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Items: 1 to 20 of 43

1.
Potency of CRISPR-Cas Antifungals Is Enhanced by Cotargeting DNA Repair and Growth Regulatory Machinery at the Genetic Level
Brian J. Mendoza, Xianliang Zheng, Jared C. Clements, Christopher Cotter, Cong T. Trinh
ACS Infect Dis. 2023 Dec 8; 9(12): 2494–2503. Published online 2023 Nov 13. doi: 10.1021/acsinfecdis.3c00342
PMCID:
PMC10714396
AbstractArticlePDF–4.4M
2.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
3.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
4.
A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans
Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor
Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136
PMCID:
PMC9630986
AbstractArticlePDF–2.2M
5.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
6.
Systematic Screening of Penetratin’s Protein Targets by Yeast Proteome Microarrays
Pramod Shah, Chien-Sheng Chen
Int J Mol Sci. 2022 Jan; 23(2): 712. Published online 2022 Jan 10. doi: 10.3390/ijms23020712
PMCID:
PMC8775591
AbstractArticlePDF–5.0M
7.
Antagonistic relationship of NuA4 with the non-homologous end-joining machinery at DNA damage sites
Salar Ahmad, Valérie Côté, Xue Cheng, Gaëlle Bourriquen, Vasileia Sapountzi, Mohammed Altaf, Jacques Côté
PLoS Genet. 2021 Sep; 17(9): e1009816. Published online 2021 Sep 20. doi: 10.1371/journal.pgen.1009816
PMCID:
PMC8483352
AbstractArticlePDF–2.7M
8.
A nuclear proteome localization screen reveals the exquisite specificity of Gpn2 in RNA polymerase biogenesis
Sean W. Minaker, Megan C. Kofoed, Philip Hieter, Peter C. Stirling
Cell Cycle. 2021; 20(14): 1361–1373. Published online 2021 Jun 28. doi: 10.1080/15384101.2021.1943879
PMCID:
PMC8344759
AbstractArticlePDF–4.4M
9.
Mechanism of MRX inhibition by Rif2 at telomeres
Florian Roisné-Hamelin, Sabrina Pobiega, Kévin Jézéquel, Simona Miron, Jordane Dépagne, Xavier Veaute, Didier Busso, Marie-Hélène Le Du, Isabelle Callebaut, Jean-Baptiste Charbonnier, Philippe Cuniasse, Sophie Zinn-Justin, Stéphane Marcand
Nat Commun. 2021; 12: 2763. Published online 2021 May 12. doi: 10.1038/s41467-021-23035-w
PMCID:
PMC8115599
AbstractArticlePDF–3.9M
10.
Behavior of dicentric chromosomes in budding yeast
Diana Cook, Sarah Long, John Stanton, Patrick Cusick, Colleen Lawrimore, Elaine Yeh, Sarah Grant, Kerry Bloom
PLoS Genet. 2021 Mar; 17(3): e1009442. Published online 2021 Mar 18. doi: 10.1371/journal.pgen.1009442
PMCID:
PMC8009378
AbstractArticlePDF–1.5M
11.
Replication-independent instability of Friedreich’s ataxia GAA repeats during chronological aging
Alexander J. Neil, Julia A. Hisey, Ishtiaque Quasem, Ryan J. McGinty, Marcin Hitczenko, Alexandra N. Khristich, Sergei M. Mirkin
Proc Natl Acad Sci U S A. 2021 Feb 2; 118(5): e2013080118. Published online 2021 Jan 25. doi: 10.1073/pnas.2013080118
PMCID:
PMC7865128
AbstractArticlePDF–1.4M
12.
A new linear cyclin docking motif that mediates exclusively S‐phase CDK‐specific signaling
Ilona Faustova, Luka Bulatovic, Frida Matiyevskaya, Ervin Valk, Mihkel Örd, Mart Loog
EMBO J. 2021 Jan 15; 40(2): e105839. Published online 2020 Nov 19. doi: 10.15252/embj.2020105839
PMCID:
PMC7809796
AbstractArticlePDF–1.9M
13.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
14.
Distinct roles for S. cerevisiae H2A copies in recombination and repeat stability, with a role for H2A.1 threonine 126
Nealia CM House, Erica J Polleys, Ishtiaque Quasem, Marjorie De la Rosa Mejia, Cailin E Joyce, Oliver Takacsi-Nagy, Jocelyn E Krebs, Stephen M Fuchs, Catherine H Freudenreich
eLife. 2019; 8: e53362. Published online 2019 Dec 5. doi: 10.7554/eLife.53362
PMCID:
PMC6927750
AbstractArticlePDF–3.2M
15.
Ku DNA End-Binding Activity Promotes Repair Fidelity and Influences End-Processing During Nonhomologous End-Joining in Saccharomyces cerevisiae
Charlene H. Emerson, Christopher R. Lopez, Albert Ribes-Zamora, Erica J. Polleys, Christopher L. Williams, Lythou Yeo, Jacques E. Zaneveld, Rui Chen, Alison A. Bertuch
Genetics. 2018 May; 209(1): 115–128. Published online 2018 Mar 2. doi: 10.1534/genetics.117.300672
PMCID:
PMC5937190
AbstractArticlePDF–2.0M
16.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
17.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
18.
The non-homologous end-joining factor Nej1 inhibits resection mediated by Dna2–Sgs1 nuclease-helicase at DNA double strand breaks
Kyle S. Sorenson, Brandi L. Mahaney, Susan P. Lees-Miller, Jennifer A. Cobb
J Biol Chem. 2017 Sep 1; 292(35): 14576–14586. Published online 2017 Jul 5. doi: 10.1074/jbc.M117.796011
PMCID:
PMC5582849
AbstractArticlePDF–1.7M
19.
A network of conserved synthetic lethal interactions for exploration of precision cancer therapy
Rohith Srivas, John Paul Shen, Chih Cheng Yang, Su Ming Sun, Jianfeng Li, Andrew M. Gross, James Jensen, Katherine Licon, Ana Bojorquez-Gomez, Kristin Klepper, Justin Huang, Daniel Pekin, Jia L. Xu, Huwate Yeerna, Vignesh Sivaganesh, Leonie Kollenstart, Haico van Attikum, Pedro Aza-Blanc, Robert W. Sobol, Trey Ideker
Mol Cell. Author manuscript; available in PMC 2017 Aug 4.
Published in final edited form as: Mol Cell. 2016 Aug 4; 63(3): 514–525. Published online 2016 Jul 21. doi: 10.1016/j.molcel.2016.06.022
PMCID:
PMC5209245
AbstractArticlePDF–1.6M
20.
Role of the yeast DNA repair protein Nej1 in end processing during the repair of DNA double strand breaks by non-homologous end joining
Hui Yang, Yoshihiro Matsumoto, Kelly M. Trujillo, Susan P. Lees-Miller, Mary Ann Osley, Alan E. Tomkinson
DNA Repair (Amst) Author manuscript; available in PMC 2016 Sep 27.
Published in final edited form as: DNA Repair (Amst). 2015 Jul; 31: 1–10. Published online 2015 Apr 21. doi: 10.1016/j.dnarep.2015.04.003
PMCID:
PMC5038981
AbstractArticlePDF–909K

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