF–2.7M

Select item 101923613.

Indel driven rapid evolution of core nuclear pore protein gene promoters

David W. J. McQuarrie, Adam M. Read, Frannie H. S. Stephens, Alberto Civetta, Matthias Soller

Sci Rep. 2023; 13: 8035. Published online 2023 May 17. doi: 10.1038/s41598-023-34985-0

PMCID:: PMC10192361

Abstract Article PDF–2.2M

Select item 95260664.

The RNA-binding protein Swm is critical for Drosophila melanogaster intestinal progenitor cell maintenance

Ishara S Ariyapala, Kasun Buddika, Heather A Hundley, Brian R Calvi, Nicholas S Sokol

Genetics. 2022 Oct; 222(2): iyac099. Published online 2022 Jun 28. doi: 10.1093/genetics/iyac099

PMCID:: PMC9526066

Abstract Article PDF–1.4M

Select item 94108885.

Functional editing of endogenous genes through rapid selection of cell pools (Rapid generation of endogenously tagged genes in Drosophila ovarian somatic sheath cells)

Qingcai Meng, Daniel Stoyko, Celine Marlin Andrews, Parthena Konstantinidou, Pavol Genzor, Timothy O, Alexandra R Elchert, Leif Benner, Sushil Sobti, Esther Y Katz, Astrid D Haase

Nucleic Acids Res. 2022 Aug 26; 50(15): e90. Published online 2022 May 27. doi: 10.1093/nar/gkac448

PMCID:: PMC9410888

Abstract Article PDF–3.6M

Select item 92265196.

Tissue-specific regulation of translational readthrough tunes functions of the traffic jam transcription factor

Prajwal Karki, Travis D Carney, Cristina Maracci, Andriy S Yatsenko, Halyna R Shcherbata, Marina V Rodnina

Nucleic Acids Res. 2022 Jun 24; 50(11): 6001–6019. Published online 2021 Dec 13. doi: 10.1093/nar/gkab1189

PMCID:: PMC9226519

Abstract Article PDF–4.7M

Select item 87297837.

A single-molecule localization microscopy method for tissues reveals nonrandom nuclear pore distribution in Drosophila

Jinmei Cheng, Edward S. Allgeyer, Jennifer H. Richens, Edo Dzafic, Amandine Palandri, Bohdan Lewków, George Sirinakis, Daniel St Johnston

J Cell Sci. 2021 Dec 15; 134(24): jcs259570. Published online 2021 Dec 16. doi: 10.1242/jcs.259570

PMCID:: PMC8729783

Abstract Article

Select item 73370718.

Amyotrophic Lateral Sclerosis Modifiers in Drosophila Reveal the Phospholipase D Pathway as a Potential Therapeutic Target

Mark W. Kankel, Anindya Sen, Lei Lu, Marina Theodorou, Douglas N. Dimlich, Alexander McCampbell, Christopher E. Henderson, Neil A. Shneider, Spyros Artavanis-Tsakonas

Genetics. 2020 Jul; 215(3): 747–766. Published online 2020 Apr 28. doi: 10.1534/genetics.119.302985

PMCID:: PMC7337071

Abstract Article PDF–2.6M

Select item 57078059.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900210.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 507911111.

C9orf72 dipeptide repeats impair the assembly, dynamics and function of membrane-less organelles

Kyung-Ha Lee, Peipei Zhang, Hong Joo Kim, Diana Mitrea, Mohona Sarkar, Brian Freibaum, Jaclyn Cika, Maura Coughlin, James Messing, Amandine Molliex, Brian Maxwell, Nam Chul Kim, Jamshid Temirov, Jennifer Moore, Regina-Maria Kolaitis, Timothy Shaw, Bing Bai, Junmin Peng, Richard Kriwacki, J. Paul Taylor

Cell. Author manuscript; available in PMC 2017 Oct 20.

Published in final edited form as: Cell. 2016 Oct 20; 167(3): 774–788.e17. doi: 10.1016/j.cell.2016.10.002

PMCID:: PMC5079111

Abstract Article PDF–2.3M

Select item 463139912.

GGGGCC repeat expansion in C9ORF72 compromises nucleocytoplasmic transport

Brian D. Freibaum, Yubing Lu, Rodrigo Lopez-Gonzalez, Nam Chul Kim, Sandra Almeida, Kyung-Ha Lee, Nisha Badders, Marc Valentine, Bruce L. Miller, Philip C. Wong, Leonard Petrucelli, Hong Joo Kim, Fen-Biao Gao, J. Paul Taylor

Nature. Author manuscript; available in PMC 2016 Mar 3.

Published in final edited form as: Nature. 2015 Sep 3; 525(7567): 129–133. Published online 2015 Aug 26. doi: 10.1038/nature14974

PMCID:: PMC4631399

Abstract Article PDF–3.3M

Select item 456802513.

Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions

Albert J. Erives

Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1

PMCID:: PMC4568025

Abstract Article PDF–2.8M

Select item 452833014.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832915.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288716.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114