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Items: 1 to 20 of 62

1.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
2.
HIV-1 Nef Promotes Endocytosis of Cell Surface MHC Class II Molecules via a Constitutive Pathway
Ashutosh Chaudhry, Divya Anna Verghese, Suman Ranjan Das, Shahid Jameel, Anna George, Vineeta Bal, Satyajit Mayor, Satyajit Rath
J Immunol. Author manuscript; available in PMC 2024 Sep 17.
Published in final edited form as: J Immunol. 2009 Aug 15; 183(4): 2415–2424. Published online 2009 Jul 20. doi: 10.4049/jimmunol.0804014
PMCID:
PMC7616452
AbstractArticlePDF–1.9M
3.
Analyzing the M. tuberculosis immune response by T cell receptor clustering with GLIPH2 and genome-wide antigen screening
Huang Huang, Chunlin Wang, Florian Rubelt, Thomas J. Scriba, Mark M. Davis
Nat Biotechnol. Author manuscript; available in PMC 2020 Oct 27.
Published in final edited form as: Nat Biotechnol. 2020 Oct; 38(10): 1194–1202. Published online 2020 Apr 27. doi: 10.1038/s41587-020-0505-4
PMCID:
PMC7541396
AbstractArticlePDF–2.1M
4.
HIV-1 Gag-Virus-Like Particles Induce Natural Killer Cell Immune Responses via Activation and Maturation of Dendritic Cells
Myint Oo Chang, Tomoyuki Suzuki, Hitoshi Suzuki, Hiroshi Takaku
J Innate Immun. 2012 Feb; 4(2): 187–200. Published online 2011 Jul 22. doi: 10.1159/000329226
PMCID:
PMC6741469
AbstractArticlePDF–990K
5.
HLA-DRB1 reduces the risk of type 2 diabetes mellitus by increased insulin secretion
R. C. Williams, Y. L. Muller, R. L. Hanson, W. C. Knowler, C. C. Mason, L. Bian, V. Ossowski, K. Wiedrich, Y. F. Chen, S. Marcovina, J. Hahnke, R. G. Nelson, L. J. Baier, C. Bogardus
Diabetologia. Author manuscript; available in PMC 2019 Mar 25.
Published in final edited form as: Diabetologia. 2011 Jul; 54(7): 1684–1692. Published online 2011 Apr 12. doi: 10.1007/s00125-011-2122-8
PMCID:
PMC6432927
AbstractArticlePDF–454K
6.
Enhanced detection of neoantigen-reactive T cells targeting unique and shared oncogenes for personalized cancer immunotherapy
Rami Yossef, Eric Tran, Drew C. Deniger, Alena Gros, Anna Pasetto, Maria R. Parkhurst, Jared J. Gartner, Todd D. Prickett, Gal Cafri, Paul F. Robbins, Steven A. Rosenberg
JCI Insight. 2018 Oct 4; 3(19): e122467. Published online 2018 Oct 4. doi: 10.1172/jci.insight.122467
PMCID:
PMC6237474
AbstractArticlePDF–3.4M
7.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
8.
HLA-DRB1*15:01 and HLA-DRB3*02:02 in PLA2R-Related Membranous Nephropathy
Wei-Bo Le, Jing-Song Shi, Tao Zhang, Lei Liu, Hua-Zhang Qin, ShaoShan Liang, Yuan-Wei Zhang, Cun-Xia Zheng, Song Jiang, Wei-Song Qin, Hai-Tao Zhang, Zhi-Hong Liu
J Am Soc Nephrol. 2017 May; 28(5): 1642–1650. Published online 2016 Dec 27. doi: 10.1681/ASN.2016060644
PMCID:
PMC5407724
AbstractArticle
9.
A Central Role for HLA-DR3 in Anti-Smith Antibody Responses and Glomerulonephritis in a Transgenic Mouse Model of Spontaneous Lupus
Vaidehi R. Chowdhary, Chao Dai, Ashenafi Y. Tilahun, Julie A. Hanson, Michele K. Smart, Joseph P. Grande, Govindarajan Rajagopalan, Shu-Man Fu, Chella S. David
J Immunol. Author manuscript; available in PMC 2017 Feb 6.
Published in final edited form as: J Immunol. 2015 Nov 15; 195(10): 4660–4667. Published online 2015 Oct 16. doi: 10.4049/jimmunol.1501073
PMCID:
PMC5292932
AbstractArticlePDF–2.1M
10.
HLA‐A*33‐DR3 and A*33‐DR9 haplotypes enhance the risk of type 1 diabetes in Han Chinese
Juanjuan Zhang, Liebin Zhao, Bokai Wang, Jie Gao, Li Wang, Li Li, Bin Cui, Min Hu, Jie Hong, Weiqiong Gu, Weiqing Wang, Guang Ning
J Diabetes Investig. 2016 Jul; 7(4): 514–521. Published online 2016 May 3. doi: 10.1111/jdi.12462
PMCID:
PMC4931201
AbstractArticlePDF–453K
11.
Next-Generation Sequencing Reveals That HLA-DRB3, -DRB4, and -DRB5 May Be Associated With Islet Autoantibodies and Risk for Childhood Type 1 Diabetes
Lue Ping Zhao, Shehab Alshiekh, Michael Zhao, Annelie Carlsson, Helena Elding Larsson, Gun Forsander, Sten A. Ivarsson, Johnny Ludvigsson, Ingrid Kockum, Claude Marcus, Martina Persson, Ulf Samuelsson, Eva Örtqvist, Chul-Woo Pyo, Wyatt C. Nelson, Daniel E. Geraghty, Åke Lernmark
Diabetes. 2016 Mar; 65(3): 710–718. Published online 2016 Jan 6. doi: 10.2337/db15-1115
PMCID:
PMC4764147
AbstractArticlePDF–2.0M
12.
hORFeome v3.1: A resource of human open reading frames representing over 10,000 human genes
Philippe Lamesch, Ning Li, Stuart Milstein, Changyu Fan, Tong Hao, Gabor Szabo, Zhenjun Hu, Kavitha Venkatesan, Graeme Bethel, Paul Martin, Jane Rogers, Stephanie Lawlor, Stuart McLaren, Amélie Dricot, Heather Borick, Michael E. Cusick, Jean Vandenhaute, Ian Dunham, David E. Hill, Marc Vidal
Genomics. 2007 Mar; 89(3): 307–315. doi: 10.1016/j.ygeno.2006.11.012
PMCID:
PMC4647941
AbstractArticle
13.
The BioPlex Network: A Systematic Exploration of the Human Interactome
Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2016 Jul 16.
Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043
PMCID:
PMC4617211
AbstractArticlePDF–2.2M
14.
Human Plasmacytoid Dendritic Cells Efficiently Capture HIV-1 Envelope Glycoproteins via CD4 for Antigen Presentation
Kerrie J Sandgren, Anna Smed-Sörensen, Mattias N Forsell, Martina Soldemo, William C Adams, Frank Liang, Leif Perbeck, Richard A Koup, Richard T Wyatt, Gunilla B Karlsson Hedestam, Karin Loré
J Immunol. Author manuscript; available in PMC 2015 Jun 18.
Published in final edited form as: J Immunol. 2013 Jul 1; 191(1): 60–69. Published online 2013 May 31. doi: 10.4049/jimmunol.1202489
PMCID:
PMC4471340
AbstractArticlePDF–2.9M
15.
Risk of Pediatric Celiac Disease According to HLA Haplotype and Country
Edwin Liu, Hye-Seung Lee, Carin A. Aronsson, William A. Hagopian, Sibylle Koletzko, Marian J. Rewers, George S. Eisenbarth, Polly J. Bingley, Ezio Bonifacio, Ville Simell, Daniel Agardh, for the TEDDY Study Group
N Engl J Med. Author manuscript; available in PMC 2015 Jan 3.
Published in final edited form as: N Engl J Med. 2014 Jul 3; 371(1): 42–49. doi: 10.1056/NEJMoa1313977
Correction in:
volume 371 on page 390
PMCID:
PMC4163840
AbstractArticlePDF–750K
16.
Genetic association of autoimmune hepatitis and human leucocyte antigen in German patients
Andreas Teufel, Markus Wörns, Arndt Weinmann, Catherine Centner, Anja Piendl, Ansgar W Lohse, Peter R Galle, Stephan Kanzler
World J Gastroenterol. 2006 Sep 14; 12(34): 5513–5516. Published online 2006 Sep 14. doi: 10.3748/wjg.v12.i34.5513
PMCID:
PMC4088235
AbstractArticlePDF–535K
17.
Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism
Roser Corominas, Xinping Yang, Guan Ning Lin, Shuli Kang, Yun Shen, Lila Ghamsari, Martin Broly, Maria Rodriguez, Stanley Tam, Shelly A. Wanamaker, Changyu Fan, Song Yi, Murat Tasan, Irma Lemmens, Xingyan Kuang, Nan Zhao, Dheeraj Malhotra, Jacob J. Michaelson, Vladimir Vacic, Michael A. Calderwood, Frederick P. Roth, Jan Tavernier, Steve Horvath, Kourosh Salehi-Ashtiani, Dmitry Korkin, Jonathan Sebat, David E. Hill, Tong Hao, Marc Vidal, Lilia M. Iakoucheva
Nat Commun. 2014; 5: 3650. Published online 2014 Apr 11. doi: 10.1038/ncomms4650
Correction in:
Nat Commun. 2023; 14: 569.
PMCID:
PMC3996537
AbstractArticlePDF–1.9M
18.
Major histocompatibility complex class-II molecules promote targeting of human immunodeficiency virus type 1 virions in late endosomes by enhancing internalization of nascent particles from the plasma membrane
Andrés Finzi, Mira Perlman, Marie-Claude Bourgeois-Daigneault, Jacques Thibodeau, Éric A. Cohen
Cell Microbiol. Author manuscript; available in PMC 2014 Mar 15.
Published in final edited form as: Cell Microbiol. 2013 May; 15(5): 809–822. Published online 2012 Dec 12. doi: 10.1111/cmi.12074
PMCID:
PMC3955195
AbstractArticlePDF–1.1M
19.
Fusion of Ubiquitin to HIV Gag Impairs Human Monocyte-Derived Dendritic Cell Maturation and Reduces Ability to Induce Gag T Cell Responses
Shanthi Herath, Adel Benlahrech, Timos Papagatsias, Takis Athanasopoulos, Zineb Bouzeboudjen, Catherine Hervouet, Linda Klavinskis, Andrea Meiser, Peter Kelleher, George Dickson, Steven Patterson
PLoS One. 2014; 9(2): e88327. Published online 2014 Feb 5. doi: 10.1371/journal.pone.0088327
PMCID:
PMC3914991
AbstractArticlePDF–2.6M
20.
Next Generation Sequencing Reveals the Association of DRB3*02:02 With Type 1 Diabetes
Henry A. Erlich, Ana Maria Valdes, Shana L. McDevitt, Birgitte B. Simen, Lisbeth A. Blake, Kim R. McGowan, John A. Todd, Stephen S. Rich, Janelle A. Noble, for the Type 1 Diabetes Genetics Consortium (T1DGC)
Diabetes. 2013 Jul; 62(7): 2618–2622. Published online 2013 Jun 14. doi: 10.2337/db12-1387
PMCID:
PMC3712046
AbstractArticlePDF–89K

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