PMC Links for GEO Profiles (Select 592810) - PMC

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Items: 14

Select item 92098111.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 76641222.

The Capture of a Disabled Proteasome Identifies Erg25 as a Substrate for Endoplasmic Reticulum Associated Degradation

Teresa M. Buck, Xuemei Zeng, Pamela S. Cantrell, Richard T. Cattley, Zikri Hasanbasri, Megan E. Yates, Diep Nguyen, Nathan A. Yates, Jeffrey L. Brodsky

Mol Cell Proteomics. 2020 Nov; 19(11): 1896–1909. Published online 2020 Aug 31. doi: 10.1074/mcp.RA120.002050

PMCID:: PMC7664122

Abstract Article PDF–1.2M

Select item 62913663.

The cellular economy of the Saccharomyces cerevisiae zinc proteome

Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide

Metallomics. Author manuscript; available in PMC 2019 Dec 12.

Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j

PMCID:: PMC6291366

Abstract Article PDF–3.0M

Select item 57653594.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 48698355.

One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy

Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Schütze, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner

Nat Methods. Author manuscript; available in PMC 2016 Sep 22.

Published in final edited form as: Nat Methods. 2016 Apr; 13(4): 371–378. Published online 2016 Feb 29. doi: 10.1038/nmeth.3795

PMCID:: PMC4869835

Abstract Article PDF–2.7M

Select item 40539646.

Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae

Mallory A Freeberg, Ting Han, James J Moresco, Andy Kong, Yu-Cheng Yang, Zhi John Lu, John R Yates, John K Kim

Genome Biol. 2013; 14(2): R13. Published online 2013 Feb 14. doi: 10.1186/gb-2013-14-2-r13

PMCID:: PMC4053964

Abstract Article PDF–1.7M

Select item 37913127.

A Lipid E-MAP Identifies Ubx2 as a Critical Regulator of Lipid Saturation and Lipid Bilayer Stress

Michal A. Surma, Christian Klose, Debby Peng, Michael Shales, Caroline Mrejen, Adam Stefanko, Hannes Braberg, David E. Gordon, Daniela Vorkel, Christer S. Ejsing, Robert Farese, Jr., Kai Simons, Nevan J. Krogan, Robert Ernst

Mol Cell. Author manuscript; available in PMC 2014 Aug 22.

Published in final edited form as: Mol Cell. 2013 Aug 22; 51(4): 519–530. Published online 2013 Jul 25. doi: 10.1016/j.molcel.2013.06.014

PMCID:: PMC3791312

Abstract Article PDF–1.9M

Select item 32859338.

La-motif–dependent mRNA association with Slf1 promotes copper detoxification in yeast

Luca Schenk, Dominik M. Meinel, Katja Strässer, André P. Gerber

RNA. 2012 Mar; 18(3): 449–461. doi: 10.1261/rna.028506.111

PMCID:: PMC3285933

Abstract Article PDF–812K

Select item 31976779.

Transcriptome-Wide Binding Sites for Components of the Saccharomyces cerevisiae Non-Poly(A) Termination Pathway: Nrd1, Nab3, and Sen1

Tyler J. Creamer, Miranda M. Darby, Nuttara Jamonnak, Paul Schaughency, Haiping Hao, Sarah J. Wheelan, Jeffry L. Corden

PLoS Genet. 2011 Oct; 7(10): e1002329. Published online 2011 Oct 20. doi: 10.1371/journal.pgen.1002329

PMCID:: PMC3197677

Abstract Article PDF–1.3M

Select item 312811210.

Cryptic Transcription Mediates Repression of Subtelomeric Metal Homeostasis Genes

Isabelle Toesca, Camille R. Nery, Cesar F. Fernandez, Shakir Sayani, Guillaume F. Chanfreau

PLoS Genet. 2011 Jun; 7(6): e1002163. Published online 2011 Jun 30. doi: 10.1371/journal.pgen.1002163

PMCID:: PMC3128112

Abstract Article PDF–3.2M

Select item 253746211.

Dissecting the regulation of yeast genes by the osmotin receptor

Brian R. Kupchak, Nancy Y. Villa, Lidia Kulemina, Thomas J. Lyons

Biochem Biophys Res Commun. Author manuscript; available in PMC 2009 Sep 19.

Published in final edited form as: Biochem Biophys Res Commun. 2008 Sep 19; 374(2): 210–213. Published online 2008 Jul 14. doi: 10.1016/j.bbrc.2008.07.002