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Select item 107001381.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 102333682.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 98602543.

Structure of the NuA4 histone acetyltransferase complex

Liting Ji, Lixia Zhao, Ke Xu, Huihan Gao, Yang Zhou, Roger D. Kornberg, Heqiao Zhang

Proc Natl Acad Sci U S A. 2022 Nov 29; 119(48): e2214313119. Published online 2022 Nov 22. doi: 10.1073/pnas.2214313119

PMCID:: PMC9860254

Abstract Article PDF–3.6M

Select item 96430084.

Structure and flexibility of the yeast NuA4 histone acetyltransferase complex

Stefan A Zukin, Matthew R Marunde, Irina K Popova, Katarzyna M Soczek, Eva Nogales, Avinash B Patel

eLife. 2022; 11: e81400. Published online 2022 Oct 20. doi: 10.7554/eLife.81400

PMCID:: PMC9643008

Abstract Article PDF–12M

Select item 96309865.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 92098116.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 75074027.

Systematic analysis of bypass suppression of essential genes

Jolanda van Leeuwen, Carles Pons, Guihong Tan, Zi Yang Wang, Jing Hou, Jochen Weile, Marinella Gebbia, Wendy Liang, Ermira Shuteriqi, Zhijian Li, Maykel Lopes, Matej Ušaj, Andreia Dos Santos Lopes, Natascha van Lieshout, Chad L Myers, Frederick P Roth, Patrick Aloy, Brenda J Andrews, Charles Boone

Mol Syst Biol. 2020 Sep; 16(9): e9828. Published online 2020 Sep 17. doi: 10.15252/msb.20209828

PMCID:: PMC7507402

Abstract Article PDF–1.9M

Select item 69375678.

Gcn5 and Esa1 function as histone crotonyltransferases to regulate crotonylation-dependent transcription

Leonie Kollenstart, Anton J. L. de Groot, George M. C. Janssen, Xue Cheng, Kees Vreeken, Fabrizio Martino, Jacques Côté, Peter A. van Veelen, Haico van Attikum

J Biol Chem. 2019 Dec 27; 294(52): 20122–20134. Published online 2019 Nov 7. doi: 10.1074/jbc.RA119.010302

PMCID:: PMC6937567

Abstract Article PDF–2.8M

Select item 68893839.

ING3 is required for ATM signaling and DNA repair in response to DNA double strand breaks

Audrey Mouche, Jérôme Archambeau, Charles Ricordel, Laura Chaillot, Nicolas Bigot, Thierry Guillaudeux, Muriel Grenon, Rémy Pedeux

Cell Death Differ. 2019 Nov; 26(11): 2344–2357. Published online 2019 Feb 25. doi: 10.1038/s41418-019-0305-x

PMCID:: PMC6889383

Abstract Article PDF–4.8M

Select item 631248410.

NuA4 acetyltransferase is required for efficient nucleotide excision repair in yeast

Amelia J. Hodges, Dalton A. Plummer, John J. Wyrick

DNA Repair (Amst) Author manuscript; available in PMC 2020 Jan 1.

Published in final edited form as: DNA Repair (Amst). 2019 Jan; 73: 91–98. Published online 2018 Nov 14. doi: 10.1016/j.dnarep.2018.11.006

PMCID:: PMC6312484

Abstract Article PDF–1.3M

Select item 629136611.

The cellular economy of the Saccharomyces cerevisiae zinc proteome

Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide

Metallomics. Author manuscript; available in PMC 2019 Dec 12.

Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j

PMCID:: PMC6291366

Abstract Article PDF–3.0M

Select item 617663112.

Phospho-dependent recruitment of the yeast NuA4 acetyltransferase complex by MRX at DNA breaks regulates RPA dynamics during resection

Xue Cheng, Olivier Jobin-Robitaille, Pierre Billon, Rémi Buisson, Hengyao Niu, Nicolas Lacoste, Nebiyu Abshiru, Valérie Côté, Pierre Thibault, Stephen J. Kron, Patrick Sung, Christopher J. Brandl, Jean-Yves Masson, Jacques Côté

Proc Natl Acad Sci U S A. 2018 Oct 2; 115(40): 10028–10033. Published online 2018 Sep 17. doi: 10.1073/pnas.1806513115

PMCID:: PMC6176631

Abstract Article PDF–1.1M

Select item 590259413.

Molecular Architecture of the Essential Yeast Histone Acetyltransferase Complex NuA4 Redefines Its Multimodularity

Dheva Setiaputra, Salar Ahmad, Udit Dalwadi, Anne-Lise Steunou, Shan Lu, James D. Ross, Meng-Qiu Dong, Jacques Côté, Calvin K. Yip

Mol Cell Biol. 2018 May 1; 38(9): e00570-17. Prepublished online 2018 Feb 20. Published online 2018 Apr 16. doi: 10.1128/MCB.00570-17

PMCID:: PMC5902594

Abstract Article PDF–3.8M

Select item 586112014.

Architecture of the Saccharomyces cerevisiae NuA4/TIP60 complex

Xuejuan Wang, Salar Ahmad, Zhihui Zhang, Jacques Côté, Gang Cai

Nat Commun. 2018; 9: 1147. Published online 2018 Mar 20. doi: 10.1038/s41467-018-03504-5

PMCID:: PMC5861120

Abstract Article PDF–3.1M

Select item 576535915.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 575284516.

Landscape of the regulatory elements for lysine 2-hydroxyisobutyrylation pathway

He Huang, Zhouqing Luo, Shankang Qi, Jing Huang, Peng Xu, Xiuxuan Wang, Li Gao, Fangyi Li, Jian Wang, Wenhui Zhao, Wei Gu, Zhucheng Chen, Lunzhi Dai, Junbiao Dai, Yingming Zhao

Cell Res. 2018 Jan; 28(1): 111–125. Published online 2017 Dec 1. doi: 10.1038/cr.2017.149

PMCID:: PMC5752845

Abstract Article PDF–4.1M

Select item 534032817.

Chromatin Regulation by the NuA4 Acetyltransferase Complex Is Mediated by Essential Interactions Between Enhancer of Polycomb (Epl1) and Esa1

Naomi E. Searle, Ana Lilia Torres-Machorro, Lorraine Pillus

Genetics. 2017 Mar; 205(3): 1125–1137. Published online 2017 Jan 19. doi: 10.1534/genetics.116.197830

PMCID:: PMC5340328

Abstract Article PDF–1.9M

Select item 508651918.

Combined Action of Histone Reader Modules Regulates NuA4 Local Acetyltransferase Function but Not Its Recruitment on the Genome

Anne-Lise Steunou, Myriam Cramet, Dorine Rossetto, Maria J. Aristizabal, Nicolas Lacoste, Simon Drouin, Valérie Côté, Eric Paquet, Rhea T. Utley, Nevan Krogan, François Robert, Michael S. Kobor, Jacques Côté

Mol Cell Biol. 2016 Nov 15; 36(22): 2768–2781. Prepublished online 2016 Aug 22. Published online 2016 Oct 28. doi: 10.1128/MCB.00112-16