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Items: 1 to 20 of 33

1.
The base excision repair process: comparison between higher and lower eukaryotes
Nagham Nafiz Hindi, Noha Elsakrmy, Dindial Ramotar
Cell Mol Life Sci. 2021 Dec; 78(24): 7943–7965. Published online 2021 Nov 3. doi: 10.1007/s00018-021-03990-9
PMCID:
PMC11071731
AbstractArticlePDF–1.2M
2.
Rapid, inexpensive, sequence-independent fluorescent labeling of phosphorothioate DNA
Matthew J. Satusky, Caitlin V. Johnson, Dorothy A. Erie
Biophys J. 2023 Apr 4; 122(7): 1211–1218. Published online 2023 Feb 14. doi: 10.1016/j.bpj.2023.02.011
PMCID:
PMC10111259
AbstractArticlePDF–1.0M
3.
DNA polymerase theta suppresses mitotic crossing over
Juan Carvajal-Garcia, K. Nicole Crown, Dale A. Ramsden, Jeff Sekelsky
PLoS Genet. 2021 Mar; 17(3): e1009267. Published online 2021 Mar 22. doi: 10.1371/journal.pgen.1009267
PMCID:
PMC8016270
AbstractArticlePDF–2.0M
4.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
5.
Editor’s Highlight: Genetic Targets of Acute Toluene Inhalation in Drosophila melanogaster
Philip J. Bushnell, William O. Ward, Tatiana V. Morozova, Wendy M. Oshiro, Mimi T. Lin, Richard S. Judson, Susan D. Hester, John M. McKee, Mark Higuchi
Toxicol Sci. 2017 Mar; 156(1): 230–239. Published online 2016 Dec 24. doi: 10.1093/toxsci/kfw243
PMCID:
PMC5837442
AbstractArticlePDF–661K
6.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
7.
Substrate preference of Gen endonucleases highlights the importance of branched structures as DNA damage repair intermediates
Stephanie P. Bellendir, Danielle J. Rognstad, Lydia P. Morris, Grzegorz Zapotoczny, William G. Walton, Matthew R. Redinbo, Dale A. Ramsden, Jeff Sekelsky, Dorothy A. Erie
Nucleic Acids Res. 2017 May 19; 45(9): 5333–5348. Published online 2017 Mar 28. doi: 10.1093/nar/gkx214
PMCID:
PMC5435919
AbstractArticlePDF–4.7M
8.
DNA Repair in Drosophila: Mutagens, Models, and Missing Genes
Jeff Sekelsky
Genetics. 2017 Feb; 205(2): 471–490. Published online 2017 Jan 31. doi: 10.1534/genetics.116.186759
PMCID:
PMC5289830
AbstractArticlePDF–891K
9.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
10.
The Adaptive Significance of Natural Genetic Variation in the DNA Damage Response of Drosophila melanogaster
Nicolas Svetec, Julie M. Cridland, Li Zhao, David J. Begun
PLoS Genet. 2016 Mar; 12(3): e1005869. Published online 2016 Mar 7. doi: 10.1371/journal.pgen.1005869
PMCID:
PMC4780809
AbstractArticlePDF–543K
11.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
12.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
13.
A Genetic Screen and Transcript Profiling Reveal a Shared Regulatory Program for Drosophila Linker Histone H1 and Chromatin Remodeler CHD1
Harsh Kavi, Xingwu Lu, Na Xu, Boris A. Bartholdy, Elena Vershilova, Arthur I. Skoultchi, Dmitry V. Fyodorov
G3 (Bethesda) 2015 Apr; 5(4): 677–687. Published online 2015 Jan 27. doi: 10.1534/g3.115.016709
PMCID:
PMC4390582
AbstractArticlePDF–1.3M
14.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
15.
Drosophila FANCM Helicase Prevents Spontaneous Mitotic Crossovers Generated by the MUS81 and SLX1 Nucleases
H. Kenny Kuo, Susan McMahan, Christopher M. Rota, Kathryn P. Kohl, Jeff Sekelsky
Genetics. 2014 Nov; 198(3): 935–945. Published online 2014 Sep 8. doi: 10.1534/genetics.114.168096
PMCID:
PMC4224181
AbstractArticlePDF–1.0M
16.
The Drosophila Werner Exonuclease Participates in an Exonuclease-Independent Response to Replication Stress
Elyse Bolterstein, Rachel Rivero, Melissa Marquez, Mitch McVey
Genetics. 2014 Jun; 197(2): 643–652. Published online 2014 Apr 7. doi: 10.1534/genetics.114.164228
PMCID:
PMC4063921
AbstractArticlePDF–1.0M
17.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
18.
The Many Landscapes of Recombination in Drosophila melanogaster
Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin
PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905
PMCID:
PMC3469467
AbstractArticlePDF–1.6M
19.
Uracil-Containing DNA in Drosophila: Stability, Stage-Specific Accumulation, and Developmental Involvement
Villő Muha, András Horváth, Angéla Békési, Mária Pukáncsik, Barbara Hodoscsek, Gábor Merényi, Gergely Róna, Júlia Batki, István Kiss, Ferenc Jankovics, Péter Vilmos, Miklós Erdélyi, Beáta G. Vértessy
PLoS Genet. 2012 Jun; 8(6): e1002738. Published online 2012 Jun 7. doi: 10.1371/journal.pgen.1002738
PMCID:
PMC3369950
AbstractArticlePDF–1.6M
20.
Three Structure-Selective Endonucleases Are Essential in the Absence of BLM Helicase in Drosophila
Sabrina L. Andersen, H. Kenny Kuo, Daniel Savukoski, Michael H. Brodsky, Jeff Sekelsky
PLoS Genet. 2011 Oct; 7(10): e1002315. Published online 2011 Oct 13. doi: 10.1371/journal.pgen.1002315
PMCID:
PMC3192830
AbstractArticlePDF–436K

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