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Items: 1 to 20 of 23

1.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
2.
DNA-driven condensation assembles the meiotic DNA break machinery
Corentin Claeys Bouuaert, Stephen Pu, Juncheng Wang, Cédric Oger, Dima Daccache, Wei Xie, Dinshaw J. Patel, Scott Keeney
Nature. Author manuscript; available in PMC 2021 Sep 17.
Published in final edited form as: Nature. 2021 Apr; 592(7852): 144–149. Published online 2021 Mar 17. doi: 10.1038/s41586-021-03374-w
PMCID:
PMC8016751
AbstractArticlePDF–4.0M
3.
Structural and functional characterization of the Spo11 core complex
Corentin Claeys Bouuaert, Sam E. Tischfield, Stephen Pu, Eleni P. Mimitou, Ernesto Arias-Palomo, James M. Berger, Scott Keeney
Nat Struct Mol Biol. Author manuscript; available in PMC 2021 Jul 4.
Published in final edited form as: Nat Struct Mol Biol. 2021 Jan; 28(1): 92–102. Published online 2021 Jan 4. doi: 10.1038/s41594-020-00534-w
PMCID:
PMC7855791
AbstractArticlePDF–5.4M
4.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
5.
The nucleotide sequence of Saccharomyces cerevisiae chromosome XII
M. Johnston, L. Hillier, L. Riles, other members of the Genome Sequencing Center, K. Albermann, B. André, W. Ansorge, V. Benes, M. Brückner, H. Delius, E. Dubois, A. Düsterhöft, K.-D. Entian, M. Floeth, A. Goffeau, U. Hebling, K. Heumann, D. Heuss-Neitzel, H. Hilbert, F. Hilger, K. Kleine, P. Kötter, E. J. Louis, F. Messenguy, H. W. Mewes, T. Miosga, D. Möstl, S. Müller-Auer, U. Nentwich, B. Obermaier, E. Piravandi, T. M. Pohl, D. Portetelle, B. Purnelle, S. Rechmann, M. Rieger, M. Rinke, M. Rose, M. Scharfe, B. Scherens, P. Scholler, C. Schwager, S. Schwarz, A. P. Underwood, L. A. Urrestarazu, M. Vandenbol, P. Verhasselt, F. Vierendeels, M Voet, G. Volckaert, H. Voss, R. Wambutt, E. Wedler, H. Wedler, F. K. Zimmermann, A. Zollner, J. Hani, J. D. Hoheisel
Nature. Author manuscript; available in PMC 2019 Jul 9.
Published in final edited form as: Nature. 1997 May 29; 387(6632 Suppl): 87–90.
PMCID:
PMC6615710
AbstractArticlePDF–424K
6.
Systematic Analysis of Complex Genetic Interactions
Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers
Science. Author manuscript; available in PMC 2018 Nov 4.
Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729
PMCID:
PMC6215713
AbstractArticlePDF–1.9M
7.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
8.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
9.
Loss of Cardiolipin Leads to Perturbation of Acetyl-CoA Synthesis
Vaishnavi Raja, Amit S. Joshi, Guiling Li, Krishna Rao Maddipati, Miriam L. Greenberg
J Biol Chem. 2017 Jan 20; 292(3): 1092–1102. Published online 2016 Dec 9. doi: 10.1074/jbc.M116.753624
PMCID:
PMC5247643
AbstractArticlePDF–1.3M
10.
The Yeast SR-Like Protein Npl3 Links Chromatin Modification to mRNA Processing
Erica A. Moehle, Colm J. Ryan, Nevan J. Krogan, Tracy L. Kress, Christine Guthrie
PLoS Genet. 2012 Nov; 8(11): e1003101. Published online 2012 Nov 29. doi: 10.1371/journal.pgen.1003101
PMCID:
PMC3510044
AbstractArticlePDF–3.4M
11.
Integration of a splicing regulatory network within the meiotic gene expression program of Saccharomyces cerevisiae
Elizabeth M. Munding, A. Haller Igel, Lily Shiue, Kristel M. Dorighi, Lisa R. Treviño, Manuel Ares, Jr
Genes Dev. 2010 Dec 1; 24(23): 2693–2704. doi: 10.1101/gad.1977410
PMCID:
PMC2994042
AbstractArticlePDF–895K
12.
Exon sequences at the splice junctions affect splicing fidelity and alternative splicing
Luciana B. Crotti, David S. Horowitz
Proc Natl Acad Sci U S A. 2009 Nov 10; 106(45): 18954–18959. Published online 2009 Oct 23. doi: 10.1073/pnas.0907948106
PMCID:
PMC2776460
AbstractArticlePDF–1.1M
13.
Tethering Recombination Initiation Proteins in Saccharomyces cerevisiae Promotes Double Strand Break Formation
Demelza R. Koehn, Stuart J. Haring, Jaime M. Williams, Robert E. Malone
Genetics. 2009 Jun; 182(2): 447–458. doi: 10.1534/genetics.109.102640
PMCID:
PMC2691754
AbstractArticlePDF–1.4M
14.
Association of yeast Upf1p with direct substrates of the NMD pathway
Marcus J. O. Johansson, Feng He, Phyllis Spatrick, Chunfang Li, Allan Jacobson
Proc Natl Acad Sci U S A. 2007 Dec 26; 104(52): 20872–20877. Published online 2007 Dec 17. doi: 10.1073/pnas.0709257105
PMCID:
PMC2409234
AbstractArticlePDF–864K
15.
Interactions between Mei4, Rec114, and other proteins required for meiotic DNA double-strand break formation in Saccharomyces cerevisiae
Shohreh Maleki, Matthew J. Neale, Charanjit Arora, Kiersten A. Henderson, Scott Keeney
Chromosoma. Author manuscript; available in PMC 2007 Nov 21.
Published in final edited form as: Chromosoma. 2007 Oct; 116(5): 471–486. Published online 2007 Jun 9. doi: 10.1007/s00412-007-0111-y
PMCID:
PMC2084462
AbstractArticlePDF–2.9M
16.
Functional interactions between SPO11 and REC102 during initiation of meiotic recombination in Saccharomyces cerevisiae.
Kehkooi Kee, Scott Keeney
Genetics. 2002 Jan; 160(1): 111–122. doi: 10.1093/genetics/160.1.111
PMCID:
PMC1461935
SummaryPDF–256K
17.
Suppressor analysis of the Saccharomyces cerevisiae gene REC104 reveals a genetic interaction with REC102.
L Salem, N Walter, R Malone
Genetics. 1999 Apr; 151(4): 1261–1272. doi: 10.1093/genetics/151.4.1261
PMCID:
PMC1460571
SummaryPDF–274K
18.
The Rec102 Mutant of Yeast Is Defective in Meiotic Recombination and Chromosome Synapsis
J. Bhargava, J. A. Engebrecht, G. S. Roeder
Genetics. 1992 Jan; 130(1): 59–69. doi: 10.1093/genetics/130.1.59
PMCID:
PMC1204805
SummaryPDF–1.9M
19.
Isolation of Mutants Defective in Early Steps of Meiotic Recombination in the Yeast Saccharomyces Cerevisiae
R. E. Malone, S. Bullard, M. Hermiston, R. Rieger, M. Cool, A. Galbraith
Genetics. 1991 May; 128(1): 79–88. doi: 10.1093/genetics/128.1.79
PMCID:
PMC1204456
SummaryPDF–927K
20.
Loss of Meiotic Rereplication Block in Saccharomyces cerevisiae Cells Defective in Cdc28p Regulation
Lyndi M. Rice, Constantine Plakas, Joseph T. Nickels, Jr.
Eukaryot Cell. 2005 Jan; 4(1): 55–62. doi: 10.1128/EC.4.1.55-62.2005
PMCID:
PMC544154
AbstractArticlePDF–267K

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