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Select item 52147411.

Cryo-EM structures of the autoinhibited E. coli ATP synthase in three rotational states

Meghna Sobti, Callum Smits, Andrew SW Wong, Robert Ishmukhametov, Daniela Stock, Sara Sandin, Alastair G Stewart

eLife. 2016; 5: e21598. Published online 2016 Dec 21. doi: 10.7554/eLife.21598

PMCID:: PMC5214741

Abstract Article PDF–3.6M

Select item 41238552.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 40142873.

A Second-generation Protein–Protein Interaction Network of Helicobacter pylori

Roman Häuser, Arnaud Ceol, Seesandra V. Rajagopala, Roberto Mosca, Gabriella Siszler, Nadja Wermke, Patricia Sikorski, Frank Schwarz, Matthias Schick, Stefan Wuchty, Patrick Aloy, Peter Uetz

Mol Cell Proteomics. 2014 May; 13(5): 1318–1329. Published online 2014 Mar 13. doi: 10.1074/mcp.O113.033571

PMCID:: PMC4014287

Abstract Article PDF–2.2M

Select item 39561974.

Anatomy of F₁-ATPase powered rotation

James L. Martin, Robert Ishmukhametov, Tassilo Hornung, Zulfiqar Ahmad, Wayne D. Frasch

Proc Natl Acad Sci U S A. 2014 Mar 11; 111(10): 3715–3720. Published online 2014 Feb 24. doi: 10.1073/pnas.1317784111

PMCID:: PMC3956197

Abstract Article PDF–1.3M

Select item 30793185.

Function of the Usher N terminus in Catalyzing Pilus Assembly

Nadine S. Henderson, Tony W. Ng, Iehab Talukder, David G. Thanassi

Mol Microbiol. Author manuscript; available in PMC 2012 Feb 1.

Published in final edited form as: Mol Microbiol. 2011 Feb; 79(4): 954–967. Published online 2010 Dec 22. doi: 10.1111/j.1365-2958.2010.07505.x

PMCID:: PMC3079318

Abstract Article PDF–825K

Select item 30361736.

Fiber Formation across the Bacterial Outer Membrane by the Chaperone/Usher Pathway

Han Remaut, Chunyan Tang, Nadine S. Henderson, Jerome S. Pinkner, Tao Wang, Scott J. Hultgren, David G. Thanassi, Gabriel Waksman, Huilin Li

Cell. Author manuscript; available in PMC 2011 Feb 9.

Published in final edited form as: Cell. 2008 May 16; 133(4): 640–652. doi: 10.1016/j.cell.2008.03.033

PMCID:: PMC3036173

Abstract Article PDF–5.2M

Select item 30099317.

Single Molecule Behavior of Inhibited and Active States of Escherichia coli ATP Synthase F₁ Rotation

Mizuki Sekiya, Hiroyuki Hosokawa, Mayumi Nakanishi-Matsui, Marwan K. Al-Shawi, Robert K. Nakamoto, Masamitsu Futai

J Biol Chem. 2010 Dec 31; 285(53): 42058–42067. Published online 2010 Oct 25. doi: 10.1074/jbc.M110.176701

PMCID:: PMC3009931

Abstract Article PDF–1.9M

Select item 29110208.

The Differential Affinity of the Usher for Chaperone-Subunit Complexes is Required for Assembly of Complete Pili

Qinyuan Li, Tony W. Ng, Karen W. Dodson, Stephane Shu Kin So, Ken-Michael Bayle, Jerome S. Pinkner, Suzanne Scarlata, Scott J. Hultgren, David G. Thanassi

Mol Microbiol. Author manuscript; available in PMC 2011 Apr 1.

Published in final edited form as: Mol Microbiol. 2010 Apr; 76(1): 159–172. Published online 2010 Feb 24. doi: 10.1111/j.1365-2958.2010.07089.x

PMCID:: PMC2911020

Abstract Article PDF–1.6M

Select item 28380329.

Structural Homology between the C-Terminal Domain of the PapC Usher and Its Plug

Bradley Ford, Ana Toste Rêgo, Timothy J. Ragan, Jerome Pinkner, Karen Dodson, Paul C. Driscoll, Scott Hultgren, Gabriel Waksman

J Bacteriol. 2010 Apr; 192(7): 1824–1831. Published online 2010 Jan 29. doi: 10.1128/JB.01677-09

PMCID:: PMC2838032

Abstract Article PDF–1.3M

Select item 275596210.

Temperature Dependence of Single Molecule Rotation of the Escherichia coli ATP Synthase F₁ Sector Reveals the Importance of γ-β Subunit Interactions in the Catalytic Dwell

Mizuki Sekiya, Robert K. Nakamoto, Marwan K. Al-Shawi, Mayumi Nakanishi-Matsui, Masamitsu Futai

J Biol Chem. 2009 Aug 14; 284(33): 22401–22410. Published online 2009 Jun 5. doi: 10.1074/jbc.M109.009019

PMCID:: PMC2755962

Abstract Article PDF–1.8M

Select item 261502511.

Reduced diversity and increased virulence-gene carriage in intestinal enterobacteria of coeliac children

Ester Sánchez, Inmaculada Nadal, Ester Donat, Carmen Ribes-Koninckx, Miguel Calabuig, Yolanda Sanz

BMC Gastroenterol. 2008; 8: 50. Published online 2008 Nov 4. doi: 10.1186/1471-230X-8-50

PMCID:: PMC2615025

Abstract Article PDF–236K

Select item 258470012.

Domain compliance and elastic power transmission in rotary F_OF₁-ATPase

Hendrik Sielaff, Henning Rennekamp, André Wächter, Hao Xie, Florian Hilbers, Katrin Feldbauer, Stanley D. Dunn, Siegfried Engelbrecht, Wolfgang Junge

Proc Natl Acad Sci U S A. 2008 Nov 18; 105(46): 17760–17765. Published online 2008 Nov 10. doi: 10.1073/pnas.0807683105

PMCID:: PMC2584700

Abstract Article PDF–802K

Select item 257576813.

Determination of torque generation from the power stroke of Escherichia coli F₁-ATPase

Tassilo Hornung, Robert Ishmukhametov, David Spetzler, James Martin, Wayne D. Frasch

Biochim Biophys Acta. Author manuscript; available in PMC 2009 Jul 1.

Published in final edited form as: Biochim Biophys Acta. 2008; 1777(7-8): 579–582. Published online 2008 Apr 18. doi: 10.1016/j.bbabio.2008.04.016

PMCID:: PMC2575768

Abstract Article PDF–435K

Select item 253377014.

A Rotor-Stator Cross-link in the F₁-ATPase Blocks the Rate-limiting Step of Rotational Catalysis

Joanne A. Baylis Scanlon, Marwan K. Al-Shawi, Robert K. Nakamoto

J Biol Chem. 2008 Sep 19; 283(38): 26228–26240. doi: 10.1074/jbc.M804858200

PMCID:: PMC2533770

Abstract Article PDF–612K

Select item 191443815.

A Programmable Optical Angle Clamp for Rotary Molecular Motors

Teuta Pilizota, Thomas Bilyard, Fan Bai, Masamitsu Futai, Hiroyuki Hosokawa, Richard M. Berry

Biophys J. 2007 Jul 1; 93(1): 264–275. Published online 2007 Apr 13. doi: 10.1529/biophysj.106.091074

PMCID:: PMC1914438

Abstract Article PDF–737K

Select item 179730916.

Genome-Wide Screening of Genes Required for Swarming Motility in Escherichia coli K-12

Tetsuyoshi Inoue, Ryuji Shingaki, Shotaro Hirose, Kaori Waki, Hirotada Mori, Kazuhiro Fukui

J Bacteriol. 2007 Feb; 189(3): 950–957. Published online 2006 Nov 22. doi: 10.1128/JB.01294-06

PMCID:: PMC1797309

Abstract Article PDF–141K

Select item 169820917.

Experimental and Computational Assessment of Conditionally Essential Genes in Escherichia coli

Andrew R. Joyce, Jennifer L. Reed, Aprilfawn White, Robert Edwards, Andrei Osterman, Tomoya Baba, Hirotada Mori, Scott A. Lesely, Bernhard Ø. Palsson, Sanjay Agarwalla

J Bacteriol. 2006 Dec; 188(23): 8259–8271. Published online 2006 Sep 29. doi: 10.1128/JB.00740-06

PMCID:: PMC1698209

Abstract Article PDF–779K

Select item 168148118.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 153896519.

A functionally inactive, cold-stabilized form of the Escherichia coli F₁F_o ATP synthase

Mikhail A. Galkin, Robert R. Ishmukhametov, Steven B. Vik

Biochim Biophys Acta. Author manuscript; available in PMC 2007 Mar 1.

Published in final edited form as: Biochim Biophys Acta. 2006 Mar; 1757(3): 206–214. Published online 2006 Mar 20. doi: 10.1016/j.bbabio.2006.02.011

PMCID:: PMC1538965

Abstract Article PDF–701K

Select item 145705220.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806