PMC Links for GEO Profiles (Select 61901869) - PMC

Result Filters

Links from GEO Profiles

Items: 17

Select item 41238551.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 28579982.

Energetics-Based Protein Profiling on a Proteomic Scale: Identification of Proteins Resistant to Proteolysis

Chiwook Park, Sharleen Zhou, Jacqueline Gilmore, Susan Marqusee

J Mol Biol. Author manuscript; available in PMC 2010 Apr 21.

Published in final edited form as: J Mol Biol. 2007 May 18; 368(5): 1426–1437. Published online 2007 Mar 7. doi: 10.1016/j.jmb.2007.02.091

PMCID:: PMC2857998

Abstract Article PDF–2.6M

Select item 23735513.

The role of the conserved Lys68*:Glu265 intersubunit salt bridge in aspartate aminotransferase kinetics: Multiple forced covariant amino acid substitutions in natural variants

Edgar Deu, Keith A. Koch, Jack F. Kirsch

Protein Sci. 2002 May; 11(5): 1062–1073. doi: 10.1110/ps.0200902

PMCID:: PMC2373551

Abstract Article PDF–280K

Select item 22918024.

Time-dependent Translational Response of E. coli to Excess Zn(II)

J. Allen Easton, Peter Thompson, Michael W. Crowder

J Biomol Tech. 2006 Dec; 17(5): 303–307.

PMCID:: PMC2291802

Abstract Article PDF–238K

Select item 22867285.

Directed evolution relieves product inhibition and confers in vivo function to a rationally designed tyrosine aminotransferase

Steven C. Rothman, Mark Voorhies, Jack F. Kirsch

Protein Sci. 2004 Mar; 13(3): 763–772. doi: 10.1110/ps.03117204

PMCID:: PMC2286728

Abstract Article PDF–127K

Select item 21433676.

A large compressibility change of protein induced by a single amino acid substitution.

K. Gekko, Y. Tamura, E. Ohmae, H. Hayashi, H. Kagamiyama, H. Ueno

Protein Sci. 1996 Mar; 5(3): 542–545. doi: 10.1002/pro.5560050319

PMCID:: PMC2143367

Summary PDF–335K

Select item 21432257.

Redesign of the substrate specificity of Escherichia coli aspartate aminotransferase to that of Escherichia coli tyrosine aminotransferase by homology modeling and site-directed mutagenesis.

J. J. Onuffer, J. F. Kirsch

Protein Sci. 1995 Sep; 4(9): 1750–1757. doi: 10.1002/pro.5560040910

PMCID:: PMC2143225

Summary PDF–3.1M

Select item 16814818.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 14570529.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 132520010.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405