PMC Links for GEO Profiles (Select 61610001) - PMC

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 65956034.

The effect of AP-2δ on transcription of the Prestin gene in HEI-OC1 cells upon oxidative stress

Xuan Luo, Yun Xia, Xu-Dong Li, Jun-Yi Wang

Cell Mol Biol Lett. 2019; 24: 45. Published online 2019 Jun 26. doi: 10.1186/s11658-019-0170-0

PMCID:: PMC6595603

Abstract Article PDF–1.4M

Select item 63298315.

Single-cell transcriptomic analysis of mouse neocortical development

Lipin Loo, Jeremy M. Simon, Lei Xing, Eric S. McCoy, Jesse K. Niehaus, Jiami Guo, E. S. Anton, Mark J. Zylka

Nat Commun. 2019; 10: 134. Published online 2019 Jan 11. doi: 10.1038/s41467-018-08079-9

PMCID:: PMC6329831

Abstract Article PDF–3.6M

Select item 58218646.

AP-2ε Expression in Developing Retina: Contributing to the Molecular Diversity of Amacrine Cells

Saket Jain, Darryl D. Glubrecht, Devon R. Germain, Markus Moser, Roseline Godbout

Sci Rep. 2018; 8: 3386. Published online 2018 Feb 21. doi: 10.1038/s41598-018-21822-y

PMCID:: PMC5821864

Abstract Article PDF–2.8M

Select item 48932877.

Loss of AP-2delta reduces retinal ganglion cell numbers and axonal projections to the superior colliculus

Xiaodong Li, Frédéric Gaillard, Elizabeth A. Monckton, Darryl D. Glubrecht, Amit R. L. Persad, Markus Moser, Yves Sauvé, Roseline Godbout

Mol Brain. 2016; 9: 62. Published online 2016 Jun 4. doi: 10.1186/s13041-016-0244-0

PMCID:: PMC4893287

Abstract Article PDF–5.3M

Select item 47808218.

Polo-Like Kinase 3 Appears Dispensable for Normal Retinal Development Despite Robust Embryonic Expression

Jillian J. Goetz, Lauren A. Laboissonniere, Andrea K. Wester, Madison R. Lynch, Jeffrey M. Trimarchi

PLoS One. 2016; 11(3): e0150878. Published online 2016 Mar 7. doi: 10.1371/journal.pone.0150878

PMCID:: PMC4780821

Abstract Article PDF–30M

Select item 46418199.

Gbx2 is essential for maintaining thalamic neuron identity and repressing habenular characters in the developing thalamus

Mallika Chatterjee, Qiuxia Guo, James Y.H. Li

Dev Biol. Author manuscript; available in PMC 2016 Nov 1.

Published in final edited form as: Dev Biol. 2015 Nov 1; 407(1): 26–39. Published online 2015 Aug 20. doi: 10.1016/j.ydbio.2015.08.010

PMCID:: PMC4641819

Abstract Article PDF–2.8M

Select item 431955910.

A high resolution spatiotemporal atlas of gene expression of the developing mouse brain

Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones

Neuron. Author manuscript; available in PMC 2015 Jul 16.

Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033

PMCID:: PMC4319559

Abstract Article PDF–3.0M

Select item 357241011.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 317805912.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 315349313.

AP-2δ Is a Crucial Transcriptional Regulator of the Posterior Midbrain

Katrin Hesse, Kristina Vaupel, Simone Kurt, Reinhard Buettner, Jutta Kirfel, Markus Moser

PLoS One. 2011; 6(8): e23483. Published online 2011 Aug 9. doi: 10.1371/journal.pone.0023483

PMCID:: PMC3153493

Abstract Article PDF–2.2M

Select item 311015114.

A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58

Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara

Dev Cell. Author manuscript; available in PMC 2011 Jun 7.

Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011

PMCID:: PMC3110151

Abstract Article PDF–2.0M

Select item 302253415.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 291025116.

Brn3a regulates the transition from neurogenesis to terminal differentiation and represses non-neural gene expression in the trigeminal ganglion

Jason Lanier, Iain M. Dykes, Stephanie Nissen, S. Raisa Eng, Eric E. Turner

Dev Dyn. Author manuscript; available in PMC 2010 Jul 27.

Published in final edited form as: Dev Dyn. 2009 Dec; 238(12): 3065–3079. doi: 10.1002/dvdy.22145

PMCID:: PMC2910251

Abstract Article PDF–5.5M

Select item 283626717.

An atlas of combinatorial transcriptional regulation in mouse and man

The FANTOM consortium and RIKEN Omics Science Center

Cell. Author manuscript; available in PMC 2011 Mar 5.

Published in final edited form as: Cell. 2010 Mar 5; 140(5): 744–752. doi: 10.1016/j.cell.2010.01.044

Correction in:: volume 141 on page 369

PMCID:: PMC2836267

Abstract Article PDF–2.2M

Select item 279517018.

Fgfr3 Is a Transcriptional Target of Ap2δ and Ash2l-Containing Histone Methyltransferase Complexes

Cheryl C. Tan, Martin J. Walsh, Bruce D. Gelb

PLoS One. 2009; 4(12): e8535. Published online 2009 Dec 31. doi: 10.1371/journal.pone.0008535

PMCID:: PMC2795170

Abstract Article PDF–611K

Select item 239670819.

Transcription factor Ap2δ associates with Ash2l and ALR, a trithorax family histone methyltransferase, to activate Hoxc8 transcription

Cheryl C. Tan, K. V. Sindhu, SiDe Li, Hitomi Nishio, Jason Z. Stoller, Kimihiko Oishi, Sahitya Puttreddy, Tamara J. Lee, Jonathan A. Epstein, Martin J. Walsh, Bruce D. Gelb

Proc Natl Acad Sci U S A. 2008 May 27; 105(21): 7472–7477. Published online 2008 May 21. doi: 10.1073/pnas.0711896105

PMCID:: PMC2396708

Abstract Article PDF–1021K

Select item 216905420.

Conditional Deletion of Activating Protein 2α (AP-2α) in the Developing Retina Demonstrates Non-Cell-Autonomous Roles for AP-2α in Optic Cup Development

Erin A. Bassett, Giuseppe F. Pontoriero, Weiguo Feng, Till Marquardt, M. Elizabeth Fini, Trevor Williams, Judith A. West-Mays

Mol Cell Biol. 2007 Nov; 27(21): 7497–7510. Published online 2007 Aug 27. doi: 10.1128/MCB.00687-07

PMCID:: PMC2169054

Abstract Article PDF–1.8M

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