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Select item 94509851.

Adaptor SH3BGRL drives autophagy-mediated chemoresistance through promoting PIK3C3 translation and ATG12 stability in breast cancers

Shaoyang Zhang, Xiufeng Liu, Saleh Abdulmomen Ali Mohammed, Hui Li, Wanhua Cai, Wen Guan, Daiyun Liu, Yanli Wei, Dade Rong, Ying Fang, Farhan Haider, Haimei Lv, Ziwei Jin, Xiaomin Chen, Zhuomao Mo, Lujie Li, Shulan Yang, Haihe Wang

Autophagy. 2022; 18(8): 1822–1840. Published online 2021 Dec 6. doi: 10.1080/15548627.2021.2002108

PMCID:: PMC9450985

Abstract Article PDF–9.9M

Select item 94509742.

ATG12 deficiency results in intracellular glutamine depletion, abrogation of tumor hypoxia and a favorable prognosis in cancer

Tom G. Keulers, Alexander Koch, Marike W. van Gisbergen, Lydie M.O. Barbeau, Marijke I. Zonneveld, Monique C. de Jong, Kim G.M. Savelkouls, Roel G. Wanders, Johan Bussink, Veerle Melotte, Kasper M.A. Rouschop

Autophagy. 2022; 18(8): 1898–1914. Published online 2021 Dec 14. doi: 10.1080/15548627.2021.2008690

PMCID:: PMC9450974

Abstract Article PDF–2.9M

Select item 92792853.

Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery

Pierre C. Havugimana, Raghuveera Kumar Goel, Sadhna Phanse, Ahmed Youssef, Dzmitry Padhorny, Sergei Kotelnikov, Dima Kozakov, Andrew Emili

Nat Commun. 2022; 13: 4043. Published online 2022 Jul 13. doi: 10.1038/s41467-022-31809-z

PMCID:: PMC9279285

Abstract Article PDF–2.5M

Select item 91197364.

OpenCell: proteome-scale endogenous tagging enables the cartography of human cellular organization

Nathan H. Cho, Keith C. Cheveralls, Andreas-David Brunner, Kibeom Kim, André C. Michaelis, Preethi Raghavan, Hirofumi Kobayashi, Laura Savy, Jason Y. Li, Hera Canaj, James Y.S. Kim, Edna M. Stewart, Christian Gnann, Frank McCarthy, Joana P. Cabrera, Rachel M. Brunetti, Bryant B. Chhun, Greg Dingle, Marco Y. Hein, Bo Huang, Shalin B. Mehta, Jonathan S. Weissman, Rafael Gómez-Sjöberg, Daniel N. Itzhak, Loic A. Royer, Matthias Mann, Manuel D. Leonetti

Science. Author manuscript; available in PMC 2022 Sep 11.

Published in final edited form as: Science. 2022 Mar 11; 375(6585): eabi6983. Published online 2022 Mar 11. doi: 10.1126/science.abi6983

PMCID:: PMC9119736

Abstract Article PDF–3.3M

Select item 85641305.

LncRNA OIP5-AS1 Promotes the Autophagy-Related Imatinib Resistance in Chronic Myeloid Leukemia Cells by Regulating miR-30e-5p/ATG12 Axis

Hongdan Dai, Jianming Wang, Zhenglan Huang, Hui Zhang, Xin Wang, Qian Li, Wenli Feng

Technol Cancer Res Treat. 2021; 20: 15330338211052150. Published online 2021 Nov 1. doi: 10.1177/15330338211052150

PMCID:: PMC8564130

Abstract Article PDF–3.2M

Select item 81650306.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 75423567.

ISG15 Connects Autophagy and IFN-γ-Dependent Control of Toxoplasma gondii Infection in Human Cells

Jaya Bhushan, Joshua B. Radke, Yi-Chieh Perng, Michael Mcallaster, Deborah J. Lenschow, Herbert W. Virgin, L. David Sibley

mBio. 2020 Sep-Oct; 11(5): e00852-20. Published online 2020 Oct 6. doi: 10.1128/mBio.00852-20

PMCID:: PMC7542356

Abstract Article PDF–2.4M

Select item 74696158.

BIRC5/Survivin is a novel ATG12–ATG5 conjugate interactor and an autophagy-induced DNA damage suppressor in human cancer and mouse embryonic fibroblast cells

Tzu-Yu Lin, Hsiu-Han Chan, Shang-Hung Chen, Sailu Sarvagalla, Pai-Sheng Chen, Mohane Selvaraj Coumar, Siao Muk Cheng, Yung-Chieh Chang, Chun-Hui Lin, Euphemia Leung, Chun Hei Antonio Cheung

Autophagy. 2020; 16(7): 1296–1313. Published online 2019 Oct 15. doi: 10.1080/15548627.2019.1671643

PMCID:: PMC7469615

Abstract Article PDF–15M

Select item 72445729.

ATG12 deficiency leads to tumor cell oncosis owing to diminished mitochondrial biogenesis and reduced cellular bioenergetics

He Liu, Zhaoyue He, Nina Germič, Hyrijie Ademi, Živa Frangež, Andrea Felser, Shuang Peng, Carsten Riether, Valentin Djonov, Jean-Marc Nuoffer, Cédric Bovet, Irena Mlinarič-Raščan, Inti Zlobec, Martin Fiedler, Aurel Perren, Hans-Uwe Simon

Cell Death Differ. 2020 Jun; 27(6): 1965–1980. Published online 2019 Dec 16. doi: 10.1038/s41418-019-0476-5

PMCID:: PMC7244572

Abstract Article PDF–4.2M

Select item 716998310.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 707753611.

PTBP3 promotes malignancy and hypoxia‐induced chemoresistance in pancreatic cancer cells by ATG12 up‐regulation

Jun Ma, Li Weng, Yiping Jia, Bingyan Liu, Shaoqiu Wu, Lei Xue, Xiang Yin, Aiwu Mao, Zhongmin Wang, Mingyi Shang

J Cell Mol Med. 2020 Mar; 24(5): 2917–2930. Published online 2020 Jan 27. doi: 10.1111/jcmm.14896

PMCID:: PMC7077536

Abstract Article PDF–2.3M

Select item 703259312.

Distinct functions of ATG16L1 isoforms in membrane binding and LC3B lipidation in autophagy-related processes

Alf Håkon Lystad, Sven R. Carlsson, Laura R. de la Ballina, Karlina J. Kauffman, Shanta Nag, Tamotsu Yoshimori, J. Thomas Melia, Anne Simonsen

Nat Cell Biol. Author manuscript; available in PMC 2020 Feb 20.

Published in final edited form as: Nat Cell Biol. 2019 Mar; 21(3): 372–383. Published online 2019 Feb 18. doi: 10.1038/s41556-019-0274-9

PMCID:: PMC7032593

Abstract Article PDF–2.4M

Select item 633346013.

ATG5 is required for B cell polarization and presentation of particulate antigens

Florent Arbogast, Johan Arnold, Philippe Hammann, Lauriane Kuhn, Johana Chicher, Diane Murera, Justine Weishaar, Sylviane Muller, Jean-Daniel Fauny, Frédéric Gros

Autophagy. 2019; 15(2): 280–294. Published online 2018 Sep 22. doi: 10.1080/15548627.2018.1516327

PMCID:: PMC6333460

Abstract Article PDF–2.7M

Select item 617205514.

Ambra1 modulates the sensitivity of breast cancer cells to epirubicin by regulating autophagy via ATG12

Wei‐Liang Sun, Li Wang, Jie Luo, Hua‐Wei Zhu, Zheng‐Wen Cai

Cancer Sci. 2018 Oct; 109(10): 3129–3138. Published online 2018 Aug 24. doi: 10.1111/cas.13743

PMCID:: PMC6172055

Abstract Article PDF–1.3M

Select item 607218915.

miR-23a downregulation modulates the inflammatory response by targeting ATG12-mediated autophagy

Xiang Si, Daiyin Cao, Juan Chen, Yao Nie, Zhiyi Jiang, Min-Ying Chen, Jian-Feng Wu, Xiang-Dong Guan

Mol Med Rep. 2018 Aug; 18(2): 1524–1530. Published online 2018 May 29. doi: 10.3892/mmr.2018.9081

PMCID:: PMC6072189

Abstract Article PDF–1.2M

Select item 607001116.

Crosstalk between lysine methylation and phosphorylation of ATG16L1 dictates the apoptosis of hypoxia/reoxygenation-induced cardiomyocytes

Huiwen Song, Xing Feng, Min Zhang, Xian Jin, Xiangdong Xu, Lin Wang, Xue Ding, Yunmei Luo, Fengqin Lin, Qin Wu, Guiyou Liang, Tian Yu, Qigong Liu, Zhiyong Zhang

Autophagy. 2018; 14(5): 825–844. Published online 2018 Apr 10. doi: 10.1080/15548627.2017.1389357