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Links from GEO Profiles

Items: 16

1.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
2.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
3.
Dimerization-dependent Folding Underlies Assembly Control of the Clonotypic αβT Cell Receptor Chains
Matthias J. Feige, Julia Behnke, Tanja Mittag, Linda M. Hendershot
J Biol Chem. 2015 Oct 30; 290(44): 26821–26831. Published online 2015 Sep 23. doi: 10.1074/jbc.M115.689471
PMCID:
PMC4646335
AbstractArticlePDF–2.2M
4.
The BioPlex Network: A Systematic Exploration of the Human Interactome
Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2016 Jul 16.
Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043
PMCID:
PMC4617211
AbstractArticlePDF–2.2M
5.
Genome-wide association study and meta-analysis of intraocular pressure
A. Bilge Ozel, Sayoko E. Moroi, David M. Reed, Melisa Nika, Caroline M. Schmidt, Sara Akbari, Kathleen Scott, Frank Rozsa, Hemant Pawar, David C. Musch, Paul R. Lichter, Doug Gaasterland, Kari Branham, Jesse Gilbert, Sarah J. Garnai, Wei Chen, Mohammad Othman, John Heckenlively, Anand Swaroop, Gonçalo Abecasis, David S. Friedman, Don Zack, Allison Ashley-Koch, Megan Ulmer, Jae H. Kang, NEIGHBOR Consortium, Yutao Liu, Brian L. Yaspan, Jonathan Haines, R. Rand Allingham, Michael A. Hauser, Louis Pasquale, Janey Wiggs, Julia E. Richards, Jun Z. Li
Hum Genet. Author manuscript; available in PMC 2015 Jan 1.
Published in final edited form as: Hum Genet. 2014 Jan; 133(1): 41–57. Published online 2013 Sep 4. doi: 10.1007/s00439-013-1349-5
PMCID:
PMC3982323
AbstractArticlePDF–896K
6.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
7.
Mutation in the TCRα subunit constant gene (TRAC) leads to a human immunodeficiency disorder characterized by a lack of TCRαβ+ T cells
Neil V. Morgan, Sarah Goddard, Tony S. Cardno, David McDonald, Fatimah Rahman, Dawn Barge, Andrew Ciupek, Anna Straatman-Iwanowska, Shanaz Pasha, Mary Guckian, Graham Anderson, Aarnoud Huissoon, Andrew Cant, Warren P. Tate, Sophie Hambleton, Eamonn R. Maher
J Clin Invest. 2011 Feb 1; 121(2): 695–702. Published online 2011 Jan 4. doi: 10.1172/JCI41931
PMCID:
PMC3026716
AbstractArticlePDF–865K
8.
Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins
Bernd Wollscheid, Damaris Bausch-Fluck, Christine Henderson, Robert O’Brien, Miriam Bibel, Ralph Schiess, Ruedi Aebersold, Julian D Watts
Nat Biotechnol. Author manuscript; available in PMC 2010 Apr 6.
Published in final edited form as: Nat Biotechnol. 2009 Apr; 27(4): 378–386. Published online 2009 Apr 6. doi: 10.1038/nbt.1532
Correction in:
volume 27 on page 864
PMCID:
PMC2829300
AbstractArticlePDF–3.6M
9.
TRAC Variants Associate with IgA Nephropathy
Ru Li, Chao Xue, Caixia Li, Tanqi Lou, Yu Tao, Youji Li, Weijun Huang, Jun Zhang, Joseph C. K. Leung, Man F. Lam, Tim J. Vyse, Kar N. Lai, Changyou Wu, Yiming Wang
J Am Soc Nephrol. 2009 Jun; 20(6): 1359–1367. doi: 10.1681/ASN.2008080842
PMCID:
PMC2689895
AbstractArticle
10.
Structure of a human autoimmune TCR bound to a myelin basic protein self-peptide and a multiple sclerosis-associated MHC class II molecule
Yili Li, Yuping Huang, Jessica Lue, Jacqueline A Quandt, Roland Martin, Roy A Mariuzza
EMBO J. 2005 Sep 7; 24(17): 2968–2979. Published online 2005 Aug 4. doi: 10.1038/sj.emboj.7600771
PMCID:
PMC1201352
AbstractArticlePDF–579K
11.
The chromosomal location of T-cell receptor genes and a T cell rearranging gene: possible correlation with specific translocations in human T cell leukaemia.
T H Rabbitts, M P Lefranc, M A Stinson, J E Sims, J Schroder, M Steinmetz, N L Spurr, E Solomon, P N Goodfellow
EMBO J. 1985 Jun; 4(6): 1461–1465. doi: 10.1002/j.1460-2075.1985.tb03803.x
PMCID:
PMC554368
SummaryPage BrowsePDF–1.0M
12.
Human T-cell tumours containing chromosome 14 inversion or translocation with breakpoints proximal to immunoglobulin joining regions at 14q32.
L Mengle-Gaw, H F Willard, C I Smith, L Hammarström, P Fischer, P Sherrington, G Lucas, P W Thompson, R Baer, T H Rabbitts
EMBO J. 1987 Aug; 6(8): 2273–2280. doi: 10.1002/j.1460-2075.1987.tb02501.x
PMCID:
PMC553629
SummaryPage BrowsePDF–1.5M
13.
Analysis of cDNA clones specific for human T cells and the alpha and beta chains of the T-cell receptor heterodimer from a human T-cell line.
Y Yanagi, A Chan, B Chin, M Minden, T W Mak
Proc Natl Acad Sci U S A. 1985 May; 82(10): 3430–3434. doi: 10.1073/pnas.82.10.3430
PMCID:
PMC397789
SummaryPage BrowsePDF–1.4M
14.
First genomic sequence of the human T-cell receptor delta 2 gene (TRDV2).
P Dariavach, M P Lefranc
Nucleic Acids Res. 1989 Jun 26; 17(12): 4880. doi: 10.1093/nar/17.12.4880
PMCID:
PMC318045
SummaryPage BrowsePDF–92K
15.
Adapters in lymphocyte signaling
Albrecht Leo, Jürgen Wienands, Gottfried Baier, Vaclav Horejsi, Burkhart Schraven
J Clin Invest. 2002 Feb 1; 109(3): 301–309. doi: 10.1172/JCI14942
PMCID:
PMC150865
ArticlePDF–2.1M
16.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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