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Items: 1 to 20 of 42

1.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
2.
Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability
Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai
Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108
PMCID:
PMC10551700
AbstractArticlePDF–3.7M
3.
A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast
Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger
G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296
PMCID:
PMC9836348
AbstractArticlePDF–857K
4.
Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion
Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton
Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019
PMCID:
PMC9286023
AbstractArticle
5.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
6.
SUMOylation stabilizes sister kinetochore biorientation to allow timely anaphase
Xue Bessie Su, Menglu Wang, Claudia Schaffner, Olga O. Nerusheva, Dean Clift, Christos Spanos, David A. Kelly, Michael Tatham, Andreas Wallek, Yehui Wu, Juri Rappsilber, A. Arockia Jeyaprakash, Zuzana Storchova, Ronald T. Hay, Adèle L. Marston
J Cell Biol. 2021 Jul 5; 220(7): e202005130. Published online 2021 Apr 30. doi: 10.1083/jcb.202005130
PMCID:
PMC8094117
AbstractArticlePDF–8.1M
7.
TORC2-Dependent Ypk1-Mediated Phosphorylation of Lam2/Ltc4 Disrupts Its Association with the β-Propeller Protein Laf1 at Endoplasmic Reticulum-Plasma Membrane Contact Sites in the Yeast Saccharomyces cerevisiae
Magdalena Topolska, Françoise M. Roelants, Edward P. Si, Jeremy Thorner
Biomolecules. 2020 Dec; 10(12): 1598. Published online 2020 Nov 25. doi: 10.3390/biom10121598
PMCID:
PMC7760575
AbstractArticlePDF–3.8M
8.
RNA-binding and prion domains: the Yin and Yang of phase separation
Nieves Lorenzo Gotor, Alexandros Armaos, Giulia Calloni, Marc Torrent Burgas, R Martin Vabulas, Natalia Sanchez De Groot, Gian Gaetano Tartaglia
Nucleic Acids Res. 2020 Sep 25; 48(17): 9491–9504. Published online 2020 Aug 28. doi: 10.1093/nar/gkaa681
PMCID:
PMC7515694
AbstractArticlePDF–3.1M
9.
Proper regulation of inositolphosphorylceramide levels is required for acquirement of low pH resistance in budding yeast
Mikiko Otsu, Moeko Toume, Yutaro Yamaguchi, Motohiro Tani
Sci Rep. 2020; 10: 10792. Published online 2020 Jul 1. doi: 10.1038/s41598-020-67734-8
PMCID:
PMC7329899
AbstractArticlePDF–8.9M
10.
LAM Genes Contribute to Environmental Stress Tolerance but Sensibilize Yeast Cells to Azoles
Svyatoslav S. Sokolov, Margarita A. Vorobeva, Alexandra I. Smirnova, Ekaterina A. Smirnova, Nataliya I. Trushina, Kseniia V. Galkina, Fedor F. Severin, Dmitry A. Knorre
Front Microbiol. 2020; 11: 38. Published online 2020 Jan 28. doi: 10.3389/fmicb.2020.00038
PMCID:
PMC6997477
AbstractArticlePDF–6.7M
11.
Effects of Sterols on the Interaction of SDS, Benzalkonium Chloride, and A Novel Compound, Kor105, with Membranes
Irene Jiménez-Munguía, Pavel E. Volynsky, Oleg V. Batishchev, Sergey A. Akimov, Galina A. Korshunova, Ekaterina A. Smirnova, Dmitry A. Knorre, Sviatoslav S. Sokolov, Fedor F. Severin
Biomolecules. 2019 Oct; 9(10): 627. Published online 2019 Oct 18. doi: 10.3390/biom9100627
PMCID:
PMC6843611
AbstractArticlePDF–4.9M
12.
Novel interconnections of HOG signaling revealed by combined use of two proteomic software packages
Marion Janschitz, Natalie Romanov, Gina Varnavides, David Maria Hollenstein, Gabriela Gérecová, Gustav Ammerer, Markus Hartl, Wolfgang Reiter
Cell Commun Signal. 2019; 17: 66. Published online 2019 Jun 17. doi: 10.1186/s12964-019-0381-z
PMCID:
PMC6572760
AbstractArticlePDF–2.7M
13.
TOR complex 2–regulated protein kinase Ypk1 controls sterol distribution by inhibiting StARkin domain–containing proteins located at plasma membrane–endoplasmic reticulum contact sites
Françoise M. Roelants, Neha Chauhan, Alexander Muir, Jameson C. Davis, Anant K. Menon, Timothy P. Levine, Jeremy Thorner
Mol Biol Cell. 2018 Aug 15; 29(17): 2128–2136. doi: 10.1091/mbc.E18-04-0229
PMCID:
PMC6232965
AbstractArticlePDF–1.9M
14.
Endoplasmic reticulum-plasma membrane contact sites integrate sterol and phospholipid regulation
Evan Quon, Yves Y. Sere, Neha Chauhan, Jesper Johansen, David P. Sullivan, Jeremy S. Dittman, William J. Rice, Robin B. Chan, Gilbert Di Paolo, Christopher T. Beh, Anant K. Menon
PLoS Biol. 2018 May; 16(5): e2003864. Published online 2018 May 21. doi: 10.1371/journal.pbio.2003864
PMCID:
PMC5983861
AbstractArticlePDF–8.8M
15.
Molecular basis for sterol transport by StART‐like lipid transfer domains
Florian A Horenkamp, Diana P Valverde, Jodi Nunnari, Karin M Reinisch
EMBO J. 2018 Mar 15; 37(6): e98002. Published online 2018 Feb 21. doi: 10.15252/embj.201798002
PMCID:
PMC5852651
AbstractArticlePDF–3.8M
16.
Structural basis of sterol recognition and nonvesicular transport by lipid transfer proteins anchored at membrane contact sites
Junsen Tong, Mohammad Kawsar Manik, Young Jun Im
Proc Natl Acad Sci U S A. 2018 Jan 30; 115(5): E856–E865. Published online 2018 Jan 16. doi: 10.1073/pnas.1719709115
PMCID:
PMC5798383
AbstractArticlePDF–1.8M
17.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
18.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
19.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
20.
Histone Acetylation, Not Stoichiometry, Regulates Linker Histone Binding in Saccharomyces cerevisiae
Mackenzie B. D. Lawrence, Nicolas Coutin, Jennifer K. Choi, Benjamin J. E. Martin, Nicholas A. T. Irwin, Barry Young, Christopher Loewen, LeAnn J. Howe
Genetics. 2017 Sep; 207(1): 347–355. Published online 2017 Jul 26. doi: 10.1534/genetics.117.1132
PMCID:
PMC5586383
AbstractArticlePDF–1.4M

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