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Select item 103207661.

A transcriptional cofactor regulatory network for the C. elegans intestine

Brent B Horowitz, Shivani Nanda, Albertha J M Walhout

G3 (Bethesda) 2023 Jul; 13(7): jkad096. Published online 2023 Apr 29. doi: 10.1093/g3journal/jkad096

PMCID:: PMC10320766

Article PDF–1.9M

Select item 83311832.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Article PDF–8.5M

Select item 79951763.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Article PDF–1.0M

Select item 62165904.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Article PDF–1.4M

Select item 61169505.

Using Transcriptomes as Mutant Phenotypes Reveals Functional Regions of a Mediator Subunit in Caenorhabditis elegans

David Angeles-Albores, Paul W. Sternberg

Genetics. 2018 Sep; 210(1): 15–24. Published online 2018 Jul 20. doi: 10.1534/genetics.118.301133

PMCID:: PMC6116950

Article PDF–1.0M

Select item 53847246.

The CDK8 Complex and Proneural Proteins Together Drive Neurogenesis from a Mesodermal Lineage

Shuo Luo, H. Robert Horvitz

Curr Biol. Author manuscript; available in PMC 2018 Mar 6.

Published in final edited form as: Curr Biol. 2017 Mar 6; 27(5): 661–672. Published online 2017 Feb 23. doi: 10.1016/j.cub.2017.01.056

PMCID:: PMC5384724

Article PDF–1.0M

Select item 47882377.

The Mediator Kinase Module Restrains Epidermal Growth Factor Receptor Signaling and Represses Vulval Cell Fate Specification in Caenorhabditis elegans

Jennifer M. Grants, Lisa T. L. Ying, Akinori Yoda, Charlotte C. You, Hideyuki Okano, Hitoshi Sawa, Stefan Taubert

Genetics. 2016 Feb; 202(2): 583–599. Published online 2015 Dec 29. doi: 10.1534/genetics.115.180265

PMCID:: PMC4788237

Article PDF–7.8M

Select item 47815708.

Wnt signaling.

David M Eisenmann

WormBook. 2005 : 1–17. Published online 2005 Jun 25. doi: 10.1895/wormbook.1.7.1

PMCID:: PMC4781570

Article

Select item 47811919.

Transcription mechanisms.

T Keith Blackwell, Amy K Walker

WormBook. 2006 : 1–16. Published online 2006 Sep 5. doi: 10.1895/wormbook.1.121.1

PMCID:: PMC4781191

Article

Select item 478113010.

Vulval development.

Paul W Sternberg

WormBook. 2005 : 1–28. Published online 2005 Jun 25. doi: 10.1895/wormbook.1.6.1

PMCID:: PMC4781130

Article

Select item 478111111.

Transcriptional regulation.

Peter G Okkema, Michael Krause

WormBook. 2005 : 1–40. Published online 2005 Dec 23. doi: 10.1895/wormbook.1.45.1

PMCID:: PMC4781111

Article

Select item 478097712.

RTK/Ras/MAPK signaling.

Meera V Sundaram

WormBook. 2006 : 1–19. Published online 2006 Feb 11. doi: 10.1895/wormbook.1.80.1

PMCID:: PMC4780977

Article

Select item 434449413.

The Mediator complex of Caenorhabditis elegans: insights into the developmental and physiological roles of a conserved transcriptional coregulator

Jennifer M. Grants, Grace Y. S. Goh, Stefan Taubert

Nucleic Acids Res. 2015 Feb 27; 43(4): 2442–2453. Published online 2015 Jan 29. doi: 10.1093/nar/gkv037

PMCID:: PMC4344494

Article PDF–385K

Select item 424594614.

Functional characterization of C. elegans Y-box-binding proteins reveals tissue-specific functions and a critical role in the formation of polysomes

Andreas Arnold, Md Masuder Rahman, Man Chun Lee, Sandra Muehlhaeusser, Iskra Katic, Dimos Gaidatzis, Daniel Hess, Claudia Scheckel, Jane E. Wright, Attila Stetak, Peter R. Boag, Rafal Ciosk

Nucleic Acids Res. 2014 Dec 1; 42(21): 13353–13369. Published online 2014 Nov 5. doi: 10.1093/nar/gku1077

PMCID:: PMC4245946

Article PDF–1.8M

Select item 310207715.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Article PDF–530K

Select item 282480716.

Genome-Wide Identification of Binding Sites Defines Distinct Functions for Caenorhabditis elegans PHA-4/FOXA in Development and Environmental Response

Mei Zhong, Wei Niu, Zhi John Lu, Mihail Sarov, John I. Murray, Judith Janette, Debasish Raha, Karyn L. Sheaffer, Hugo Y. K. Lam, Elicia Preston, Cindie Slightham, LaDeana W. Hillier, Trisha Brock, Ashish Agarwal, Raymond Auerbach, Anthony A. Hyman, Mark Gerstein, Susan E. Mango, Stuart K. Kim, Robert H. Waterston, Valerie Reinke, Michael Snyder

PLoS Genet. 2010 Feb; 6(2): e1000848. Published online 2010 Feb 19. doi: 10.1371/journal.pgen.1000848