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Items: 1 to 20 of 28

1.
Structural biology of membrane-intrinsic β-barrel enzymes: Sentinels of the bacterial outer membrane
Russell E. Bishop
Biochim Biophys Acta. Author manuscript; available in PMC 2016 Aug 31.
Published in final edited form as: Biochim Biophys Acta. 2008 Sep; 1778(9): 1881–1896. Published online 2007 Aug 11. doi: 10.1016/j.bbamem.2007.07.021
PMCID:
PMC5007122
AbstractArticlePDF–1.1M
2.
β-Barrel Proteins That Reside in the Escherichia coli Outer Membrane in Vivo Demonstrate Varied Folding Behavior in Vitro
Nancy K. Burgess, Thuy P. Dao, Ann Marie Stanley, Karen G. Fleming
J Biol Chem. 2008 Sep 26; 283(39): 26748–26758. doi: 10.1074/jbc.M802754200
PMCID:
PMC3258919
AbstractArticlePDF–710K
3.
Contribution of the Periplasmic Chaperone Skp to Efficient Presentation of the Autotransporter IcsA on the Surface of Shigella flexneri
Jennifer K. Wagner, Jason E. Heindl, Andrew N. Gray, Sumita Jain, Marcia B. Goldberg
J Bacteriol. 2009 Feb; 191(3): 815–821. Published online 2008 Dec 1. doi: 10.1128/JB.00989-08
PMCID:
PMC2632083
AbstractArticlePDF–835K
4.
The 5′ end of two redundant sRNAs is involved in the regulation of multiple targets, including their own regulator
Maude Guillier, Susan Gottesman
Nucleic Acids Res. 2008 Dec; 36(21): 6781–6794. Published online 2008 Oct 25. doi: 10.1093/nar/gkn742
PMCID:
PMC2588501
AbstractArticlePDF–1.9M
5.
Preparation and properties of pure, full-length IclR protein of Escherichia coli. Use of time-of-flight mass spectrometry to investigate the problems encountered.
L. J. Donald, I. V. Chernushevich, J. Zhou, A. Verentchikov, N. Poppe-Schriemer, D. J. Hosfield, J. B. Westmore, W. Ens, H. W. Duckworth, K. G. Standing
Protein Sci. 1996 Aug; 5(8): 1613–1624. doi: 10.1002/pro.5560050815
PMCID:
PMC2143496
SummaryPDF–2.1M
6.
Microseconds Dynamics Simulations of the Outer-Membrane Protease T
Marilisa Neri, Marc Baaden, Vincenzo Carnevale, Claudio Anselmi, Amos Maritan, Paolo Carloni
Biophys J. 2008 Jan 1; 94(1): 71–78. Published online 2007 Sep 7. doi: 10.1529/biophysj.107.116301
PMCID:
PMC2134885
AbstractArticlePDF–650K
7.
Initial Steps of Colicin E1 Import across the Outer Membrane of Escherichia coli
Muriel Masi, Phu Vuong, Matthew Humbard, Karen Malone, Rajeev Misra
J Bacteriol. 2007 Apr; 189(7): 2667–2676. Published online 2007 Feb 2. doi: 10.1128/JB.01448-06
PMCID:
PMC1855789
AbstractArticlePDF–309K
8.
Substrate Specificity of the Escherichia coli Outer Membrane Protease OmpP
Bum-Yeol Hwang, Navin Varadarajan, Haixin Li, Sarah Rodriguez, Brent L. Iverson, George Georgiou
J Bacteriol. 2007 Jan; 189(2): 522–530. Published online 2006 Nov 3. doi: 10.1128/JB.01493-06
PMCID:
PMC1797397
AbstractArticlePDF–402K
9.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
10.
MEROPS: the peptidase database
Neil D. Rawlings, Fraser R. Morton, Alan J. Barrett
Nucleic Acids Res. 2006 Jan 1; 34(Database issue): D270–D272. Published online 2005 Dec 28. doi: 10.1093/nar/gkj089
PMCID:
PMC1347452
AbstractArticlePDF–55K
11.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
12.
OmpT: Molecular Dynamics Simulations of an Outer Membrane Enzyme
Marc Baaden, Mark S. P. Sansom
Biophys J. 2004 Nov; 87(5): 2942–2953. Published online 2004 Aug 17. doi: 10.1529/biophysj.104.046987
PMCID:
PMC1304768
AbstractArticlePDF–569K
13.
Determination of the native form of FadD, the Escherichia coli fatty acyl-CoA synthetase, and characterization of limited proteolysis by outer membrane protease OmpT.
J H Yoo, O H Cheng, G E Gerber
Biochem J. 2001 Dec 15; 360(Pt 3): 699–706. doi: 10.1042/0264-6021:3600699
PMCID:
PMC1222275
SummaryPDF–267K
14.
Substrate Specificity of the Escherichia coli Outer Membrane Protease OmpT
John D. McCarter, Daren Stephens, Kevin Shoemaker, Steve Rosenberg, Jack F. Kirsch, George Georgiou
J Bacteriol. 2004 Sep; 186(17): 5919–5925. doi: 10.1128/JB.186.17.5919-5925.2004
PMCID:
PMC516829
AbstractArticlePDF–88K
15.
BOMP: a program to predict integral β-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria
Frode S. Berven, Kristian Flikka, Harald B. Jensen, Ingvar Eidhammer
Nucleic Acids Res. 2004 Jul 1; 32(Web Server issue): W394–W399. doi: 10.1093/nar/gkh351
PMCID:
PMC441489
AbstractArticlePDF–105K
16.
Signal Transduction Cascade between EvgA/EvgS and PhoP/PhoQ Two-Component Systems of Escherichia coli
Yoko Eguchi, Tadashi Okada, Shu Minagawa, Taku Oshima, Hirotada Mori, Kaneyoshi Yamamoto, Akira Ishihama, Ryutaro Utsumi
J Bacteriol. 2004 May; 186(10): 3006–3014. doi: 10.1128/JB.186.10.3006-3014.2004
PMCID:
PMC400602
AbstractArticlePDF–1.1M
17.
Complete nucleotide sequence and deduced amino acid sequence of the ompT gene of Escherichia coli K-12.
J Grodberg, M D Lundrigan, D L Toledo, W F Mangel, J J Dunn
Nucleic Acids Res. 1988 Feb 11; 16(3): 1209. doi: 10.1093/nar/16.3.1209
PMCID:
PMC334759
SummaryPage BrowsePDF–151K
18.
Utilization of Escherichia coli Outer-Membrane Endoprotease OmpT Variants as Processing Enzymes for Production of Peptides from Designer Fusion Proteins
Kazuaki Okuno, Masayuki Yabuta, Toshihiko Ooi, Shinichi Kinoshita
Appl Environ Microbiol. 2004 Jan; 70(1): 76–86. doi: 10.1128/AEM.70.1.76-86.2004
PMCID:
PMC321264
AbstractArticlePDF–795K
19.
ompT: Escherichia coli K-12 Structural Gene for Protein a (3b)
K. R. Rupprecht, G. Gordon, M. Lundrigan, R. C. Gayda, A. Markovitz, C. Earhart
J Bacteriol. 1983 Feb; 153(2): 1104–1106. doi: 10.1128/jb.153.2.1104-1106.1983
PMCID:
PMC221745
SummaryPage BrowsePDF–728K
20.
Gene envY of Escherichia coli K-12 affects thermoregulation of major porin expression.
M D Lundrigan, C F Earhart
J Bacteriol. 1984 Jan; 157(1): 262–268. doi: 10.1128/jb.157.1.262-268.1984
PMCID:
PMC215161
SummaryPage BrowsePDF–1.9M

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