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Items: 1 to 20 of 25

1.
BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)
Kou Motani, Hidetaka Kosako
J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323
PMCID:
PMC7415991
AbstractArticlePDF–2.0M
2.
Plasticity in the Glucagon Interactome Reveals Novel Proteins That Regulate Glucagon Secretion in α-TC1-6 Cells
Farzad Asadi, Savita Dhanvantari
Front Endocrinol (Lausanne) 2018; 9: 792. Published online 2019 Jan 18. doi: 10.3389/fendo.2018.00792
PMCID:
PMC6346685
AbstractArticlePDF–3.6M
3.
Dynamic changes in H1 subtype composition during epigenetic reprogramming
Annalisa Izzo, Céline Ziegler-Birling, Peter W.S. Hill, Lydia Brondani, Petra Hajkova, Maria-Elena Torres-Padilla, Robert Schneider
J Cell Biol. 2017 Oct 2; 216(10): 3017–3028. doi: 10.1083/jcb.201611012
PMCID:
PMC5626532
AbstractArticlePDF–2.2M
4.
Mechanisms and Consequences of Dopamine Depletion-Induced Attenuation of the Spinophilin/Neurofilament Medium Interaction
Andrew C. Hiday, Michael C. Edler, Asma B. Salek, Cameron W. Morris, Morrent Thang, Tyler J. Rentz, Kristie L. Rose, Lisa M. Jones, Anthony J. Baucum, II
Neural Plast. 2017; 2017: 4153076. Published online 2017 May 28. doi: 10.1155/2017/4153076
PMCID:
PMC5467389
AbstractArticlePDF–3.2M
5.
Role of H1 Linker Histones in Mammalian Development and Stem Cell Differentiation
Chenyi Pan, Yuhong Fan
Biochim Biophys Acta. Author manuscript; available in PMC 2017 Mar 1.
Published in final edited form as: Biochim Biophys Acta. 2016 Mar; 1859(3): 496–509. Published online 2015 Dec 13. doi: 10.1016/j.bbagrm.2015.12.002
PMCID:
PMC4775330
AbstractArticlePDF–1.5M
6.
Genome-wide analysis of the p53 gene regulatory network in the developing mouse kidney
Yuwen Li, Jiao Liu, Nathan McLaughlin, Dimcho Bachvarov, Zubaida Saifudeen, Samir S. El-Dahr
Physiol Genomics. 2013 Oct 15; 45(20): 948–964. Published online 2013 Sep 3. doi: 10.1152/physiolgenomics.00113.2013
PMCID:
PMC3798767
AbstractArticle
7.
High-Resolution Mapping of H1 Linker Histone Variants in Embryonic Stem Cells
Kaixiang Cao, Nathalie Lailler, Yunzhe Zhang, Ashwath Kumar, Karan Uppal, Zheng Liu, Eva K. Lee, Hongwei Wu, Magdalena Medrzycki, Chenyi Pan, Po-Yi Ho, Guy P. Cooper, Jr, Xiao Dong, Christoph Bock, Eric E. Bouhassira, Yuhong Fan
PLoS Genet. 2013 Apr; 9(4): e1003417. Published online 2013 Apr 25. doi: 10.1371/journal.pgen.1003417
PMCID:
PMC3636266
AbstractArticlePDF–3.9M
8.
BTB-ZF factors recruit the E3 ligase cullin 3 to regulate lymphoid effector programs
Rebecca Mathew, Michael P. Seiler, Seth T. Scanlon, Aiping Mao, Michael G. Constantinides, Clara Bertozzi-Villa, Jeffrey D. Singer, Albert Bendelac
Nature. Author manuscript; available in PMC 2013 May 22.
Published in final edited form as: Nature. 2012 Nov 22; 491(7425): 618–621. Published online 2012 Oct 21. doi: 10.1038/nature11548
PMCID:
PMC3504649
AbstractArticlePDF–1.3M
9.
Network Organization of the Huntingtin Proteomic Interactome in Mammalian Brain
Dyna I. Shirasaki, Erin R. Greiner, Ismael Al-Ramahi, Michelle Gray, Pinmanee Boontheung, Daniel H. Geschwind, Juan Botas, Giovanni Coppola, Steve Horvath, Joseph A. Loo, X. William Yang
Neuron. Author manuscript; available in PMC 2013 Jul 12.
Published in final edited form as: Neuron. 2012 Jul 12; 75(1): 41–57. doi: 10.1016/j.neuron.2012.05.024
PMCID:
PMC3432264
AbstractArticlePDF–4.9M
10.
Reduction of Hox Gene Expression by Histone H1 Depletion
Yunzhe Zhang, Zheng Liu, Magdalena Medrzycki, Kaixiang Cao, Yuhong Fan
PLoS One. 2012; 7(6): e38829. Published online 2012 Jun 11. doi: 10.1371/journal.pone.0038829
PMCID:
PMC3372500
AbstractArticlePDF–2.2M
11.
Histone H1 Depletion Impairs Embryonic Stem Cell Differentiation
Yunzhe Zhang, Marissa Cooke, Shiraj Panjwani, Kaixiang Cao, Beth Krauth, Po-Yi Ho, Magdalena Medrzycki, Dawit T. Berhe, Chenyi Pan, Todd C. McDevitt, Yuhong Fan
PLoS Genet. 2012 May; 8(5): e1002691. Published online 2012 May 10. doi: 10.1371/journal.pgen.1002691
PMCID:
PMC3349736
AbstractArticlePDF–3.2M
12.
Histone H1 Recruitment by CHD8 Is Essential for Suppression of the Wnt–β-Catenin Signaling Pathway
Masaaki Nishiyama, Arthur I. Skoultchi, Keiichi I. Nakayama
Mol Cell Biol. 2012 Jan; 32(2): 501–512. doi: 10.1128/MCB.06409-11
PMCID:
PMC3255766
AbstractArticlePDF–1.6M
13.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
14.
The Rhox Homeobox Gene Cluster Is Imprinted and Selectively Targeted for Regulation by Histone H1 and DNA Methylation
James A. MacLean, Anilkumar Bettegowda, Byung Ju Kim, Chih-Hong Lou, Seung-Min Yang, Anjana Bhardwaj, Sreenath Shanker, Zhiying Hu, Yuhong Fan, Sigrid Eckardt, K. John McLaughlin, Arthur I. Skoultchi, Miles F. Wilkinson
Mol Cell Biol. 2011 Mar; 31(6): 1275–1287. Published online 2011 Jan 18. doi: 10.1128/MCB.00734-10
PMCID:
PMC3067900
AbstractArticlePDF–1.7M
15.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
16.
Chromatin Condensing Functions of the Linker Histone C-terminal Domain are mediated by Specific Amino Acid Composition and Intrinsic Protein Disorder
Xu Lu, Barbara Hamkalo, Missag H. Parseghian, Jeffrey C. Hansen
Biochemistry. Author manuscript; available in PMC 2010 Jan 13.
Published in final edited form as: Biochemistry. 2009 Jan 13; 48(1): 164–172. doi: 10.1021/bi801636y
PMCID:
PMC2644900
AbstractArticlePDF–1.7M
17.
Identification of transcripts with enriched expression in the developing and adult pancreas
Brad G Hoffman, Bogard Zavaglia, Joy Witzsche, Teresa Ruiz de Algara, Mike Beach, Pamela A Hoodless, Steven JM Jones, Marco A Marra, Cheryl D Helgason
Genome Biol. 2008; 9(6): R99. Published online 2008 Jun 14. doi: 10.1186/gb-2008-9-6-r99
PMCID:
PMC2481431
AbstractArticlePDF–2.2M
18.
Nε-Formylation of lysine is a widespread post-translational modification of nuclear proteins occurring at residues involved in regulation of chromatin function
Jacek R. Wiśniewski, Alexandre Zougman, Matthias Mann
Nucleic Acids Res. 2008 Feb; 36(2): 570–577. Published online 2007 Dec 1. doi: 10.1093/nar/gkm1057
PMCID:
PMC2241850
AbstractArticlePDF–1.8M
19.
The preferential binding of histone H1 to DNA scaffold-associated regions is determined by its C-terminal domain
Alicia Roque, Mary Orrego, Imma Ponte, Pedro Suau
Nucleic Acids Res. 2004; 32(20): 6111–6119. Published online 2004 Nov 23. doi: 10.1093/nar/gkh945
PMCID:
PMC534626
AbstractArticlePDF–305K
20.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M

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