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Items: 1 to 20 of 21

1.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
2.
Histone methyltransferase DOT1L coordinates AR and MYC stability in prostate cancer
R. Vatapalli, V. Sagar, Y. Rodriguez, J. C. Zhao, K. Unno, S. Pamarthy, B. Lysy, J. Anker, H. Han, Y. A. Yoo, M. Truica, Z. R. Chalmers, F. Giles, J. Yu, D. Chakravarti, B. Carneiro, S. A. Abdulkadir
Nat Commun. 2020; 11: 4153. Published online 2020 Aug 19. doi: 10.1038/s41467-020-18013-7
PMCID:
PMC7438336
AbstractArticlePDF–2.4M
3.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
4.
Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations
Robert Fragoza, Jishnu Das, Shayne D. Wierbowski, Jin Liang, Tina N. Tran, Siqi Liang, Juan F. Beltran, Christen A. Rivera-Erick, Kaixiong Ye, Ting-Yi Wang, Li Yao, Matthew Mort, Peter D. Stenson, David N. Cooper, Xiaomu Wei, Alon Keinan, John C. Schimenti, Andrew G. Clark, Haiyuan Yu
Nat Commun. 2019; 10: 4141. Published online 2019 Sep 12. doi: 10.1038/s41467-019-11959-3
PMCID:
PMC6742646
AbstractArticlePDF–1.2M
5.
hMAGEA2 promotes progression of breast cancer by regulating Akt and Erk1/2 pathways
Song Park, Yonghun Sung, Jain Jeong, Minjee Choi, Jinhee Lee, Wookbong Kwon, Soyoung Jang, Si Jun Park, Hyeng-Soo Kim, Mee-Hyun Lee, Dong Joon Kim, Kangdong Liu, Sung-Hyun Kim, Zigang Dong, Zae Young Ryoo, Myoung Ok Kim
Oncotarget. 2017 Jun 6; 8(23): 37115–37127. Published online 2017 Mar 14. doi: 10.18632/oncotarget.16184
PMCID:
PMC5514895
AbstractArticlePDF–9.0M
6.
An inter‐species protein–protein interaction network across vast evolutionary distance
Quan Zhong, Samuel J Pevzner, Tong Hao, Yang Wang, Roberto Mosca, Jörg Menche, Mikko Taipale, Murat Taşan, Changyu Fan, Xinping Yang, Patrick Haley, Ryan R Murray, Flora Mer, Fana Gebreab, Stanley Tam, Andrew MacWilliams, Amélie Dricot, Patrick Reichert, Balaji Santhanam, Lila Ghamsari, Michael A Calderwood, Thomas Rolland, Benoit Charloteaux, Susan Lindquist, Albert‐László Barabási, David E Hill, Patrick Aloy, Michael E Cusick, Yu Xia, Frederick P Roth, Marc Vidal
Mol Syst Biol. 2016 Apr; 12(4): 865. Published online 2016 Apr 23. doi: 10.15252/msb.20156484
PMCID:
PMC4848758
AbstractArticlePDF–2.1M
7.
Human MageB2 Protein Expression Enhances E2F Transcriptional Activity, Cell Proliferation, and Resistance to Ribotoxic Stress
Leticia Y. Peche, María F. Ladelfa, María F. Toledo, Miguel Mano, Julieta E. Laiseca, Claudio Schneider, Martín Monte
J Biol Chem. 2015 Dec 4; 290(49): 29652–29662. Published online 2015 Oct 14. doi: 10.1074/jbc.M115.671982
PMCID:
PMC4705963
AbstractArticlePDF–1.8M
8.
MAGE-RING Protein Complexes Comprise a Family of E3 Ubiquitin Ligases
Jennifer M. Doyle, Jinlan Gao, Jiawei Wang, Maojun Yang, Patrick Ryan Potts
Mol Cell. Author manuscript; available in PMC 2015 Jul 21.
Published in final edited form as: Mol Cell. 2010 Sep 24; 39(6): 963–974. doi: 10.1016/j.molcel.2010.08.029
PMCID:
PMC4509788
AbstractArticlePDF–1.3M
9.
MAGE-A Cancer/Testis Antigens Inhibit MDM2 Ubiquitylation Function and Promote Increased Levels of MDM4
Lynnette Marcar, Bianca Ihrig, John Hourihan, Susan E. Bray, Philip R. Quinlan, Lee B. Jordan, Alastair M. Thompson, Ted R. Hupp, David W. Meek
PLoS One. 2015; 10(5): e0127713. Published online 2015 May 22. doi: 10.1371/journal.pone.0127713
PMCID:
PMC4441487
AbstractArticlePDF–3.6M
10.
Identification of MAGEA antigens as causal players in the development of tamoxifen-resistant breast cancer
P-P Wong, C C Yeoh, A S Ahmad, C Chelala, C Gillett, V Speirs, J L Jones, H C Hurst
Oncogene. 2014 Sep 11; 33(37): 4579–4588. Published online 2014 Mar 24. doi: 10.1038/onc.2014.45
PMCID:
PMC4162461
AbstractArticlePDF–3.0M
11.
Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism
Roser Corominas, Xinping Yang, Guan Ning Lin, Shuli Kang, Yun Shen, Lila Ghamsari, Martin Broly, Maria Rodriguez, Stanley Tam, Shelly A. Wanamaker, Changyu Fan, Song Yi, Murat Tasan, Irma Lemmens, Xingyan Kuang, Nan Zhao, Dheeraj Malhotra, Jacob J. Michaelson, Vladimir Vacic, Michael A. Calderwood, Frederick P. Roth, Jan Tavernier, Steve Horvath, Kourosh Salehi-Ashtiani, Dmitry Korkin, Jonathan Sebat, David E. Hill, Tong Hao, Marc Vidal, Lilia M. Iakoucheva
Nat Commun. 2014; 5: 3650. Published online 2014 Apr 11. doi: 10.1038/ncomms4650
Correction in:
Nat Commun. 2023; 14: 569.
PMCID:
PMC3996537
AbstractArticlePDF–1.9M
12.
MAGE A1-A6 RT-PCR and MAGE A3 and p16 methylation analysis in induced sputum from patients with lung cancer and non-malignant lung diseases
KYEONG-CHEOL SHIN, KWAN-HO LEE, CHAE-HUN LEE, IM-HEE SHIN, HUN-SUK SUH, CHANG-HO JEON
Oncol Rep. 2012 Apr; 27(4): 911–916. Published online 2011 Nov 29. doi: 10.3892/or.2011.1566
PMCID:
PMC3583547
AbstractArticlePDF–350K
13.
MageA2 restrains cellular senescence by targeting the function of PMLIV/p53 axis at the PML-NBs
L Y Peche, M Scolz, M F Ladelfa, M Monte, C Schneider
Cell Death Differ. 2012 Jun; 19(6): 926–936. Published online 2011 Nov 25. doi: 10.1038/cdd.2011.173
PMCID:
PMC3354046
AbstractArticlePDF–789K
14.
The Role of MAGEA2 in Head and Neck Cancer
Chad A. Glazer, Ian M. Smith, Sheetal Bhan, Wenyue Sun, Steven S. Chang, Kavita M. Pattani, William Westra, Zubair Khan, Joseph A. Califano
Arch Otolaryngol Head Neck Surg. Author manuscript; available in PMC 2012 Mar 21.
Published in final edited form as: Arch Otolaryngol Head Neck Surg. 2011 Mar; 137(3): 286–293. doi: 10.1001/archoto.2011.2
PMCID:
PMC3309612
AbstractArticlePDF–1.2M
15.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
16.
Human gene MAGE-3 codes for an antigen recognized on a melanoma by autologous cytolytic T lymphocytes
J Exp Med. 1994 Mar 1; 179(3): 921–930. doi: 10.1084/jem.179.3.921
PMCID:
PMC2191409
SummaryPDF–902K
17.
MAGE-A tumor antigens target p53 transactivation function through histone deacetylase recruitment and confer resistance to chemotherapeutic agents
Martin Monte, Marta Simonatto, Leticia Y. Peche, Debora R. Bublik, Stefania Gobessi, Marco A. Pierotti, Monica Rodolfo, Claudio Schneider
Proc Natl Acad Sci U S A. 2006 Jul 25; 103(30): 11160–11165. Published online 2006 Jul 17. doi: 10.1073/pnas.0510834103
PMCID:
PMC1544058
AbstractArticlePDF–1.3M
18.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
19.
Identification and Characterization of the Potential Promoter Regions of 1031 Kinds of Human Genes
Yutaka Suzuki, Tatsuhiko Tsunoda, Jun Sese, Hirotoshi Taira, Junko Mizushima-Sugano, Hiroko Hata, Toshio Ota, Takao Isogai, Toshihiro Tanaka, Yusuke Nakamura, Akira Suyama, Yoshiyuki Sakaki, Shinichi Morishita, Kousaku Okubo, Sumio Sugano
Genome Res. 2001 May; 11(5): 677–684. doi: 10.1101/gr.164001
PMCID:
PMC311086
AbstractArticlePDF–581K
20.
Comparative Genome Sequence Analysis of the Bpa/Str Region in Mouse and Man
A.-M. Mallon, M. Platzer, R. Bate, G. Gloeckner, M.R.M. Botcherby, G. Nordsiek, M.A. Strivens, P. Kioschis, A. Dangel, D. Cunningham, R.N.A. Straw, P. Weston, M. Gilbert, S. Fernando, K. Goodall, G. Hunter, J.S. Greystrong, D. Clarke, C. Kimberley, M. Goerdes, K. Blechschmidt, A. Rump, B. Hinzmann, C.R. Mundy, W. Miller, A. Poustka, G.E. Herman, M. Rhodes, P. Denny, A. Rosenthal, S.D.M. Brown
Genome Res. 2000 Jun; 10(6): 758–775. doi: 10.1101/gr.10.6.758
PMCID:
PMC310879
AbstractArticlePDF–3.8M

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