PMC Links for GEO Profiles (Select 617445) - PMC

Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai

Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108

PMCID:: PMC10551700

Abstract Article PDF–3.7M

Select item 93392934.

Complex mutation profiles in mismatch repair and ribonucleotide reductase mutants reveal novel repair substrate specificity of MutS homolog (MSH) complexes

Natalie A Lamb, Jonathan E Bard, Raphael Loll-Krippleber, Grant W Brown, Jennifer A Surtees

Genetics. 2022 Aug; 221(4): iyac092. Published online 2022 Jun 10. doi: 10.1093/genetics/iyac092

PMCID:: PMC9339293

Abstract Article PDF–7.9M

Select item 92098115.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 83419796.

Cdc4 phospho-degrons allow differential regulation of Ame1^CENP-U protein stability across the cell cycle

Miriam Böhm, Kerstin Killinger, Alexander Dudziak, Pradeep Pant, Karolin Jänen, Simone Hohoff, Karl Mechtler, Mihkel Örd, Mart Loog, Elsa Sanchez-Garcia, Stefan Westermann

eLife. 2021; 10: e67390. Published online 2021 Jul 26. doi: 10.7554/eLife.67390

PMCID:: PMC8341979

Abstract Article PDF–5.2M

Select item 81787547.

Ctf3/CENP-I provides a docking site for the desumoylase Ulp2 at the kinetochore

Yun Quan, Stephen M. Hinshaw, Pang-Che Wang, Stephen C. Harrison, Huilin Zhou

J Cell Biol. 2021 Aug 2; 220(8): e202012149. Published online 2021 Jun 3. doi: 10.1083/jcb.202012149

PMCID:: PMC8178754

Abstract Article PDF–3.9M

Select item 77187518.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 73864339.

Dosage suppression genetic interaction networks enhance functional wiring diagrams of the cell

Leslie Magtanong, Cheuk Hei Ho, Sarah L Barker, Wei Jiao, Anastasia Baryshnikova, Sondra Bahr, Andrew M Smith, Lawrence E Heisler, John S Choy, Elena Kuzmin, Kerry Andrusiak, Anna Kobylianski, Zhijian Li, Michael Costanzo, Munira A Basrai, Guri Giaever, Corey Nislow, Brenda Andrewa, Charles Boone

Nat Biotechnol. Author manuscript; available in PMC 2020 Jul 28.

Published in final edited form as: Nat Biotechnol. 2011 May 15; 29(6): 505–511. Published online 2011 May 15. doi: 10.1038/nbt.1855

PMCID:: PMC7386433

Abstract Article PDF–1.0M

Select item 660580110.

The stoichiometry of the outer kinetochore is modulated by microtubule-proximal regulatory factors

Karthik Dhatchinamoorthy, Jay R. Unruh, Jeffrey J. Lange, Michaella Levy, Brian D. Slaughter, Jennifer L. Gerton

J Cell Biol. 2019 Jul 1; 218(7): 2124–2135. Published online 2019 May 22. doi: 10.1083/jcb.201810070

PMCID:: PMC6605801

Abstract Article PDF–2.6M

Select item 654639511.

The COMA complex interacts with Cse4 and positions Sli15/Ipl1 at the budding yeast inner kinetochore

Josef Fischböck-Halwachs, Sylvia Singh, Mia Potocnjak, Götz Hagemann, Victor Solis-Mezarino, Stephan Woike, Medini Ghodgaonkar-Steger, Florian Weissmann, Laura D Gallego, Julie Rojas, Jessica Andreani, Alwin Köhler, Franz Herzog

eLife. 2019; 8: e42879. Published online 2019 May 21. doi: 10.7554/eLife.42879

PMCID:: PMC6546395

Abstract Article PDF–5.9M

Select item 642089112.

Gene overexpression screen for chromosome instability in yeast primarily identifies cell cycle progression genes

Hanna Tutaj, Elzbieta Pogoda, Katarzyna Tomala, Ryszard Korona

Curr Genet. 2019; 65(2): 483–492. Published online 2018 Sep 22. doi: 10.1007/s00294-018-0885-x

Correction in:: Curr Genet. 2019; 65(2): 493.

PMCID:: PMC6420891

Abstract Article PDF–995K

Select item 592252813.

Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs

Harley O’Connor Mount, Nicole M. Revie, Robert T. Todd, Kaitlin Anstett, Cathy Collins, Michael Costanzo, Charles Boone, Nicole Robbins, Anna Selmecki, Leah E. Cowen

PLoS Genet. 2018 Apr; 14(4): e1007319. Published online 2018 Apr 27. doi: 10.1371/journal.pgen.1007319

PMCID:: PMC5922528

Abstract Article PDF–7.1M

Select item 585648314.

Structure of the MIND Complex Defines a Regulatory Focus for Yeast Kinetochore Assembly

Yoana N. Dimitrova, Simon Jenni, Roberto Valverde, Yadana Khin, Stephen C. Harrison

Cell. Author manuscript; available in PMC 2018 Mar 16.

Published in final edited form as: Cell. 2016 Nov 3; 167(4): 1014–1027.e12. Published online 2016 Oct 27. doi: 10.1016/j.cell.2016.10.011

PMCID:: PMC5856483

Abstract Article PDF–2.8M

Select item 576535915.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 567489316.

Structural plasticity of the living kinetochore

Karthik Dhatchinamoorthy, Manjunatha Shivaraju, Jeffrey J. Lange, Boris Rubinstein, Jay R. Unruh, Brian D. Slaughter, Jennifer L. Gerton

J Cell Biol. 2017 Nov 6; 216(11): 3551–3570. doi: 10.1083/jcb.201703152

PMCID:: PMC5674893

Abstract Article PDF–3.7M

Select item 566188517.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 560025418.

The Genetic Landscape of a Cell

Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Sep 15.

Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823

PMCID:: PMC5600254

Abstract Article PDF–2.4M

Select item 489295819.

A TOG Protein Confers Tension Sensitivity to Kinetochore-Microtubule Attachments

Matthew P. Miller, Charles L. Asbury, Sue Biggins

Cell. Author manuscript; available in PMC 2017 Jun 2.

Published in final edited form as: Cell. 2016 Jun 2; 165(6): 1428–1439. Published online 2016 May 5. doi: 10.1016/j.cell.2016.04.030

PMCID:: PMC4892958

Abstract Article PDF–1.3M

Select item 461603920.

Integrated multi-omics analyses reveal the pleiotropic nature of the control of gene expression by Puf3p

Christopher J. Kershaw, Joseph L. Costello, David Talavera, William Rowe, Lydia M. Castelli, Paul F. G. Sims, Christopher M. Grant, Mark P. Ashe, Simon J. Hubbard, Graham D. Pavitt

Sci Rep. 2015; 5: 15518. Published online 2015 Oct 23. doi: 10.1038/srep15518

PMCID:: PMC4616039

Abstract Article PDF–2.2M

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