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Items: 1 to 20 of 32

1.
Genetic determinants of micronucleus formation in vivo
D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus
Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0
PMCID:
PMC10917660
AbstractArticlePDF–4.8M
2.
Mapping Brain Gene Coexpression in Daytime Transcriptomes Unveils Diurnal Molecular Networks and Deciphers Perturbation Gene Signatures
Nan Wang, Peter Langfelder, Matthew Stricos, Lalini Ramanathan, Jeffrey B. Richman, Raymond Vaca, Mary Plascencia, Xiaofeng Gu, Shasha Zhang, T. Katherine Tamai, Liguo Zhang, Fuying Gao, Koliane Ouk, Xiang Lu, Leonya Ivanov, Tom Vogt, Qing Richard Lu, A. Jennifer Morton, Christopher Colwell, Jeffrey S. Aaronson, Jim Rosinski, Steve Horvath, X. William Yang
Neuron. Author manuscript; available in PMC 2023 Oct 19.
Published in final edited form as: Neuron. 2022 Oct 19; 110(20): 3318–3338.e9. doi: 10.1016/j.neuron.2022.09.028
PMCID:
PMC9665885
AbstractArticlePDF–4.5M
3.
Deficiency of the bZIP transcription factors Mafg and Mafk causes misexpression of genes in distinct pathways and results in lens embryonic developmental defects
Shaili D. Patel, Deepti Anand, Hozumi Motohashi, Fumiki Katsuoka, Masayuki Yamamoto, Salil A. Lachke
Front Cell Dev Biol. 2022; 10: 981893. Published online 2022 Aug 26. doi: 10.3389/fcell.2022.981893
PMCID:
PMC9459095
AbstractArticlePDF–5.1M
4.
Peroxidasin Deficiency Re-programs Macrophages Toward Pro-fibrolysis Function and Promotes Collagen Resolution in Liver
Mozhdeh Sojoodi, Derek J. Erstad, Stephen C. Barrett, Shadi Salloum, Shijia Zhu, Tongqi Qian, Selene Colon, Eric M. Gale, Veronica Clavijo Jordan, Yongtao Wang, Shen Li, Bahar Ataeinia, Sasan Jalilifiroozinezhad, Michael Lanuti, Lawrence Zukerberg, Peter Caravan, Yujin Hoshida, Raymond T. Chung, Gautam Bhave, Georg M. Lauer, Bryan C. Fuchs, Kenneth K. Tanabe
Cell Mol Gastroenterol Hepatol. 2022; 13(5): 1483–1509. Published online 2022 Jan 28. doi: 10.1016/j.jcmgh.2022.01.015
PMCID:
PMC9043497
AbstractArticlePDF–13M
5.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
6.
Peroxidasin mediates bromination of tyrosine residues in the extracellular matrix
Boushra Bathish, Martina Paumann-Page, Louise N. Paton, Anthony J. Kettle, Christine C. Winterbourn
J Biol Chem. 2020 Sep 4; 295(36): 12697–12705. Published online 2020 Jul 16. doi: 10.1074/jbc.RA120.014504
PMCID:
PMC7476726
AbstractArticlePDF–2.1M
7.
Peroxidasin-mediated bromine enrichment of basement membranes
Cuiwen He, Wenxin Song, Thomas A. Weston, Caitlyn Tran, Ira Kurtz, Jonathan E. Zuckerman, Paul Guagliardo, Jeffrey H. Miner, Sergey V. Ivanov, Jeremy Bougoure, Billy G. Hudson, Selene Colon, Paul A. Voziyan, Gautam Bhave, Loren G. Fong, Stephen G. Young, Haibo Jiang
Proc Natl Acad Sci U S A. 2020 Jul 7; 117(27): 15827–15836. Published online 2020 Jun 22. doi: 10.1073/pnas.2007749117
PMCID:
PMC7354931
AbstractArticlePDF–3.1M
8.
Biallelic Deletion of Pxdn in Mice Leads to Anophthalmia and Severe Eye Malformation
Hyun-Kyung Kim, Kyung A Ham, Seung-Woo Lee, Hong Seok Choi, Hong-Sug Kim, Hong Kyung Kim, Hae-Sol Shin, Kyoung Yul Seo, Yejin Cho, Ki Taek Nam, In-Beom Kim, Young Ae Joe
Int J Mol Sci. 2019 Dec; 20(24): 6144. Published online 2019 Dec 5. doi: 10.3390/ijms20246144
PMCID:
PMC6941041
AbstractArticlePDF–3.2M
9.
Vascular peroxidase 1 is a novel regulator of cardiac fibrosis after myocardial infarction
Zhaoya Liu, Qian Xu, Qixin Yang, Jing Cao, Cong Wu, Huihui Peng, Xinyi Zhang, Jia Chen, Guangjie Cheng, Yueheng Wu, Ruizheng Shi, Guogang Zhang
Redox Biol. 2019 Apr; 22: 101151. Published online 2019 Feb 27. doi: 10.1016/j.redox.2019.101151
Correction in:
Redox Biol. 2021 Nov; 47: 102146.
PMCID:
PMC6402381
AbstractArticlePDF–4.6M
10.
Peroxidasin and eosinophil peroxidase, but not myeloperoxidase, contribute to renal fibrosis in the murine unilateral ureteral obstruction model
Selene Colon, Haiyan Luan, Yan Liu, Cameron Meyer, Leslie Gewin, Gautam Bhave
Am J Physiol Renal Physiol. 2019 Feb 1; 316(2): F360–F371. Published online 2018 Dec 19. doi: 10.1152/ajprenal.00291.2018
PMCID:
PMC6397377
AbstractArticle
11.
VPO1 Modulates Vascular Smooth Muscle Cell Phenotypic Switch by Activating Extracellular Signal‐regulated Kinase 1/2 (ERK 1/2) in Abdominal Aortic Aneurysms
Huihui Peng, Kai Zhang, Zhaoya Liu, Qian Xu, Baiyang You, Chan Li, Jing Cao, Honghua Zhou, Xiaohui Li, Jia Chen, Guangjie Cheng, Ruizheng Shi, Guogang Zhang
J Am Heart Assoc. 2018 Sep 4; 7(17): e010069. Published online 2018 Aug 22. doi: 10.1161/JAHA.118.010069
PMCID:
PMC6201418
AbstractArticlePDF–8.3M
12.
Peroxidasin contributes to lung host defense by direct binding and killing of gram-negative bacteria
Ruizheng Shi, Zehong Cao, Hong Li, Jochen Graw, Guogang Zhang, Victor J. Thannickal, Guangjie Cheng
PLoS Pathog. 2018 May; 14(5): e1007026. Published online 2018 May 18. doi: 10.1371/journal.ppat.1007026
PMCID:
PMC5979044
AbstractArticlePDF–23M
13.
The sulfilimine cross-link of collagen IV contributes to kidney tubular basement membrane stiffness
Gautam Bhave, Selene Colon, Nicholas Ferrell
Am J Physiol Renal Physiol. 2017 Sep 1; 313(3): F596–F602. Published online 2017 Apr 19. doi: 10.1152/ajprenal.00096.2017
PMCID:
PMC5625101
AbstractArticle
14.
Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function
Tingting Zhang, Wei Du, Andrew F. Wilson, Satoshi H. Namekawa, Paul R. Andreassen, Amom Ruhikanta Meetei, Qishen Pang
Sci Rep. 2017; 7: 45626. Published online 2017 Apr 5. doi: 10.1038/srep45626
PMCID:
PMC5381226
AbstractArticlePDF–1.4M
15.
Embryo Implantation Triggers Dynamic Spatiotemporal Expression of the Basement Membrane Toolkit During Uterine Reprogramming
Celestial R. Jones-Paris, Sayan Paria, Taloa Berg, Juan Saus, Gautam Bhave, Bibhash C. Paria, Billy G. Hudson
Matrix Biol. Author manuscript; available in PMC 2018 Jan 1.
Published in final edited form as: Matrix Biol. 2017 Jan; 57-58: 347–365. Published online 2016 Sep 10. doi: 10.1016/j.matbio.2016.09.005
PMCID:
PMC5328942
AbstractArticlePDF–3.7M
16.
Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression
Alexandra Naba, Karl R. Clauser, D. R. Mani, Steven A. Carr, Richard O. Hynes
Sci Rep. 2017; 7: 40495. Published online 2017 Jan 10. doi: 10.1038/srep40495
PMCID:
PMC5223159
AbstractArticlePDF–2.3M
17.
VPO1 mediates oxidation of LDL and formation of foam cells
Youfeng Yang, Ruizheng Shi, Zehong Cao, Guogang Zhang, Guangjie Cheng
Oncotarget. 2016 Jun 14; 7(24): 35500–35511. Published online 2016 May 5. doi: 10.18632/oncotarget.9193
PMCID:
PMC5094940
AbstractArticlePDF–2.6M
18.
Mtu1-Mediated Thiouridine Formation of Mitochondrial tRNAs Is Required for Mitochondrial Translation and Is Involved in Reversible Infantile Liver Injury
Yong Wu, Fan-Yan Wei, Layla Kawarada, Takeo Suzuki, Kimi Araki, Yoshihiro Komohara, Atsushi Fujimura, Taku Kaitsuka, Motohiro Takeya, Yuichi Oike, Tsutomu Suzuki, Kazuhito Tomizawa
PLoS Genet. 2016 Sep; 12(9): e1006355. Published online 2016 Sep 30. doi: 10.1371/journal.pgen.1006355
PMCID:
PMC5045200
AbstractArticlePDF–2.9M
19.
An examination of the regulatory mechanism of Pxdn mutation-induced eye disorders using microarray analysis
YANG YANG, YIQIAO XING, CHAOQUN LIANG, LIYA HU, FEI XU, QI MEI
Int J Mol Med. 2016 Jun; 37(6): 1449–1456. Published online 2016 Apr 20. doi: 10.3892/ijmm.2016.2572
PMCID:
PMC4866968
AbstractArticlePDF–1.3M
20.
Expression of the Immunoglobulin Superfamily Cell Adhesion Molecules in the Developing Spinal Cord and Dorsal Root Ganglion
Zirong Gu, Fumiyasu Imai, In Jung Kim, Hiroko Fujita, Kei ichi Katayama, Kensaku Mori, Yoshihiro Yoshihara, Yutaka Yoshida
PLoS One. 2015; 10(3): e0121550. Published online 2015 Mar 31. doi: 10.1371/journal.pone.0121550
PMCID:
PMC4380438
AbstractArticlePDF–36M

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