PMC Links for GEO Profiles (Select 566227) - PMC

Select item 42106031.

HilA-like regulators in Escherichia coli pathotypes: the YgeH protein from the enteroaggregative strain 042

Mário Hüttener, Manuela Dietrich, Sònia Paytubi, Antonio Juárez

BMC Microbiol. 2014; 14: 268. Published online 2014 Oct 25. doi: 10.1186/s12866-014-0268-5

PMCID:: PMC4210603

Select item 41238552.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 18745933.

Visualizing the proteome of Escherichia coli: an efficient and versatile method for labeling chromosomal coding DNA sequences (CDSs) with fluorescent protein genes

Rory M. Watt, Jing Wang, Meikid Leong, Hsiang-fu Kung, Kathryn S.E. Cheah, Depei Liu, Antoine Danchin, Jian-Dong Huang

Nucleic Acids Res. 2007 Mar; 35(6): e37. Published online 2007 Jan 31. doi: 10.1093/nar/gkl1158

PMCID:: PMC1874593

Abstract Article PDF–5.3M

Select item 16814814.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 14570525.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 13252006.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 12912717.

A Degenerate Type III Secretion System from Septicemic Escherichia coli Contributes to Pathogenesis

Diana Ideses, Uri Gophna, Yossi Paitan, Roy R. Chaudhuri, Mark J. Pallen, Eliora Z. Ron

J Bacteriol. 2005 Dec; 187(23): 8164–8171. doi: 10.1128/JB.187.23.8164-8171.2005

PMCID:: PMC1291271

Abstract Article PDF–421K

Select item 5442498.

Phenotypic Screening of Escherichia coli K-12 Tn5 Insertion Libraries, Using Whole-Genome Oligonucleotide Microarrays

Kelly M. Winterberg, John Luecke, Amanda S. Bruegl, William S. Reznikoff

Appl Environ Microbiol. 2005 Jan; 71(1): 451–459. doi: 10.1128/AEM.71.1.451-459.2005

PMCID:: PMC544249

Abstract Article PDF–313K

Select item 4157519.

The ETT2 Gene Cluster, Encoding a Second Type III Secretion System from Escherichia coli, Is Present in the Majority of Strains but Has Undergone Widespread Mutational Attrition

Chuan-Peng Ren, Roy R. Chaudhuri, Amanda Fivian, Christopher M. Bailey, Martin Antonio, Wayne M. Barnes, Mark J. Pallen

J Bacteriol. 2004 Jun; 186(11): 3547–3560. doi: 10.1128/JB.186.11.3547-3560.2004

PMCID:: PMC415751

Abstract Article PDF–2.9M

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