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Items: 1 to 20 of 27

1.
Amino acid and protein specificity of protein fatty acylation in C. elegans
Bingsen Zhang, Yan Yu, Bennett W. Fox, Yinong Liu, Venkatesh P. Thirumalaikumar, Aleksandra Skirycz, Hening Lin, Frank C. Schroeder
Proc Natl Acad Sci U S A. 2024 Jan 30; 121(5): e2307515121. Published online 2024 Jan 22. doi: 10.1073/pnas.2307515121
PMCID:
PMC10835129
AbstractArticlePDF–1.4M
2.
Rhotekin regulates axon regeneration through the talin–Vinculin–Vinexin axis in Caenorhabditis elegans
Yoshiki Sakai, Tatsuhiro Shimizu, Mayuka Tsunekawa, Naoki Hisamoto, Kunihiro Matsumoto
PLoS Genet. 2023 Dec; 19(12): e1011089. Published online 2023 Dec 27. doi: 10.1371/journal.pgen.1011089
PMCID:
PMC10752531
AbstractArticlePDF–2.3M
3.
Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans
Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono
J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343
PMCID:
PMC9437848
AbstractArticlePDF–2.0M
4.
A modified TurboID approach identifies tissue-specific centriolar components in C. elegans
Elisabeth Holzer, Cornelia Rumpf-Kienzl, Sebastian Falk, Alexander Dammermann
PLoS Genet. 2022 Apr; 18(4): e1010150. Published online 2022 Apr 20. doi: 10.1371/journal.pgen.1010150
Correction in:
PLoS Genet. 2023 Feb; 19(2): e1010645.
PMCID:
PMC9020716
AbstractArticlePDF–2.0M
5.
Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling
Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono
J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094
Correction in:
J Biol Chem. 2022 Jun; 298(6): 102081.
PMCID:
PMC8446793
AbstractArticlePDF–1.6M
6.
Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules
Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus
eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833
PMCID:
PMC8331183
AbstractArticlePDF–8.5M
7.
An actin-based viscoplastic lock ensures progressive body axis elongation
Alicia Lardennois, Gabriella Pásti, Teresa Ferraro, Flora Llense, Pierre Mahou, Julien Pontabry, David Rodriguez, Samantha Kim, Shoichiro Ono, Emmanuel Beaurepaire, Christelle Gally, Michel Labouesse
Nature. Author manuscript; available in PMC 2021 Apr 30.
Published in final edited form as: Nature. 2019 Sep; 573(7773): 266–270. Published online 2019 Aug 28. doi: 10.1038/s41586-019-1509-4
Correction in:
Nature. 2019 Sep 6
Correction in:
Nature. 2019 Oct 3
PMCID:
PMC8086821
AbstractArticlePDF–1.9M
8.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
9.
Mass spectrometry-based shotgun proteomic analysis of C. elegans protein complexes.
Bryan R Fonslow, James J Moresco, Patricia G Tu, Antti P Aalto, Amy E Pasquinelli, Andrew G Dillin, John R Yates, 3rd
WormBook. 2014 : 1–18. Published online 2014 Jun 24. doi: 10.1895/wormbook.1.171.1
PMCID:
PMC4716738
AbstractArticle
10.
Molecular Characterization of the Caenorhabditis elegans ALP/Enigma gene alp-1
Caroline R. McKeown, Hsiao-Fen Han, Mary C. Beckerle
Dev Dyn. Author manuscript; available in PMC 2015 Jan 21.
Published in final edited form as: Dev Dyn. 2006 Feb; 235(2): 530–538. doi: 10.1002/dvdy.20633
PMCID:
PMC4301592
AbstractArticlePDF–1.0M
11.
Dissection of the Mammalian Midbody Proteome Reveals Conserved Cytokinesis Mechanisms
Ahna R. Skop, Hongbin Liu, John Yates, III, Barbara J. Meyer, Rebecca Heald
Science. Author manuscript; available in PMC 2013 Jun 12.
Published in final edited form as: Science. 2004 Jul 2; 305(5680): 61–66. Published online 2004 May 27. doi: 10.1126/science.1097931
PMCID:
PMC3679889
AbstractArticlePDF–1.5M
12.
SH3 interactome conserves general function over specific form
Xiaofeng Xin, David Gfeller, Jackie Cheng, Raffi Tonikian, Lin Sun, Ailan Guo, Lianet Lopez, Alevtina Pavlenco, Adenrele Akintobi, Yingnan Zhang, Jean-François Rual, Bridget Currell, Somasekar Seshagiri, Tong Hao, Xinping Yang, Yun A Shen, Kourosh Salehi-Ashtiani, Jingjing Li, Aaron T Cheng, Dryden Bouamalay, Adrien Lugari, David E Hill, Mark L Grimes, David G Drubin, Barth D Grant, Marc Vidal, Charles Boone, Sachdev S Sidhu, Gary D Bader
Mol Syst Biol. 2013; 9: 652. Published online 2013 Apr 2. doi: 10.1038/msb.2013.9
PMCID:
PMC3658277
AbstractArticlePDF–2.3M
13.
ZYX-1, the unique zyxin protein of Caenorhabditis elegans, is involved in dystrophin-dependent muscle degeneration
Claire Lecroisey, Nicolas Brouilly, Hiroshi Qadota, Marie-Christine Mariol, Nicolas C. Rochette, Edwige Martin, Guy M. Benian, Laurent Ségalat, Nicole Mounier, Kathrin Gieseler
Mol Biol Cell. 2013 Apr 15; 24(8): 1232–1249. doi: 10.1091/mbc.E12-09-0679
PMCID:
PMC3623643
AbstractArticlePDF–3.9M
14.
Bending Amplitude-- a New Quantitative Assay of C. elegans Locomotion: Identification of Phenotypes for Mutants in Genes Encoding Muscle Focal Adhesion Components
John F. Nahabedian, Hiroshi Qadota, Jeffrey N. Stirman, Hang Lu, Guy M. Benian
Methods. Author manuscript; available in PMC 2013 Jan 1.
Published in final edited form as: Methods. 2012 Jan; 56(1): 95–102. Published online 2011 Nov 22. doi: 10.1016/j.ymeth.2011.11.005
PMCID:
PMC3299906
AbstractArticlePDF–1.0M
15.
The Caenorhabditis elegans paxillin orthologue, PXL-1, is required for pharyngeal muscle contraction and for viability
Adam Warner, Hiroshi Qadota, Guy M. Benian, A. Wayne Vogl, Donald G. Moerman
Mol Biol Cell. 2011 Jul 15; 22(14): 2551–2563. doi: 10.1091/mbc.E10-12-0941
PMCID:
PMC3135480
AbstractArticlePDF–3.1M
16.
OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Daniel D. Shaye, Iva Greenwald
PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Correction in:
PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.
PMCID:
PMC3102077
AbstractArticlePDF–530K
17.
A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding
Nicolas Lenfant, Jolanta Polanowska, Sophie Bamps, Shizue Omi, Jean-Paul Borg, Jérôme Reboul
BMC Genomics. 2010; 11: 671. Published online 2010 Nov 26. doi: 10.1186/1471-2164-11-671
PMCID:
PMC3091786
AbstractArticlePDF–1.2M
18.
Empirically-controlled mapping of the Caenorhabditis elegans protein-protein interactome network
Nicolas Simonis, Jean-François Rual, Anne-Ruxandra Carvunis, Murat Tasan, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Julie M Sahalie, Kavitha Venkatesan, Fana Gebreab, Sebiha Cevik, Niels Klitgord, Changyu Fan, Pascal Braun, Ning Li, Nono Ayivi-Guedehoussou, Elizabeth Dann, Nicolas Bertin, David Szeto, Amélie Dricot, Muhammed A Yildirim, Chenwei Lin, Anne-Sophie de Smet, Huey-Ling Kao, Christophe Simon, Alex Smolyar, Jin Sook Ahn, Muneesh Tewari, Mike Boxem, Stuart Milstein, Haiyuan Yu, Matija Dreze, Jean Vandenhaute, Kristin C Gunsalus, Michael E Cusick, David E Hill, Jan Tavernier, Frederick P Roth, Marc Vidal
Nat Methods. Author manuscript; available in PMC 2011 Mar 15.
Published in final edited form as: Nat Methods. 2009 Jan; 6(1): 47–54. doi: 10.1038/nmeth.1279
PMCID:
PMC3057923
AbstractArticlePDF–3.0M
19.
Molecular Structure of Sarcomere-to-Membrane Attachment at M-Lines in C. elegans Muscle
Hiroshi Qadota, Guy M. Benian
J Biomed Biotechnol. 2010; 2010: 864749. Published online 2010 Apr 19. doi: 10.1155/2010/864749
PMCID:
PMC2857872
AbstractArticlePDF–2.0M
20.
Shifted Transversal Design smart-pooling for high coverage interactome mapping
Xiaofeng Xin, Jean-François Rual, Tomoko Hirozane-Kishikawa, David E. Hill, Marc Vidal, Charles Boone, Nicolas Thierry-Mieg
Genome Res. 2009 Jul; 19(7): 1262–1269. doi: 10.1101/gr.090019.108
PMCID:
PMC2704426
AbstractArticlePDF–855K

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