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Select item 41238551.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 28914002.

The Quinone-Binding and Catalytic Site of Complex II

Elena Maklashina, Gary Cecchini

Biochim Biophys Acta. Author manuscript; available in PMC 2011 Dec 1.

Published in final edited form as: Biochim Biophys Acta. 2010 Dec; 1797(12): 1877–1882. Published online 2010 Feb 20. doi: 10.1016/j.bbabio.2010.02.015

PMCID:: PMC2891400

Abstract Article PDF–252K

Select item 27856143.

Structure of Escherichia coli Succinate:Quinone Oxidoreductase with an Occupied and Empty Quinone-binding Site

Jonathan Ruprecht, Victoria Yankovskaya, Elena Maklashina, So Iwata, Gary Cecchini

J Biol Chem. 2009 Oct 23; 284(43): 29836–29846. Published online 2009 Aug 25. doi: 10.1074/jbc.M109.010058

PMCID:: PMC2785614

Abstract Article PDF–4.1M

Select item 25312814.

Screening of detergents for solubilization, purification and crystallization of membrane proteins: a case study on succinate:ubiquinone oxidoreductase from Escherichia coli

Hironari Shimizu, Coh-ichi Nihei, Daniel Ken Inaoka, Tatushi Mogi, Kiyoshi Kita, Shigeharu Harada

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Sep 1; 64(Pt 9): 858–862. Published online 2008 Aug 29. doi: 10.1107/S1744309108026596

PMCID:: PMC2531281

Abstract Article PDF–259K

Select item 23974895.

A Threonine on the Active Site Loop Controls Transition State Formation in Escherichia coli Respiratory Complex II

Thomas M. Tomasiak, Elena Maklashina, Gary Cecchini, Tina M. Iverson

J Biol Chem. 2008 May 30; 283(22): 15460–15468. doi: 10.1074/jbc.M801372200

PMCID:: PMC2397489

Abstract Article PDF–467K

Select item 21438086.

Covalent attachment of flavin adenine dinucleotide (FAD) and flavin mononucleotide (FMN) to enzymes: the current state of affairs.

M. Mewies, W. S. McIntire, N. S. Scrutton

Protein Sci. 1998 Jan; 7(1): 7–20. doi: 10.1002/pro.5560070102

PMCID:: PMC2143808

Summary PDF–3.3M

Select item 20842877.

Escherichia coli succinate dehydrogenase variant lacking the heme b

Quang M. Tran, Richard A. Rothery, Elena Maklashina, Gary Cecchini, Joel H. Weiner

Proc Natl Acad Sci U S A. 2007 Nov 13; 104(46): 18007–18012. Published online 2007 Nov 7. doi: 10.1073/pnas.0707732104

PMCID:: PMC2084287

Abstract Article PDF–582K

Select item 17973098.

Genome-Wide Screening of Genes Required for Swarming Motility in Escherichia coli K-12

Tetsuyoshi Inoue, Ryuji Shingaki, Shotaro Hirose, Kaori Waki, Hirotada Mori, Kazuhiro Fukui

J Bacteriol. 2007 Feb; 189(3): 950–957. Published online 2006 Nov 22. doi: 10.1128/JB.01294-06

PMCID:: PMC1797309

Abstract Article PDF–141K

Select item 16814819.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 145705210.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 132520011.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405