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Select item 101965751.

Quantitative Proteomic Analysis Reveals apoE4-Dependent Phosphorylation of the Actin-Regulating Protein VASP

Zeynep Cakir, Samuel J. Lord, Yuan Zhou, Gwendolyn M. Jang, Benjamin J. Polacco, Manon Eckhardt, David Jimenez-Morales, Billy W. Newton, Adam L. Orr, Jeffrey R. Johnson, Alexandre da Cruz, R. Dyche Mullins, Nevan J. Krogan, Robert W. Mahley, Danielle L. Swaney

Mol Cell Proteomics. 2023 May; 22(5): 100541. Published online 2023 Apr 4. doi: 10.1016/j.mcpro.2023.100541

PMCID:: PMC10196575

Abstract Article PDF–4.5M

Select item 99382162.

Rescue of neuropsychiatric phenotypes in a mouse model of 16p11.2 duplication syndrome by genetic correction of an epilepsy network hub

Marc P. Forrest, Marc Dos Santos, Nicolas H. Piguel, Yi-Zhi Wang, Nicole A. Hawkins, Vikram A. Bagchi, Leonardo E. Dionisio, Sehyoun Yoon, Dina Simkin, Maria Dolores Martin-de-Saavedra, Ruoqi Gao, Katherine E. Horan, Alfred L. George, Jr., Mark S. LeDoux, Jennifer A. Kearney, Jeffrey N. Savas, Peter Penzes

Nat Commun. 2023; 14: 825. Published online 2023 Feb 17. doi: 10.1038/s41467-023-36087-x

PMCID:: PMC9938216

Abstract Article PDF–5.3M

Select item 97389383.

UBA52 Is Crucial in HSP90 Ubiquitylation and Neurodegenerative Signaling during Early Phase of Parkinson’s Disease

Shubhangini Tiwari, Abhishek Singh, Parul Gupta, Sarika Singh

Cells. 2022 Dec; 11(23): 3770. Published online 2022 Nov 25. doi: 10.3390/cells11233770

PMCID:: PMC9738938

Abstract Article PDF–5.5M

Select item 95591744.

Validation of superior reference genes in mouse submandibular glands under developmental and functional regeneration states

Huikai Liu, Liwen He, Qianyu Cheng, Wenping Luo, Tianyu Zhao, Deqin Yang

Int J Mol Med. 2022 Nov; 50(5): 132. Published online 2022 Sep 5. doi: 10.3892/ijmm.2022.5188

PMCID:: PMC9559174

Abstract Article PDF–2.9M

Select item 79387705.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 76883136.

BLOS1 mediates kinesin switch during endosomal recycling of LDL receptor

Chang Zhang, Chanjuan Hao, Guanghou Shui, Wei Li

eLife. 2020; 9: e58069. Published online 2020 Nov 12. doi: 10.7554/eLife.58069

PMCID:: PMC7688313

Abstract Article PDF–9.8M

Select item 74159917.

BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)

Kou Motani, Hidetaka Kosako

J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323

PMCID:: PMC7415991

Abstract Article PDF–2.0M

Select item 67715668.

Biogenesis of lysosome‐related organelles complex‐1 (BORC) regulates late endosomal/lysosomal size through PIKfyve‐dependent phosphatidylinositol‐3,5‐bisphosphate

Teodor E. Yordanov, Victoria E. B. Hipolito, Gudrun Liebscher, Georg F. Vogel, Taras Stasyk, Caroline Herrmann, Stephan Geley, David Teis, Roberto J. Botelho, Michael W. Hess, Lukas A. Huber

Traffic. 2019 Sep; 20(9): 674–696. Published online 2019 Aug 19. doi: 10.1111/tra.12679

PMCID:: PMC6771566

Abstract Article PDF–33M

Select item 63466859.

Plasticity in the Glucagon Interactome Reveals Novel Proteins That Regulate Glucagon Secretion in α-TC1-6 Cells

Farzad Asadi, Savita Dhanvantari

Front Endocrinol (Lausanne) 2018; 9: 792. Published online 2019 Jan 18. doi: 10.3389/fendo.2018.00792

PMCID:: PMC6346685

Abstract Article PDF–3.6M

Select item 624418310.

Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells

Sunyuan Zhang, Nicholas A. Williamson, Marie A. Bogoyevitch

Sci Data. 2018; 5: 180262. Published online 2018 Nov 20. doi: 10.1038/sdata.2018.262

PMCID:: PMC6244183

Abstract Article PDF–753K

Select item 586277111.

A CRISPR-based screen for Hedgehog signaling provides insights into ciliary function and ciliopathies

David K. Breslow, Sascha Hoogendoorn, Adam R. Kopp, David W. Morgens, Brandon K. Vu, Margaret C. Kennedy, Kyuho Han, Amy Li, Gaelen T. Hess, Michael C. Bassik, James K. Chen, Maxence V. Nachury

Nat Genet. Author manuscript; available in PMC 2018 Aug 19.

Published in final edited form as: Nat Genet. 2018 Mar; 50(3): 460–471. Published online 2018 Feb 19. doi: 10.1038/s41588-018-0054-7

PMCID:: PMC5862771

Abstract Article PDF–2.5M

Select item 538122612.

Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function

Tingting Zhang, Wei Du, Andrew F. Wilson, Satoshi H. Namekawa, Paul R. Andreassen, Amom Ruhikanta Meetei, Qishen Pang

Sci Rep. 2017; 7: 45626. Published online 2017 Apr 5. doi: 10.1038/srep45626

PMCID:: PMC5381226

Abstract Article PDF–1.4M

Select item 510319413.

The ubiquitin hybrid gene UBA52 regulates ubiquitination of ribosome and sustains embryonic development

Masanori Kobayashi, Shigeru Oshima, Chiaki Maeyashiki, Yoichi Nibe, Kana Otsubo, Yu Matsuzawa, Yasuhiro Nemoto, Takashi Nagaishi, Ryuichi Okamoto, Kiichiro Tsuchiya, Tetsuya Nakamura, Mamoru Watanabe

Sci Rep. 2016; 6: 36780. Published online 2016 Nov 10. doi: 10.1038/srep36780

PMCID:: PMC5103194

Abstract Article PDF–1.7M

Select item 509485614.

BLOS2 negatively regulates Notch signaling during neural and hematopoietic stem and progenitor cell development

Wenwen Zhou, Qiuping He, Chunxia Zhang, Xin He, Zongbin Cui, Feng Liu, Wei Li

eLife. 2016; 5: e18108. Published online 2016 Oct 10. doi: 10.7554/eLife.18108

PMCID:: PMC5094856

Abstract Article PDF–3.9M

Select item 478810515.

BORC, a Multisubunit Complex that Regulates Lysosome Positioning

Jing Pu, Christina Schindler, Rui Jia, Michal Jarnik, Peter Backlund, Juan S. Bonifacino

Dev Cell. Author manuscript; available in PMC 2016 Apr 20.

Published in final edited form as: Dev Cell. 2015 Apr 20; 33(2): 176–188. doi: 10.1016/j.devcel.2015.02.011

PMCID:: PMC4788105

Abstract Article PDF–3.2M

Select item 425807716.

Ring finger protein20 regulates hepatic lipid metabolism through protein kinase A-dependent sterol regulatory element binding protein1c degradation

Jae Ho Lee, Gha Young Lee, Hagoon Jang, Sung Sik Choe, Seung-Hoi Koo, Jae Bum Kim

Hepatology. 2014 Sep; 60(3): 844–857. Published online 2014 Jul 28. doi: 10.1002/hep.27011

PMCID:: PMC4258077

Abstract Article PDF–1.2M

Select item 380008217.

The BLOS1 interacting protein KXD1 is involved in the biogenesis of lysosome-related organelles

Qing Yang, Xin He, Lin Yang, Zhiyong Zhou, Andrew R. Cullinane, Aihua Wei, Zhe Zhang, Zhenhua Hao, Aili Zhang, Min He, Yaqin Feng, Xiang Gao, William A. Gahl, Marjan Huizing, Wei Li

Traffic. Author manuscript; available in PMC 2013 Oct 19.

Published in final edited form as: Traffic. 2012 Aug; 13(8): 1160–1169. Published online 2012 May 28. doi: 10.1111/j.1600-0854.2012.01375.x

PMCID:: PMC3800082

Abstract Article PDF–1.8M

Select item 357241018.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 336154119.

Loss of epigenetic modification driven by the Foxp3 transcription factor leads to regulatory T cell insufficiency

Matthew L. Bettini, Fan Pan, Maria Bettini, David Finkelstein, Jerold E. Rehg, Stefan Floess, Bryan D. Bell, Steven F. Ziegler, Jochen Huehn, Drew M. Pardoll, Dario A.A. Vignali

Immunity. Author manuscript; available in PMC 2013 May 25.

Published in final edited form as: Immunity. 2012 May 25; 36(5): 717–730. Published online 2012 May 10. doi: 10.1016/j.immuni.2012.03.020

PMCID:: PMC3361541

Abstract Article PDF–2.7M

Select item 317805920.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

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