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Items: 1 to 20 of 31

1.
DSBSO-Based XL-MS Analysis of Breast Cancer PDX Tissues to Delineate Protein Interaction Network in Clinical Samples
Fenglong Jiao, Clinton Yu, Andrew Wheat, Lijun Chen, Tung-Shing Mamie Lih, Hui Zhang, Lan Huang
J Proteome Res. Author manuscript; available in PMC 2024 Aug 3.
Published in final edited form as: J Proteome Res. 2024 Aug 2; 23(8): 3269–3279. Published online 2024 Feb 9. doi: 10.1021/acs.jproteome.3c00832
PMCID:
PMC11296914
AbstractArticlePDF–1.7M
2.
circNEIL3 inhibits tumor metastasis through recruiting the E3 ubiquitin ligase Nedd4L to degrade YBX1
Shuang Chen, Ke Li, Jiawei Guo, Hai-Ning Chen, Yue Ming, Yang Jin, Fuyan Xu, Tingting Zhang, Yang Yang, Zixia Ye, Wenrong Liu, Hulin Ma, Jian Cheng, Jian-Kang Zhou, Zhang Li, Shu Shen, Lunzhi Dai, Zong-Guang Zhou, Heng Xu, Yong Peng
Proc Natl Acad Sci U S A. 2023 Mar 28; 120(13): e2215132120. Published online 2023 Mar 24. doi: 10.1073/pnas.2215132120
PMCID:
PMC10068820
AbstractArticlePDF–3.9M
3.
ZNF212 promotes genomic integrity through direct interaction with TRAIP
Hee Jin Chung, Joo Rak Lee, Tae Moon Kim, Soomi Kim, Kibeom Park, Myung-Jin Kim, Eunyoung Jung, Subin Kim, Eun A Lee, Jae Sun Ra, Sunyoung Hwang, Ja Yil Lee, Orlando D Schärer, Yonghwan Kim, Kyungjae Myung, Hongtae Kim
Nucleic Acids Res. 2023 Jan 25; 51(2): 631–649. Published online 2023 Jan 3. doi: 10.1093/nar/gkac1226
PMCID:
PMC9881131
AbstractArticlePDF–4.1M
4.
SARS-CoV-2 N Protein Antagonizes Stress Granule Assembly and IFN Production by Interacting with G3BPs to Facilitate Viral Replication
Hainan Liu, Yu Bai, Xun Zhang, Ting Gao, Yue Liu, Entao Li, Xuefeng Wang, Zheng Cao, Lin Zhu, Qincai Dong, Yong Hu, Guangfei Wang, Caiwei Song, Xiayang Niu, Tong Zheng, Di Wang, Zijing Liu, Yanwen Jin, Ping Li, Xiuwu Bian, Cheng Cao, Xuan Liu
J Virol. 2022 Jun; 96(12): e00412-22. Published online 2022 Jun 2. doi: 10.1128/jvi.00412-22
PMCID:
PMC9215227
AbstractArticlePDF–4.2M
5.
OpenCell: proteome-scale endogenous tagging enables the cartography of human cellular organization
Nathan H. Cho, Keith C. Cheveralls, Andreas-David Brunner, Kibeom Kim, André C. Michaelis, Preethi Raghavan, Hirofumi Kobayashi, Laura Savy, Jason Y. Li, Hera Canaj, James Y.S. Kim, Edna M. Stewart, Christian Gnann, Frank McCarthy, Joana P. Cabrera, Rachel M. Brunetti, Bryant B. Chhun, Greg Dingle, Marco Y. Hein, Bo Huang, Shalin B. Mehta, Jonathan S. Weissman, Rafael Gómez-Sjöberg, Daniel N. Itzhak, Loic A. Royer, Matthias Mann, Manuel D. Leonetti
Science. Author manuscript; available in PMC 2022 Sep 11.
Published in final edited form as: Science. 2022 Mar 11; 375(6585): eabi6983. Published online 2022 Mar 11. doi: 10.1126/science.abi6983
PMCID:
PMC9119736
AbstractArticlePDF–3.3M
6.
EWSR1-induced circNEIL3 promotes glioma progression and exosome-mediated macrophage immunosuppressive polarization via stabilizing IGF2BP3
Ziwen Pan, Rongrong Zhao, Boyan Li, Yanhua Qi, Wei Qiu, Qindong Guo, Shouji Zhang, Shulin Zhao, Hao Xu, Ming Li, Zijie Gao, Yang Fan, Jianye Xu, Huizhi Wang, Shaobo Wang, Jiawei Qiu, Qingtong Wang, Xing Guo, Lin Deng, Ping Zhang, Hao Xue, Gang Li
Mol Cancer. 2022; 21: 16. Published online 2022 Jan 14. doi: 10.1186/s12943-021-01485-6
PMCID:
PMC8759291
AbstractArticlePDF–16M
7.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
8.
Deficiency of NEIL3 Enhances the Chemotherapy Resistance of Prostate Cancer
Yiwei Wang, Liuyue Xu, Shanshan Shi, Sha Wu, Ruijie Meng, Huifang Chen, Zhenyou Jiang
Int J Mol Sci. 2021 Apr; 22(8): 4098. Published online 2021 Apr 15. doi: 10.3390/ijms22084098
PMCID:
PMC8071437
AbstractArticlePDF–6.5M
9.
CircNEIL3 regulatory loop promotes pancreatic ductal adenocarcinoma progression via miRNA sponging and A-to-I RNA-editing
Peng Shen, Taoyue Yang, Qun Chen, Hao Yuan, Pengfei Wu, Baobao Cai, Lingdong Meng, Xumin Huang, Jiaye Liu, Yihan Zhang, Weikang Hu, Yi Miao, Zipeng Lu, Kuirong Jiang
Mol Cancer. 2021; 20: 51. Published online 2021 Mar 9. doi: 10.1186/s12943-021-01333-7
Correction in:
Mol Cancer. 2022; 21: 165.
PMCID:
PMC7941935
AbstractArticlePDF–13M
10.
An autoinhibitory role for the GRF zinc finger domain of DNA glycosylase NEIL3
Alyssa A. Rodriguez, Jessica L. Wojtaszek, Briana H. Greer, Tuhin Haldar, Kent S. Gates, R. Scott Williams, Brandt F. Eichman
J Biol Chem. 2020 Nov 13; 295(46): 15566–15575. Published online 2020 Sep 2. doi: 10.1074/jbc.RA120.015541
PMCID:
PMC7667957
AbstractArticlePDF–2.2M
11.
Cooperation of the NEIL3 and Fanconi anemia/BRCA pathways in interstrand crosslink repair
Niu Li, Jian Wang, Susan S Wallace, Jing Chen, Jia Zhou, Alan D D’Andrea
Nucleic Acids Res. 2020 Apr 6; 48(6): 3014–3028. Published online 2020 Jan 25. doi: 10.1093/nar/gkaa038
PMCID:
PMC7102959
AbstractArticlePDF–3.1M
12.
Processing of N5-substituted formamidopyrimidine DNA adducts by DNA glycosylases NEIL1 and NEIL3
Irina G. Minko, Plamen P. Christov, Liang Li, Michael P. Stone, Amanda K. McCullough, R. Stephen Lloyd
DNA Repair (Amst) Author manuscript; available in PMC 2019 Jun 21.
Published in final edited form as: DNA Repair (Amst). 2019 Jan; 73: 49–54. Published online 2018 Nov 5. doi: 10.1016/j.dnarep.2018.11.001
PMCID:
PMC6588396
AbstractArticlePDF–508K
13.
The Biochemical Role of the Human NEIL1 and NEIL3 DNA Glycosylases on Model DNA Replication Forks
Mustafa S. Albelazi, Peter R. Martin, Soran Mohammed, Luciano Mutti, Jason L. Parsons, Rhoderick H. Elder
Genes (Basel) 2019 Apr; 10(4): 315. Published online 2019 Apr 23. doi: 10.3390/genes10040315
PMCID:
PMC6523847
AbstractArticlePDF–2.5M
14.
The fifth domain in the G-quadruplex-forming sequence of the human NEIL3 promoter locks DNA folding in response to oxidative damage
Carla Alvarez Omaga, Aaron M. Fleming, Cynthia J. Burrows
Biochemistry. Author manuscript; available in PMC 2019 May 22.
Published in final edited form as: Biochemistry. 2018 May 22; 57(20): 2958–2970. Published online 2018 May 10. doi: 10.1021/acs.biochem.8b00226
PMCID:
PMC6002760
AbstractArticlePDF–1003K
15.
Monitoring of the spatial and temporal dynamics of BER/SSBR pathway proteins, including MYH, UNG2, MPG, NTH1 and NEIL1-3, during DNA replication
Karine Ø. Bjørås, Mirta M. L. Sousa, Animesh Sharma, Davi M. Fonseca, Caroline K. Søgaard, Magnar Bjørås, Marit Otterlei
Nucleic Acids Res. 2017 Aug 21; 45(14): 8291–8301. Published online 2017 May 29. doi: 10.1093/nar/gkx476
PMCID:
PMC5737410
AbstractArticlePDF–2.4M
16.
The Human DNA glycosylases NEIL1 and NEIL3 Excise Psoralen-Induced DNA-DNA Cross-Links in a Four-Stranded DNA Structure
Peter R. Martin, Sophie Couvé, Caroline Zutterling, Mustafa S. Albelazi, Regina Groisman, Bakhyt T. Matkarimov, Jason L. Parsons, Rhoderick H. Elder, Murat K. Saparbaev
Sci Rep. 2017; 7: 17438. Published online 2017 Dec 12. doi: 10.1038/s41598-017-17693-4
PMCID:
PMC5727206
AbstractArticlePDF–2.3M
17.
NEIL3 repairs telomere damage during S phase to secure chromosome segregation at mitosis
Jia Zhou, Jany Chan, Marie Lambelé, Timur Yusufzai, Jason Stumpff, Patricia L. Opresko, Markus Thali, Susan S Wallace
Cell Rep. Author manuscript; available in PMC 2017 Sep 20.
Published in final edited form as: Cell Rep. 2017 Aug 29; 20(9): 2044–2056. doi: 10.1016/j.celrep.2017.08.020
PMCID:
PMC5606162
AbstractArticlePDF–2.6M
18.
A genome-wide analysis of gene–caffeine consumption interaction on basal cell carcinoma
Xin Li, Marilyn C. Cornelis, Liming Liang, Fengju Song, Immaculata De Vivo, Edward Giovannucci, Jean Y. Tang, Jiali Han
Carcinogenesis. 2016 Dec; 37(12): 1138–1143. Published online 2016 Oct 8. doi: 10.1093/carcin/bgw107
PMCID:
PMC5137266
AbstractArticlePDF–116K
19.
Deficiency of base excision repair enzyme NEIL3 drives increased predisposition to autoimmunity
Michel J. Massaad, Jia Zhou, Daisuke Tsuchimoto, Janet Chou, Haifa Jabara, Erin Janssen, Salomé Glauzy, Brennan G. Olson, Henner Morbach, Toshiro K. Ohsumi, Klaus Schmitz, Markianos Kyriacos, Jennifer Kane, Kumiko Torisu, Yusaku Nakabeppu, Luigi D. Notarangelo, Eliane Chouery, Andre Megarbane, Peter B. Kang, Eman Al-Idrissi, Hasan Aldhekri, Eric Meffre, Masayuki Mizui, George C. Tsokos, John P. Manis, Waleed Al-Herz, Susan S. Wallace, Raif S. Geha
J Clin Invest. 2016 Nov 1; 126(11): 4219–4236. Published online 2016 Oct 17. doi: 10.1172/JCI85647
PMCID:
PMC5096910
AbstractArticlePDF–5.5M
20.
Single Nucleotide Polymorphisms in the REG-CTNNA2 region of chromosome 2 and NEIL3 associated with impulsivity in a Native American sample
Cindy L. Ehlers, Ian R. Gizer, Chris Bizon, Wendy Slutske, Qian Peng, Nicholas J. Schork, Kirk C. Wilhelmsen
Genes Brain Behav. Author manuscript; available in PMC 2017 Jul 1.
Published in final edited form as: Genes Brain Behav. 2016 Jul; 15(6): 568–577. Published online 2016 Jun 1. doi: 10.1111/gbb.12297
PMCID:
PMC4935619
AbstractArticlePDF–705K

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