PMC Links for GEO Profiles (Select 62044126) - PMC

Cristine J. Reitz, Marjan Tavassoli, Da Hye Kim, Saumya Shah, Robert Lakin, Allen C. T. Teng, Yu-Qing Zhou, Wenping Li, Sina Hadipour-Lakmehsari, Peter H. Backx, Andrew Emili, Gavin Y. Oudit, Uros Kuzmanov, Anthony O. Gramolini

Proc Natl Acad Sci U S A. 2023 May 9; 120(19): e2212118120. Published online 2023 May 1. doi: 10.1073/pnas.2212118120

PMCID:: PMC10175742

Abstract Article PDF–4.2M

Select item 100339374.

Assessment of community efforts to advance network-based prediction of protein–protein interactions

Xu-Wen Wang, Lorenzo Madeddu, Kerstin Spirohn, Leonardo Martini, Adriano Fazzone, Luca Becchetti, Thomas P. Wytock, István A. Kovács, Olivér M. Balogh, Bettina Benczik, Mátyás Pétervári, Bence Ágg, Péter Ferdinandy, Loan Vulliard, Jörg Menche, Stefania Colonnese, Manuela Petti, Gaetano Scarano, Francesca Cuomo, Tong Hao, Florent Laval, Luc Willems, Jean-Claude Twizere, Marc Vidal, Michael A. Calderwood, Enrico Petrillo, Albert-László Barabási, Edwin K. Silverman, Joseph Loscalzo, Paola Velardi, Yang-Yu Liu

Nat Commun. 2023; 14: 1582. Published online 2023 Mar 22. doi: 10.1038/s41467-023-37079-7

PMCID:: PMC10033937

Abstract Article PDF–1.5M

Select item 85569475.

CTNNA3 genetic polymorphism may be a new genetic signal of type 2 diabetes in the Chinese Han population: a case control study

Yunjun Zhang, Xiaoman Zhou, Wanjuan Dai, Juan Sun, Mei Lin, Yutian Zhang, Yipeng Ding

BMC Med Genomics. 2021; 14: 257. Published online 2021 Oct 30. doi: 10.1186/s12920-021-01105-8

PMCID:: PMC8556947

Abstract Article PDF–1014K

Select item 83071946.

Cullin 1 (CUL1) Promotes Primary Ciliogenesis through the Induction of Ubiquitin-Proteasome-Dependent Dvl2 Degradation

Sun-Ok Kim, Kyoung Sang Cho, Bo Yeon Kim, Kyung Ho Lee

Int J Mol Sci. 2021 Jul; 22(14): 7572. Published online 2021 Jul 15. doi: 10.3390/ijms22147572

PMCID:: PMC8307194

Abstract Article PDF–2.8M

Select item 81650307.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 71699838.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 67781379.

The midbody interactome reveals unexpected roles for PP1 phosphatases in cytokinesis

Luisa Capalbo, Zuni I. Bassi, Marco Geymonat, Sofia Todesca, Liviu Copoiu, Anton J. Enright, Giuliano Callaini, Maria Giovanna Riparbelli, Lu Yu, Jyoti S. Choudhary, Enrico Ferrero, Sally Wheatley, Max E. Douglas, Masanori Mishima, Pier Paolo D’Avino

Nat Commun. 2019; 10: 4513. Published online 2019 Oct 4. doi: 10.1038/s41467-019-12507-9

PMCID:: PMC6778137

Abstract Article PDF–7.8M

Select item 567858110.

RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination

Nila Roy Choudhury, Gregory Heikel, Maryia Trubitsyna, Peter Kubik, Jakub Stanislaw Nowak, Shaun Webb, Sander Granneman, Christos Spanos, Juri Rappsilber, Alfredo Castello, Gracjan Michlewski

BMC Biol. 2017; 15: 105. Published online 2017 Nov 8. doi: 10.1186/s12915-017-0444-9

PMCID:: PMC5678581

Abstract Article PDF–3.2M

Select item 560201011.

Co-inheritance of mutations associated with arrhythmogenic cardiomyopathy and hypertrophic cardiomyopathy

Marzia De Bortoli, Chiara Calore, Alessandra Lorenzon, Martina Calore, Giulia Poloni, Elisa Mazzotti, Ilaria Rigato, Martina Perazzolo Marra, Paola Melacini, Sabino Iliceto, Gaetano Thiene, Cristina Basso, Luciano Daliento, Domenico Corrado, Alessandra Rampazzo, Barbara Bauce

Eur J Hum Genet. 2017 Oct; 25(10): 1165–1169. Published online 2017 Jul 12. doi: 10.1038/ejhg.2017.109

PMCID:: PMC5602010

Abstract Article PDF–399K

Select item 555425112.

Assessment of Three New Loci from Genome-wide Association Study in Essential Tremor in Chinese population

Yuan Zhang, Yuwen Zhao, Xiaoting Zhou, Kai Li, Minhan Yi, Jifeng Guo, Xinxiang Yan, Beisha Tang, Qiying Sun

Sci Rep. 2017; 7: 7981. Published online 2017 Aug 11. doi: 10.1038/s41598-017-08863-5

PMCID:: PMC5554251

Abstract Article PDF–1.0M

Select item 553161113.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 538293814.

Genome-wide association study in essential tremor identifies three new loci

Stefanie H. Müller, Simon L. Girard, Franziska Hopfner, Nancy D. Merner, Cynthia V. Bourassa, Delia Lorenz, Lorraine N. Clark, Lukas Tittmann, Alexandra I. Soto-Ortolaza, Stephan Klebe, Mark Hallett, Susanne A. Schneider, Colin A. Hodgkinson, Wolfgang Lieb, Zbigniew K. Wszolek, Manuela Pendziwiat, Oswaldo Lorenzo-Betancor, Werner Poewe, Sara Ortega-Cubero, Klaus Seppi, Alex Rajput, Anna Hussl, Ali H. Rajput, Daniela Berg, Patrick A. Dion, Isabel Wurster, Joshua M. Shulman, Karin Srulijes, Dietrich Haubenberger, Pau Pastor, Carles Vilariño-Güell, Ronald B. Postuma, Geneviève Bernard, Karl-Heinz Ladwig, Nicolas Dupré, Joseph Jankovic, Konstantin Strauch, Michel Panisset, Juliane Winkelmann, Claudia M. Testa, Eva Reischl, Kirsten E. Zeuner, Owen A. Ross, Thomas Arzberger, Sylvain Chouinard, Günther Deuschl, Elan D. Louis, Gregor Kuhlenbäumer, Guy A. Rouleau

Brain. 2016 Dec; 139(12): 3163–3169. Published online 2016 Oct 20. doi: 10.1093/brain/aww242

PMCID:: PMC5382938

Abstract Article PDF–371K

Select item 529221215.

Genome-wide association study identifies African-ancestry specific variants for metabolic syndrome

Fasil Tekola-Ayele, Ayo P. Doumatey, Daniel Shriner, Amy R. Bentley, Guanjie Chen, Jie Zhou, Olufemi Fasanmade, Thomas Johnson, Johnnie Oli, Godfrey Okafor, Benjami A. Eghan, Jr., Kofi Agyenim-Boateng, Clement Adebamowo, Albert Amoah, Joseph Acheampong, Adebowale Adeyemo, Charles N. Rotimi

Mol Genet Metab. Author manuscript; available in PMC 2017 Feb 5.

Published in final edited form as: Mol Genet Metab. 2015 Dec; 116(4): 305–313. Published online 2015 Oct 23. doi: 10.1016/j.ymgme.2015.10.008

PMCID:: PMC5292212

Abstract Article PDF–1.2M

Select item 491732116.

Polymorphisms of CHAT but not TFAM or VR22 are Associated with Alzheimer Disease Risk

Lili Gao, Yan Zhang, Jinghua Deng, Wenbing Yu, Yunxia Yu

Med Sci Monit. 2016; 22: 1924–1935. Published online 2016 Jun 7. doi: 10.12659/MSM.895984

PMCID:: PMC4917321

Abstract Article PDF–1024K

Select item 488497717.

CTNNA3 is a tumor suppressor in hepatocellular carcinomas and is inhibited by miR-425

Bing He, Ting Li, Lei Guan, Fang-E Liu, Xue-Mei Chen, Jing Zhao, Song Lin, Zhi-Zhen Liu, Hu-Qin Zhang

Oncotarget. 2016 Feb 16; 7(7): 8078–8089. Published online 2016 Jan 22. doi: 10.18632/oncotarget.6978

PMCID:: PMC4884977

Abstract Article PDF–5.0M

Select item 483609018.

Genome-wide association study of antidepressant response: involvement of the inorganic cation transmembrane transporter activity pathway

Enrico Cocchi, Chiara Fabbri, Changsu Han, Soo-Jung Lee, Ashwin A. Patkar, Prakash S. Masand, Chi-Un Pae, Alessandro Serretti

BMC Psychiatry. 2016; 16: 106. Published online 2016 Apr 18. doi: 10.1186/s12888-016-0813-x

PMCID:: PMC4836090

Abstract Article PDF–527K

Select item 467694919.

CTNNA3 and SEMA3D: promising loci for asthma exacerbation identified through multiple GWAS

Michael J. McGeachie, Ann C. Wu, Sze Man Tse, George L. Clemmer, Joanne Sordillo, Blanca E. Himes, Jessica Lasky-Su, Robert P. Chase, Fernando D. Martinez, Peter Weeke, Christian M. Shaffer, Hua Xu, Josh C. Denny, Dan M. Roden, Reynold A. Panettieri, Jr, Benjamin A. Raby, Scott T. Weiss, Kelan G. Tantisira

J Allergy Clin Immunol. Author manuscript; available in PMC 2016 Dec 1.

Published in final edited form as: J Allergy Clin Immunol. 2015 Dec; 136(6): 1503–1510. Published online 2015 Jun 12. doi: 10.1016/j.jaci.2015.04.039

PMCID:: PMC4676949

Abstract Article PDF–439K

Select item 433051720.

Genome-Wide Association Study of Copy Number Variations (CNVs) with Opioid Dependence

Dawei Li, Hongyu Zhao, Henry R Kranzler, Ming D Li, Kevin P Jensen, Tetyana Zayats, Lindsay A Farrer, Joel Gelernter

Neuropsychopharmacology. 2015 Mar; 40(4): 1016–1026. Prepublished online 2014 Sep 27. Published online 2014 Nov 19. doi: 10.1038/npp.2014.290

PMCID:: PMC4330517

Abstract Article PDF–488K

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