PMC Links for GEO Profiles (Select 564005) - PMC

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Items: 15

Select item 72612041.

Antitoxin DinJ influences the general stress response through transcript stabilizer CspE

Ying Hu, Michael J. Benedik, Thomas K. Wood

Environ Microbiol. Author manuscript; available in PMC 2020 May 30.

Published in final edited form as: Environ Microbiol. 2012 Mar; 14(3): 669–679. Published online 2011 Oct 26. doi: 10.1111/j.1462-2920.2011.02618.x

PMCID:: PMC7261204

Abstract Article PDF–975K

Select item 41238552.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 41102693.

Mechanisms of Toxin Inhibition and Transcriptional Repression by Escherichia coli DinJ-YafQ

Ajchareeya Ruangprasert, Tatsuya Maehigashi, Stacey J. Miles, Nisha Giridharan, Julie X. Liu, Christine M. Dunham

J Biol Chem. 2014 Jul 25; 289(30): 20559–20569. Published online 2014 Jun 4. doi: 10.1074/jbc.M114.573006

PMCID:: PMC4110269

Abstract Article PDF–2.2M

Select item 32948234.

Characterization of Escherichia colidinJ-yafQ Toxin-Antitoxin System Using Insights from Mutagenesis Data

Julija Armalytė, Milda Jurėnaitė, Gina Beinoravičiūtė, Justinas Teišerskas, Edita Sužiedėlienė

J Bacteriol. 2012 Mar; 194(6): 1523–1532. doi: 10.1128/JB.06104-11

PMCID:: PMC3294823

Abstract Article PDF–2.1M

Select item 27279475.

A Differential Effect of E. coli Toxin-Antitoxin Systems on Cell Death in Liquid Media and Biofilm Formation

Ilana Kolodkin-Gal, Reut Verdiger, Ayalla Shlosberg-Fedida, Hanna Engelberg-Kulka

PLoS One. 2009; 4(8): e6785. Published online 2009 Aug 26. doi: 10.1371/journal.pone.0006785

Correction in:: PLoS One. 2015; 10(10): e0140184.

PMCID:: PMC2727947

Abstract Article PDF–575K

Select item 26320036.

Toxin-Antitoxin Systems in Escherichia coli Influence Biofilm Formation through YjgK (TabA) and Fimbriae

Younghoon Kim, Xiaoxue Wang, Qun Ma, Xue-Song Zhang, Thomas K. Wood

J Bacteriol. 2009 Feb; 191(4): 1258–1267. Published online 2008 Dec 5. doi: 10.1128/JB.01465-08

PMCID:: PMC2632003

Abstract Article PDF–809K

Select item 19518997.

What Is the Benefit to Escherichia coli of Having Multiple Toxin-Antitoxin Systems in Its Genome?

Virginie Tsilibaris, Geneviève Maenhaut-Michel, Natacha Mine, Laurence Van Melderen

J Bacteriol. 2007 Sep; 189(17): 6101–6108. Published online 2007 May 18. doi: 10.1128/JB.00527-07

PMCID:: PMC1951899

Abstract Article PDF–342K

Select item 19518968.

Hypothetical Functions of Toxin-Antitoxin Systems

Roy David Magnuson

J Bacteriol. 2007 Sep; 189(17): 6089–6092. Published online 2007 Jul 6. doi: 10.1128/JB.00958-07

PMCID:: PMC1951896

Article PDF–219K

Select item 16814819.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 155740210.

Persisters: a distinct physiological state of E. coli

Devang Shah, Zhigang Zhang, Arkady Khodursky, Niilo Kaldalu, Kristi Kurg, Kim Lewis

BMC Microbiol. 2006; 6: 53. Published online 2006 Jun 12. doi: 10.1186/1471-2180-6-53

PMCID:: PMC1557402

Abstract Article PDF–612K

Select item 146163811.

Comparative gene expression profiles following UV exposure in wild-type and SOS-deficient Escherichia coli.

J Courcelle, A Khodursky, B Peter, P O Brown, P C Hanawalt

Genetics. 2001 May; 158(1): 41–64. doi: 10.1093/genetics/158.1.41

PMCID:: PMC1461638

Summary PDF–1.2M

Select item 144809912.

Stress and Survival of Aging Escherichia coli rpoS Colonies

Claude Saint-Ruf, François Taddei, Ivan Matic

Genetics. 2004 Sep; 168(1): 541–546. doi: 10.1534/genetics.104.028704

PMCID:: PMC1448099

Abstract Article PDF–137K

Select item 132520013.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405