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Select item 108029521.

Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly

Marcos Schaan Profes, Araven Tiroumalechetty, Neel Patel, Stephanie S. Lauar, Simone Sidoli, Peri T. Kurshan

PLoS Biol. 2024 Jan; 22(1): e3002466. Published online 2024 Jan 22. doi: 10.1371/journal.pbio.3002466

PMCID:: PMC10802952

Abstract Article PDF–2.7M

Select item 95700272.

Axenic Culture of Caenorhabditis elegans Alters Lysosomal/Proteasomal Balance and Increases Neuropeptide Expression

Huaihan Cai, Ping Wu, Lieselot Vandemeulebroucke, Ineke Dhondt, Madina Rasulova, Andy Vierstraete, Bart P. Braeckman

Int J Mol Sci. 2022 Oct; 23(19): 11517. Published online 2022 Sep 29. doi: 10.3390/ijms231911517

PMCID:: PMC9570027

Abstract Article PDF–6.2M

Select item 83311833.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 79951764.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 66850745.

Ubiquitination is required for the initial removal of paternal organelles in C. elegans

Paola Molina, Yunki Lim, Lynn Boyd

Dev Biol. Author manuscript; available in PMC 2020 Sep 15.

Published in final edited form as: Dev Biol. 2019 Sep 15; 453(2): 168–179. Published online 2019 May 30. doi: 10.1016/j.ydbio.2019.05.015

PMCID:: PMC6685074

Abstract Article PDF–2.0M

Select item 62881506.

Regulation of germ cell development by ARI1 family ubiquitin ligases in C. elegans

Julian A. Poush, Nicolas A. Blouin, Kristin R. Di Bona, Vladimir Lažetić, David S. Fay

Sci Rep. 2018; 8: 17737. Published online 2018 Dec 10. doi: 10.1038/s41598-018-35691-y

PMCID:: PMC6288150

Abstract Article PDF–4.3M

Select item 62165907.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 55590308.

Two functionally distinct E2/E3 pairs coordinate sequential ubiquitination of a common substrate in Caenorhabditis elegans development

Katja K. Dove, Hilary A. Kemp, Kristin R. Di Bona, Katherine H. Reiter, Luke J. Milburn, David Camacho, David S. Fay, Dana L. Miller, Rachel E. Klevit

Proc Natl Acad Sci U S A. 2017 Aug 8; 114(32): E6576–E6584. Published online 2017 Jul 24. doi: 10.1073/pnas.1705060114

PMCID:: PMC5559030

Abstract Article PDF–1.3M

Select item 53958119.

Stress induced nuclear granules form in response to accumulation of misfolded proteins in Caenorhabditis elegans

Katherine M. Sampuda, Mason Riley, Lynn Boyd

BMC Cell Biol. 2017; 18: 18. Published online 2017 Apr 19. doi: 10.1186/s12860-017-0136-x

PMCID:: PMC5395811

Abstract Article PDF–8.1M

Select item 478159710.

Ubiquitin-mediated pathways in C. elegans.

Edward T Kipreos

WormBook. 2005 : 1–24. Published online 2005 Dec 1. doi: 10.1895/wormbook.1.36.1

PMCID:: PMC4781597

Abstract Article

Select item 478102211.

The C. elegans pharynx: a model for organogenesis.

Susan E Mango

WormBook. 2007 : 1–26. Published online 2007 Jan 22. doi: 10.1895/wormbook.1.129.1

PMCID:: PMC4781022

Abstract Article

Select item 461410712.

Fitting WWP-1 in the dietary restriction network

Andrea C Carrano, Tony Hunter

Cell Cycle. 2015 May 15; 14(10): 1485–1486. Published online 2015 May 5. doi: 10.1080/15384101.2015.1032642

PMCID:: PMC4614107

Article PDF–112K

Select item 387218613.

Implicating SCF Complexes in Organogenesis in Caenorhabditis elegans

Stanley R. G. Polley, Aleksandra Kuzmanov, Jujiao Kuang, Jonathan Karpel, Vladimir Lažetić, Evguenia I. Karina, Bethany L. Veo, David S. Fay

Genetics. 2014 Jan; 196(1): 211–223. Published online 2013 Nov 5. doi: 10.1534/genetics.113.158485

PMCID:: PMC3872186

Abstract Article PDF–2.5M

Select item 338997814.

A Regulatory Module Controlling Pharyngeal Development and Function in Caenorhabditis elegans

David S. Fay, Stanley R. G. Polley, Jujiao Kuang, Aleksandra Kuzmanov, James W. Hazel, Kumaran Mani, Bethany L. Veo, John Yochem

Genetics. 2012 Jul; 191(3): 827–843. doi: 10.1534/genetics.112.140814

PMCID:: PMC3389978

Abstract Article PDF–1.9M

Select item 310207715.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 305792316.

Empirically-controlled mapping of the Caenorhabditis elegans protein-protein interactome network

Nicolas Simonis, Jean-François Rual, Anne-Ruxandra Carvunis, Murat Tasan, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Julie M Sahalie, Kavitha Venkatesan, Fana Gebreab, Sebiha Cevik, Niels Klitgord, Changyu Fan, Pascal Braun, Ning Li, Nono Ayivi-Guedehoussou, Elizabeth Dann, Nicolas Bertin, David Szeto, Amélie Dricot, Muhammed A Yildirim, Chenwei Lin, Anne-Sophie de Smet, Huey-Ling Kao, Christophe Simon, Alex Smolyar, Jin Sook Ahn, Muneesh Tewari, Mike Boxem, Stuart Milstein, Haiyuan Yu, Matija Dreze, Jean Vandenhaute, Kristin C Gunsalus, Michael E Cusick, David E Hill, Jan Tavernier, Frederick P Roth, Marc Vidal

Nat Methods. Author manuscript; available in PMC 2011 Mar 15.

Published in final edited form as: Nat Methods. 2009 Jan; 6(1): 47–54. doi: 10.1038/nmeth.1279