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Items: 20

1.
The Nudix hydrolase superfamily
A. G. McLennan
Cell Mol Life Sci. 2006 Jan; 63(2): 123–143. Published online 2005 Dec 27. doi: 10.1007/s00018-005-5386-7
PMCID:
PMC11136074
AbstractArticlePDF–173K
2.
Degradation of the Escherichia coli Essential Proteins DapB and Dxr Results in Oxidative Stress, which Contributes to Lethality through Incomplete Base Excision Repair
Charley C. Gruber, Vignesh M. P. Babu, Kamren Livingston, Heer Joisher, Graham C. Walker
mBio. 2022 Jan-Feb; 13(1): e03756-21. Published online 2022 Feb 8. doi: 10.1128/mbio.03756-21
PMCID:
PMC8822343
AbstractArticlePDF–4.1M
3.
Removal of 8-oxo-GTP by MutT hydrolase is not a major contributor to transcriptional fidelity
Alasdair J.E. Gordon, Dominik Satory, Mengyu Wang, Jennifer A. Halliday, Ido Golding, Christophe Herman
Nucleic Acids Res. 2014 Oct 29; 42(19): 12015–12026. Published online 2014 Oct 7. doi: 10.1093/nar/gku912
PMCID:
PMC4231768
AbstractArticlePDF–2.3M
4.
The binary protein-protein interaction landscape of Escherichia coli
Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz
Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.
Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831
PMCID:
PMC4123855
AbstractArticlePDF–1.1M
5.
A continuous fluorescence assay for the characterization of Nudix hydrolases
Anting Xu, Anna M. Desai, Steven E. Brenner, Jack F. Kirsch
Anal Biochem. 2013 Jun 15; 437(2): 178–184. doi: 10.1016/j.ab.2013.02.023
PMCID:
PMC3744803
AbstractArticlePDF–685K
6.
Mutation rate dynamics in a bacterial population reflect tension between adaptation and genetic load
Sébastien Wielgoss, Jeffrey E. Barrick, Olivier Tenaillon, Michael J. Wiser, W. James Dittmar, Stéphane Cruveiller, Béatrice Chane-Woon-Ming, Claudine Médigue, Richard E. Lenski, Dominique Schneider
Proc Natl Acad Sci U S A. 2013 Jan 2; 110(1): 222–227. Published online 2012 Dec 17. doi: 10.1073/pnas.1219574110
PMCID:
PMC3538217
AbstractArticlePDF–378K
7.
Structural and Dynamic Features of the MutT Protein in the Recognition of Nucleotides with the Mutagenic 8-Oxoguanine Base
Teruya Nakamura, Sachiko Meshitsuka, Seiju Kitagawa, Nanase Abe, Junichi Yamada, Tetsuya Ishino, Hiroaki Nakano, Teruhisa Tsuzuki, Takefumi Doi, Yuji Kobayashi, Satoshi Fujii, Mutsuo Sekiguchi, Yuriko Yamagata
J Biol Chem. 2010 Jan 1; 285(1): 444–452. Published online 2009 Oct 28. doi: 10.1074/jbc.M109.066373
PMCID:
PMC2804192
AbstractArticlePDF–2.2M
8.
The mutT Defect Does Not Elevate Chromosomal Fragmentation in Escherichia coli Because of the Surprisingly Low Levels of MutM/MutY-Recognized DNA Modifications
Ella Rotman, Andrei Kuzminov
J Bacteriol. 2007 Oct; 189(19): 6976–6988. Published online 2007 Jul 6. doi: 10.1128/JB.00776-07
PMCID:
PMC2045204
AbstractArticlePDF–564K
9.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
10.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
11.
A novel mechanism for preventing mutations caused by oxidation of guanine nucleotides
Toru Ishibashi, Hiroshi Hayakawa, Mutsuo Sekiguchi
EMBO Rep. 2003 May; 4(5): 479–483. Published online 2003 Apr 25. doi: 10.1038/sj.embor.embor838
PMCID:
PMC1319193
AbstractArticlePDF–110K
12.
Selection for High Mutation Rates in Chemostats
Edward C. Cox, Thomas C. Gibson
Genetics. 1974 Jun; 77(2): 169–184. doi: 10.1093/genetics/77.2.169
PMCID:
PMC1213122
SummaryPDF–947K
13.
Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region.
T Yura, H Mori, H Nagai, T Nagata, A Ishihama, N Fujita, K Isono, K Mizobuchi, A Nakata
Nucleic Acids Res. 1992 Jul 11; 20(13): 3305–3308. doi: 10.1093/nar/20.13.3305
PMCID:
PMC312481
SummaryPage BrowsePDF–957K
14.
Systematic sequencing of the Escherichia coli genome: analysis of the 2.4-4.1 min (110,917-193,643 bp) region.
N Fujita, H Mori, T Yura, A Ishihama
Nucleic Acids Res. 1994 May 11; 22(9): 1637–1639. doi: 10.1093/nar/22.9.1637
PMCID:
PMC308041
SummaryPage BrowsePDF–500K
15.
Selection of a Mutant of Escherichia coli Which Has High Mutation Rates
Robert B. Helling
J Bacteriol. 1968 Oct; 96(4): 975–980. doi: 10.1128/jb.96.4.975-980.1968
PMCID:
PMC252407
SummaryPage BrowsePDF–894K
16.
Mutator Gene of Escherichia coli B
Eli C. Siegel, Vernon Bryson
J Bacteriol. 1967 Jul; 94(1): 38–47. doi: 10.1128/jb.94.1.38-47.1967
PMCID:
PMC251868
SummaryPage BrowsePDF–1.3M
17.
Nucleotide sequence of the secA gene and secA(Ts) mutations preventing protein export in Escherichia coli.
M G Schmidt, E E Rollo, J Grodberg, D B Oliver
J Bacteriol. 1988 Aug; 170(8): 3404–3414. doi: 10.1128/jb.170.8.3404-3414.1988
PMCID:
PMC211308
SummaryPage BrowsePDF–2.0M
18.
Regulation of Escherichia coli secA mRNA translation by a secretion-responsive element.
M G Schmidt, K M Dolan, D B Oliver
J Bacteriol. 1991 Oct; 173(20): 6605–6611. doi: 10.1128/jb.173.20.6605-6611.1991
PMCID:
PMC208998
SummaryPage BrowsePDF–1.6M
19.
Activity of the Escherichia coli mutT mutator allele in an anaerobic environment.
R G Fowler, J A Erickson, R J Isbell
J Bacteriol. 1994 Dec; 176(24): 7727–7729. doi: 10.1128/jb.176.24.7727-7729.1994
PMCID:
PMC197232
SummaryPage BrowsePDF–538K
20.
Functional significance of conserved residues in the phosphohydrolase module of Escherichia coli MutT protein
Hidetoshi Shimokawa, Yoshimitsu Fujii, Masato Furuichi, Mutsuo Sekiguchi, Yusaku Nakabeppu
Nucleic Acids Res. 2000 Sep 1; 28(17): 3240–3249. doi: 10.1093/nar/28.17.3240
PMCID:
PMC110708
AbstractArticlePDF–527K

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