PMC Links for GEO Profiles (Select 56479868) - PMC

Evy Lobbestael, Jing Zhao, Iakov N. Rudenko, Aleksandra Beylina, Fangye Gao, Justin Wetter, Monique Beullens, Mathieu Bollen, Mark R. Cookson, Veerle Baekelandt, R. Jeremy Nichols, Jean-Marc Taymans

Biochem J. Author manuscript; available in PMC 2016 Dec 7.

Published in final edited form as: Biochem J. 2013 Nov 15; 456(1): 119–128. doi: 10.1042/BJ20121772

PMCID:: PMC5141581

Abstract Article PDF–949K

Select item 31711874.

Kinetic Isotope Effects for Alkaline Phosphatase Reactions: Implications for the Role of Active Site Metal Ions in Catalysis

Jesse G. Zalatan, Irina Catrina, Rebecca Mitchell, Piotr K. Grzyska, Patrick J. O’Brien, Daniel Herschlag, Alvan C. Hengge

J Am Chem Soc. Author manuscript; available in PMC 2011 Sep 12.

Published in final edited form as: J Am Chem Soc. 2007 Aug 8; 129(31): 9789–9798. Published online 2007 Jul 14. doi: 10.1021/ja072196+

PMCID:: PMC3171187

Abstract Article PDF–1.4M

Select item 28235825.

Signal peptides are allosteric activators of the protein translocase

Giorgos Gouridis, Spyridoula Karamanou, Ioannis Gelis, Charalampos G. Kalodimos, Anastassios Economou

Nature. Author manuscript; available in PMC 2010 May 19.

Published in final edited form as: Nature. 2009 Nov 19; 462(7271): 363–367. doi: 10.1038/nature08559

PMCID:: PMC2823582

Abstract Article PDF–613K

Select item 28178416.

Coordination sphere of the third metal site is essential to the activity and metal selectivity of alkaline phosphatases

Dimitris Koutsioulis, Andrzej Lyskowski, Seija Mäki, Ellen Guthrie, Georges Feller, Vassilis Bouriotis, Pirkko Heikinheimo

Protein Sci. 2010 Jan; 19(1): 75–84. Published online 2009 Nov 13. doi: 10.1002/pro.284

PMCID:: PMC2817841

Abstract Article PDF–286K

Select item 27507807.

Detecting Folding Intermediates of a Protein as It Passes Through the Bacterial Translocation Channel

Hiroshi Kadokura, Jon Beckwith

Cell. Author manuscript; available in PMC 2010 Sep 18.

Published in final edited form as: Cell. 2009 Sep 18; 138(6): 1164–1173. doi: 10.1016/j.cell.2009.07.030

PMCID:: PMC2750780

Abstract Article PDF–780K

Select item 26227318.

Comparative Enzymology in the Alkaline Phosphatase Superfamily to Determine the Catalytic Role of an Active Site Metal Ion

Jesse G. Zalatan, Timothy D. Fenn, Daniel Herschlag

J Mol Biol. Author manuscript; available in PMC 2009 Dec 31.

Published in final edited form as: J Mol Biol. 2008 Dec 31; 384(5): 1174–1189. Published online 2008 Oct 2. doi: 10.1016/j.jmb.2008.09.059

PMCID:: PMC2622731

Abstract Article PDF–2.3M

Select item 25871009.

Arginine Coordination in Enzymatic Phosphoryl Transfer: Evaluation of the Effect of Arg166 Mutations in Escherichia coli Alkaline Phosphatase

Patrick J. O'Brien, Jonathan Kyle Lassila, Timothy D. Fenn, Jesse G. Zalatan, Daniel Herschlag

Biochemistry. Author manuscript; available in PMC 2009 Jul 22.

Published in final edited form as: Biochemistry. 2008 Jul 22; 47(29): 7663–7672. doi: 10.1021/bi800545n

PMCID:: PMC2587100

Abstract Article PDF–1.1M

Select item 253895510.

Alkaline Phosphatase Mono- and Di-esterase Reactions: Comparative Transition State Analysis

Jesse G. Zalatan, Daniel Herschlag

J Am Chem Soc. Author manuscript; available in PMC 2008 Sep 17.

Published in final edited form as: J Am Chem Soc. 2006 Feb 1; 128(4): 1293–1303. doi: 10.1021/ja056528r

PMCID:: PMC2538955

Abstract Article PDF–921K

Select item 253249211.

Probing the Origin of the Compromised Catalysis of E. coli Alkaline Phosphatase in its Promiscuous Sulfatase Reaction

Irina Catrina, Patrick J. O'Brien, Jamie Purcell, Ivana Nikolic-Hughes, Jesse G. Zalatan, Alvan C. Hengge, Daniel Herschlag

J Am Chem Soc. Author manuscript; available in PMC 2008 Sep 8.

Published in final edited form as: J Am Chem Soc. 2007 May 2; 129(17): 5760–5765. Published online 2007 Apr 6. doi: 10.1021/ja069111+

PMCID:: PMC2532492

Abstract Article PDF–508K

Select item 224238112.

Trapping the tetrahedral intermediate in the alkaline phosphatase reaction by substitution of the active site serine with threonine

Jie Wang, Evan R. Kantrowitz

Protein Sci. 2006 Oct; 15(10): 2395–2401. doi: 10.1110/ps.062351506

PMCID:: PMC2242381

Abstract Article PDF–298K

Select item 220665013.

A bacterial two-hybrid system based on the twin-arginine transporter pathway of E. coli

Eva-Maria Strauch, George Georgiou

Protein Sci. 2007 May; 16(5): 1001–1008. doi: 10.1110/ps.062687207

PMCID:: PMC2206650

Abstract Article PDF–452K

Select item 217088214.

Structural basis for signal sequence recognition by the 204-kDa translocase motor SecA determined by NMR

Ioannis Gelis, Alexandre M.J.J. Bonvin, Dimitra Keramisanou, Marina Koukaki, Giorgos Gouridis, Spyridoula Karamanou, Anastassios Economou, Charalampos G. Kalodimos

Cell. Author manuscript; available in PMC 2008 Nov 16.

Published in final edited form as: Cell. 2007 Nov 16; 131(4): 756–769. doi: 10.1016/j.cell.2007.09.039

PMCID:: PMC2170882

Abstract Article PDF–6.1M

Select item 214463315.

Alternate modes of binding in two crystal structures of alkaline phosphatase-inhibitor complexes.

K. M. Holtz, B. Stec, J. K. Myers, S. M. Antonelli, T. S. Widlanski, E. R. Kantrowitz

Protein Sci. 2000 May; 9(5): 907–915. doi: 10.1110/ps.9.5.907

PMCID:: PMC2144633

Summary PDF–1.1M

Select item 214317616.

Escherichia coli alkaline phosphatase: X-ray structural studies of a mutant enzyme (His-412-->Asn) at one of the catalytically important zinc binding sites.

L. Ma, T. T. Tibbitts, E. R. Kantrowitz

Protein Sci. 1995 Aug; 4(8): 1498–1506. doi: 10.1002/pro.5560040807

PMCID:: PMC2143176

Summary PDF–1.6M

Select item 168148117.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 145705218.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 132520019.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405