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Select item 112455471.

A type II phosphatidylinositol-4-kinase coordinates sorting of cargo polarizing by endocytic recycling

Anezia Kourkoulou, Olga Martzoukou, Reinhard Fischer, Sotiris Amillis

Commun Biol. 2024; 7: 855. Published online 2024 Jul 12. doi: 10.1038/s42003-024-06553-3

PMCID:: PMC11245547

Abstract Article PDF–2.3M

Select item 108724772.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001383.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 92860234.

Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion

Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton

Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019

PMCID:: PMC9286023

Abstract Article

Select item 92098115.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 81014876.

Arf1 directly recruits the Pik1-Frq1 PI4K complex to regulate the final stages of Golgi maturation

Carolyn M. Highland, J. Christopher Fromme

Mol Biol Cell. 2021 May 1; 32(10): 1064–1080. doi: 10.1091/mbc.E21-02-0069

PMCID:: PMC8101487

Abstract Article PDF–2.7M

Select item 75074027.

Systematic analysis of bypass suppression of essential genes

Jolanda van Leeuwen, Carles Pons, Guihong Tan, Zi Yang Wang, Jing Hou, Jochen Weile, Marinella Gebbia, Wendy Liang, Ermira Shuteriqi, Zhijian Li, Maykel Lopes, Matej Ušaj, Andreia Dos Santos Lopes, Natascha van Lieshout, Chad L Myers, Frederick P Roth, Patrick Aloy, Brenda J Andrews, Charles Boone

Mol Syst Biol. 2020 Sep; 16(9): e9828. Published online 2020 Sep 17. doi: 10.15252/msb.20209828

PMCID:: PMC7507402

Abstract Article PDF–1.9M

Select item 73071058.

Co-opted Cellular Sac1 Lipid Phosphatase and PI(4)P Phosphoinositide Are Key Host Factors during the Biogenesis of the Tombusvirus Replication Compartment

Zsuzsanna Sasvari, Wenwu Lin, Jun-Ichi Inaba, Kai Xu, Nikolay Kovalev, Peter D. Nagy

J Virol. 2020 Jun; 94(12): e01979-19. Prepublished online 2020 Apr 8. Published online 2020 Jun 1. doi: 10.1128/JVI.01979-19

PMCID:: PMC7307105

Abstract Article PDF–7.1M

Select item 64728809.

Saccharomyces cerevisiae Gle2/Rae1 is involved in septin organization, essential for cell cycle progression

Gesa Zander, Wilfried Kramer, Anika Seel, Heike Krebber

Yeast. 2017 Nov; 34(11): 459–470. Published online 2017 Sep 28. doi: 10.1002/yea.3249

PMCID:: PMC6472880

Abstract Article PDF–1.9M

Select item 592252810.

Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs

Harley O’Connor Mount, Nicole M. Revie, Robert T. Todd, Kaitlin Anstett, Cathy Collins, Michael Costanzo, Charles Boone, Nicole Robbins, Anna Selmecki, Leah E. Cowen

PLoS Genet. 2018 Apr; 14(4): e1007319. Published online 2018 Apr 27. doi: 10.1371/journal.pgen.1007319

PMCID:: PMC5922528

Abstract Article PDF–7.1M

Select item 576577211.

Budding yeast has a minimal endomembrane system

Kasey J. Day, Jason C. Casler, Benjamin S. Glick

Dev Cell. Author manuscript; available in PMC 2019 Jan 8.

Published in final edited form as: Dev Cell. 2018 Jan 8; 44(1): 56–72.e4. Published online 2018 Jan 8. doi: 10.1016/j.devcel.2017.12.014

PMCID:: PMC5765772

Abstract Article PDF–2.0M

Select item 576535912.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 566188513.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 559732414.

Direct interaction of the Golgi V-ATPase a-subunit isoform with PI(4)P drives localization of Golgi V-ATPases in yeast

Subhrajit Banerjee, Patricia M. Kane

Mol Biol Cell. 2017 Sep 15; 28(19): 2518–2530. doi: 10.1091/mbc.E17-05-0316

PMCID:: PMC5597324

Abstract Article PDF–1.2M

Select item 538002615.

Conserved role for Gga proteins in phosphatidylinositol 4-kinase localization to the trans-Golgi network

Lydia Daboussi, Giancarlo Costaguta, Razmik Ghukasyan, Gregory S. Payne

Proc Natl Acad Sci U S A. 2017 Mar 28; 114(13): 3433–3438. Published online 2017 Mar 13. doi: 10.1073/pnas.1615163114

PMCID:: PMC5380026

Abstract Article PDF–1.1M

Select item 520434816.

A novel translational control mechanism involving RNA structures within coding sequences

Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez

Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116

Correction in:: Genome Res. 2017 Apr; 27(4): 663.

PMCID:: PMC5204348

Abstract Article PDF–1.3M

Select item 485589117.

Phosphoinositide-mediated clathrin adaptor progression at the trans Golgi network

Lydia Daboussi, Giancarlo Costaguta, Gregory S. Payne

Nat Cell Biol. Author manuscript; available in PMC 2016 May 4.

Published in final edited form as: Nat Cell Biol. 2012 Mar; 14(3): 239–248. Published online 2012 Feb 19. doi: 10.1038/ncb2427

PMCID:: PMC4855891

Abstract Article PDF–2.4M

Select item 475092718.

The casein kinases Yck1p and Yck2p act in the secretory pathway, in part, by regulating the Rab exchange factor Sec2p

Danièle Stalder, Peter J. Novick

Mol Biol Cell. 2016 Feb 15; 27(4): 686–701. doi: 10.1091/mbc.E15-09-0651

PMCID:: PMC4750927

Abstract Article PDF–789K

Select item 443181019.

The 4E-BP Caf20p Mediates Both eIF4E-Dependent and Independent Repression of Translation

Lydia M. Castelli, David Talavera, Christopher J. Kershaw, Sarah S. Mohammad-Qureshi, Joseph L. Costello, William Rowe, Paul F. G. Sims, Christopher M. Grant, Simon J. Hubbard, Mark P. Ashe, Graham D. Pavitt

PLoS Genet. 2015 May; 11(5): e1005233. Published online 2015 May 14. doi: 10.1371/journal.pgen.1005233

PMCID:: PMC4431810

Abstract Article PDF–5.5M

Select item 438580720.

Role of Phosphatidylinositol Phosphate Signaling in the Regulation of the Filamentous-Growth Mitogen-Activated Protein Kinase Pathway

Hema Adhikari, Paul J. Cullen

Eukaryot Cell. 2015 Apr; 14(4): 427–440. Prepublished online 2015 Feb 27. Published online 2015 Apr 3. doi: 10.1128/EC.00013-15

PMCID:: PMC4385807

Abstract Article PDF–2.0M

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