PMC Links for GEO Profiles (Select 5781062) - PMC

Shalini Menon, Dennis Goldfarb, Chris T. Ho, Erica W. Cloer, Nicholas P. Boyer, Christopher Hardie, Andrew J. Bock, Emma C. Johnson, Joel Anil, M. Ben Major, Stephanie L. Gupton

Mol Biol Cell. 2021 Feb 15; 32(4): 314–330. doi: 10.1091/mbc.E20-10-0622

PMCID:: PMC8098814

Abstract Article PDF–7.7M

Select item 79387704.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 66023005.

New roles for the de-ubiquitylating enzyme OTUD4 in an RNA–protein network and RNA granules

Richa Das, Lukas Schwintzer, Stanislav Vinopal, Eva Aguado Roca, Marc Sylvester, Ana-Maria Oprisoreanu, Susanne Schoch, Frank Bradke, Meike Broemer

J Cell Sci. 2019 Jun 15; 132(12): jcs229252. Published online 2019 Jun 17. doi: 10.1242/jcs.229252

PMCID:: PMC6602300

Abstract Article

Select item 62441836.

Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells

Sunyuan Zhang, Nicholas A. Williamson, Marie A. Bogoyevitch

Sci Data. 2018; 5: 180262. Published online 2018 Nov 20. doi: 10.1038/sdata.2018.262

PMCID:: PMC6244183

Abstract Article PDF–753K

Select item 61859167.

Precisely measured protein lifetimes in the mouse brain reveal differences across tissues and subcellular fractions

Eugenio F. Fornasiero, Sunit Mandad, Hanna Wildhagen, Mihai Alevra, Burkhard Rammner, Sarva Keihani, Felipe Opazo, Inga Urban, Till Ischebeck, M. Sadman Sakib, Maryam K. Fard, Koray Kirli, Tonatiuh Pena Centeno, Ramon O. Vidal, Raza-Ur Rahman, Eva Benito, André Fischer, Sven Dennerlein, Peter Rehling, Ivo Feussner, Stefan Bonn, Mikael Simons, Henning Urlaub, Silvio O. Rizzoli

Nat Commun. 2018; 9: 4230. Published online 2018 Oct 12. doi: 10.1038/s41467-018-06519-0

PMCID:: PMC6185916

Abstract Article PDF–3.1M

Select item 53991188.

The cytoplasmic tail of L-selectin interacts with the adaptor-protein complex AP-1 subunit μ1A via a novel basic binding motif

Karim Dib, Irina G. Tikhonova, Aleksandar Ivetic, Peter Schu

J Biol Chem. 2017 Apr 21; 292(16): 6703–6714. Published online 2017 Feb 24. doi: 10.1074/jbc.M116.768598

PMCID:: PMC5399118

Abstract Article PDF–1.5M

Select item 45718589.

Adaptor Protein-1 Complex Affects the Endocytic Trafficking and Function of Peptidylglycine α-Amidating Monooxygenase, a Luminal Cuproenzyme

Mathilde L. Bonnemaison, Nils Bäck, Megan E. Duffy, Martina Ralle, Richard E. Mains, Betty A. Eipper

J Biol Chem. 2015 Aug 28; 290(35): 21264–21279. Published online 2015 Jul 13. doi: 10.1074/jbc.M115.641027

PMCID:: PMC4571858

Abstract Article PDF–4.1M

Select item 416792410.

AP-1A controls secretory granule biogenesis and trafficking of membrane secretory granule proteins

Mathilde Bonnemaison, Nils Bäck, Yimo Lin, Juan S. Bonifacino, Richard Mains, Betty Eipper

Traffic. Author manuscript; available in PMC 2015 Oct 1.

Published in final edited form as: Traffic. 2014 Oct; 15(10): 1099–1121. Published online 2014 Aug 15. doi: 10.1111/tra.12194

PMCID:: PMC4167924

Abstract Article PDF–2.5M

Select item 407349411.

The Central Role of EED in the Orchestration of Polycomb Group Complexes

Qi Cao, Xiaoju Wang, Meng Zhao, Rendong Yang, Rohit Malik, Yuanyuan Qiao, Anton Poliakov, Anastasia K. Yocum, Yong Li, Wei Chen, Xuhong Cao, Xia Jiang, Arun Dahiya, Clair Harris, Felix Y. Feng, Sundeep Kalantry, Zhaohui S. Qin, Saravana M. Dhanasekaran, Arul M. Chinnaiyan

Nat Commun. Author manuscript; available in PMC 2014 Jul 24.

Published in final edited form as: Nat Commun. 2014; 5: 3127. doi: 10.1038/ncomms4127

PMCID:: PMC4073494

Abstract Article PDF–2.1M

Select item 399243412.

The Adaptor Protein-1 μ1B Subunit Expands the Repertoire of Basolateral Sorting Signal Recognition in Epithelial Cells

Xiaoli Guo, Rafael Mattera, Xuefeng Ren, Yu Chen, Claudio Retamal, Alfonso González, Juan S. Bonifacino

Dev Cell. Author manuscript; available in PMC 2014 Nov 11.

Published in final edited form as: Dev Cell. 2013 Nov 11; 27(3): 353–366. doi: 10.1016/j.devcel.2013.10.006

PMCID:: PMC3992434

Abstract Article PDF–3.0M

Select item 391372513.

Structural Basis for Recruitment and Activation of the AP-1 Clathrin Adaptor Complex by Arf1

Xuefeng Ren, Ginny G. Farias, Bertram J. Canagarajah, Juan S. Bonifacino, James H. Hurley

Cell. Author manuscript; available in PMC 2014 Feb 14.

Published in final edited form as: Cell. 2013 Feb 14; 152(4): 755–767. doi: 10.1016/j.cell.2012.12.042

PMCID:: PMC3913725

Abstract Article PDF–6.7M

Select item 388278614.

Adaptor proteins involved in polarized sorting

Juan S. Bonifacino

J Cell Biol. 2014 Jan 6; 204(1): 7–17. doi: 10.1083/jcb.201310021

PMCID:: PMC3882786

Abstract Article PDF–1.8M

Select item 362009615.

Cell type-specific Rab32 and Rab38 cooperate with the ubiquitous lysosome biogenesis machinery to synthesize specialized lysosome-related organelles

Jarred J. Bultema, Santiago M. Di Pietro

Small GTPases. 2013 Jan 1; 4(1): 16–21. doi: 10.4161/sgtp.22349

PMCID:: PMC3620096

Abstract Article PDF–1.0M

Select item 317805916.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 302253417.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582