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Select item 112292331.

Rapid evolution of promoters from germline-specifically expressed genes including transposon silencing factors

David W. J. McQuarrie, Azad Alizada, Benjamin Czech Nicholson, Matthias Soller

BMC Genomics. 2024; 25: 678. Published online 2024 Jul 8. doi: 10.1186/s12864-024-10584-9

PMCID:: PMC11229233

Abstract Article PDF–3.3M

Select item 104388402.

Growth deregulation and interaction with host hemocytes contribute to tumor progression in a Drosophila brain tumor model

Chrysanthi Voutyraki, Alexandros Choromidis, Anastasia Meligkounaki, Nikolaos Andreas Vlachopoulos, Vasiliki Theodorou, Sofia Grammenoudi, Emmanouil Athanasiadis, Sara Monticelli, Angela Giangrande, Christos Delidakis, Evanthia Zacharioudaki

Proc Natl Acad Sci U S A. 2023 Aug 15; 120(33): e2221601120. Published online 2023 Aug 7. doi: 10.1073/pnas.2221601120

PMCID:: PMC10438840

Abstract Article PDF–4.3M

Select item 81337763.

Channel nuclear pore complex subunits are required for transposon silencing in Drosophila

Marzia Munafò, Victoria R Lawless, Alessandro Passera, Serena MacMillan, Susanne Bornelöv, Irmgard U Haussmann, Matthias Soller, Gregory J Hannon, Benjamin Czech

eLife. 2021; 10: e66321. Published online 2021 Apr 15. doi: 10.7554/eLife.66321

PMCID:: PMC8133776

Abstract Article PDF–2.6M

Select item 80422704.

Comprehensive Identification and Alternative Splicing of Microexons in Drosophila

Ting-Lin Pang, Zhan Ding, Shao-Bo Liang, Liang Li, Bei Zhang, Yu Zhang, Yu-Jie Fan, Yong-Zhen Xu

Front Genet. 2021; 12: 642602. Published online 2021 Mar 30. doi: 10.3389/fgene.2021.642602

PMCID:: PMC8042270

Abstract Article PDF–3.6M

Select item 79568385.

piRNAs as Modulators of Disease Pathogenesis

Kayla J. Rayford, Ayorinde Cooley, Jelonia T. Rumph, Ashutosh Arun, Girish Rachakonda, Fernando Villalta, Maria F. Lima, Siddharth Pratap, Smita Misra, Pius N. Nde

Int J Mol Sci. 2021 Mar; 22(5): 2373. Published online 2021 Feb 27. doi: 10.3390/ijms22052373

PMCID:: PMC7956838

Abstract Article PDF–1.2M

Select item 76011716.

Diverse Defenses: A Perspective Comparing Dipteran Piwi-piRNA Pathways

Stephanie Gamez, Satyam Srivastav, Omar S. Akbari, Nelson C. Lau

Cells. 2020 Oct; 9(10): 2180. Published online 2020 Sep 27. doi: 10.3390/cells9102180

PMCID:: PMC7601171

Abstract Article PDF–2.4M

Select item 75305347.

Retrovirus reactivation in CHMP2B^Intron5 models of frontotemporal dementia

Laura Fort-Aznar, Chris Ugbode, Sean T Sweeney

Hum Mol Genet. 2020 Aug 15; 29(16): 2637–2646. Published online 2020 Jul 6. doi: 10.1093/hmg/ddaa142

PMCID:: PMC7530534

Abstract Article PDF–1.1M

Select item 73371858.

piRNA and Transposon Dynamics in Drosophila: A Female Story

Bastien Saint-Leandre, Pierre Capy, Aurelie Hua-Van, Jonathan Filée

Genome Biol Evol. 2020 Jun; 12(6): 931–947. Published online 2020 May 12. doi: 10.1093/gbe/evaa094

PMCID:: PMC7337185

Abstract Article PDF–1.6M

Select item 70015049.

Armitage determines Piwi−piRISC processing from precursor formation and quality control to inter‐organelle translocation

Haruna Yamashiro, Mayu Negishi, Tatsuki Kinoshita, Hirotsugu Ishizu, Hitoshi Ohtani, Mikiko C Siomi

EMBO Rep. 2020 Feb 5; 21(2): e48769. Published online 2019 Dec 12. doi: 10.15252/embr.201948769

PMCID:: PMC7001504

Abstract Article PDF–1.0M

Select item 697440510.

The piRNA pathway in Drosophila ovarian germ and somatic cells

Kaoru SATO, Mikiko C. SIOMI

Proc Jpn Acad Ser B Phys Biol Sci. 2020 Jan 10; 96(1): 32–42. doi: 10.2183/pjab.96.003

PMCID:: PMC6974405

Abstract Article PDF–2.3M

Select item 695843911.

Assembly and Function of Gonad-Specific Non-Membranous Organelles in Drosophila piRNA Biogenesis

Shigeki Hirakata, Mikiko C. Siomi

Noncoding RNA. 2019 Dec; 5(4): 52. Published online 2019 Nov 6. doi: 10.3390/ncrna5040052

PMCID:: PMC6958439

Abstract Article PDF–1.6M

Select item 663635612.

The RNA-binding ATPase, Armitage, Couples piRNA Amplification in Nuage to Phased piRNA Production on Mitochondria

Daniel Tianfang Ge, Wei Wang, Cindy Tipping, Ildar Gainetdinov, Zhiping Weng, Phillip D. Zamore

Mol Cell. Author manuscript; available in PMC 2020 Jun 6.

Published in final edited form as: Mol Cell. 2019 Jun 6; 74(5): 982–995.e6. Published online 2019 May 7. doi: 10.1016/j.molcel.2019.04.006

PMCID:: PMC6636356

Abstract Article PDF–1.4M

Select item 660701113.

Requirements for multivalent Yb body assembly in transposon silencing in Drosophila

Shigeki Hirakata, Hirotsugu Ishizu, Aoi Fujita, Yumiko Tomoe, Mikiko C Siomi

EMBO Rep. 2019 Jul; 20(7): e47708. Published online 2019 Apr 30. doi: 10.15252/embr.201947708

PMCID:: PMC6607011

Abstract Article PDF–1.6M

Select item 588715014.

RNA-Interference Pathways Display High Rates of Adaptive Protein Evolution in Multiple Invertebrates

William H. Palmer, Jarrod D. Hadfield, Darren J. Obbard

Genetics. 2018 Apr; 208(4): 1585–1599. Published online 2018 Feb 1. doi: 10.1534/genetics.117.300567

PMCID:: PMC5887150

Abstract Article PDF–1.7M

Select item 570780515.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900216.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 512686417.

Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster

Punita Juneja, Andrew Quinn, Francis M. Jiggins

BMC Genomics. 2016; 17: 981. Published online 2016 Nov 28. doi: 10.1186/s12864-016-3333-7

PMCID:: PMC5126864

Abstract Article PDF–1.1M

Select item 485396218.

A Quantitative Genomic Approach for Analysis of Fitness and Stress Related Traits in a Drosophila melanogaster Model Population

Palle Duun Rohde, Kristian Krag, Volker Loeschcke, Johannes Overgaard, Peter Sørensen, Torsten Nygaard Kristensen

Int J Genomics. 2016; 2016: 2157494. Published online 2016 Apr 19. doi: 10.1155/2016/2157494

PMCID:: PMC4853962

Abstract Article PDF–1.0M

Select item 452833019.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832920.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929