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Items: 1 to 20 of 55

1.
Prevalent Fast Evolution of Genes Involved in Heterochromatin Functions
Leila Lin, Yuheng Huang, Jennifer McIntyre, Ching-Ho Chang, Serafin Colmenares, Yuh Chwen G Lee
Mol Biol Evol. 2024 Sep; 41(9): msae181. Published online 2024 Aug 27. doi: 10.1093/molbev/msae181
PMCID:
PMC11408610
AbstractArticlePDF–1.6M
2.
The SWI/SNF nucleosome remodeler constrains enhancer activity during Drosophila wing development
Matthew J Niederhuber, Mary Leatham-Jensen, Daniel J McKay
Genetics. 2024 Feb; 226(2): iyad196. Published online 2023 Nov 9. doi: 10.1093/genetics/iyad196
PMCID:
PMC10847718
AbstractArticlePDF–1.5M
3.
NuRD‐independent Mi‐2 activity represses ectopic gene expression during neuronal maturation
Gabriel N Aughey, Elhana Forsberg, Krista Grimes, Shen Zhang, Tony D Southall
EMBO Rep. 2023 Apr; 24(4): e55362. Published online 2023 Feb 1. doi: 10.15252/embr.202255362
PMCID:
PMC10074086
AbstractArticlePDF–2.3M
4.
Species-specific chromatin landscape determines how transposable elements shape genome evolution
Yuheng Huang, Harsh Shukla, Yuh Chwen G Lee
eLife. 2022; 11: e81567. Published online 2022 Aug 23. doi: 10.7554/eLife.81567
PMCID:
PMC9398452
AbstractArticlePDF–5.5M
5.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
6.
Epigenetic Regulation of Drosophila Germline Stem Cell Maintenance and Differentiation
Velinda Vidaurre, Xin Chen
Dev Biol. Author manuscript; available in PMC 2022 May 1.
Published in final edited form as: Dev Biol. 2021 May; 473: 105–118. Published online 2021 Feb 18. doi: 10.1016/j.ydbio.2021.02.003
PMCID:
PMC7992187
AbstractArticlePDF–1.0M
7.
Ush regulates hemocyte-specific gene expression, fatty acid metabolism and cell cycle progression and cooperates with dNuRD to orchestrate hematopoiesis
Jonathan Lenz, Robert Liefke, Julianne Funk, Samuel Shoup, Andrea Nist, Thorsten Stiewe, Robert Schulz, Yumiko Tokusumi, Lea Albert, Hartmann Raifer, Klaus Förstemann, Olalla Vázquez, Tsuyoshi Tokusumi, Nancy Fossett, Alexander Brehm
PLoS Genet. 2021 Feb; 17(2): e1009318. Published online 2021 Feb 18. doi: 10.1371/journal.pgen.1009318
PMCID:
PMC7891773
AbstractArticlePDF–3.3M
8.
Genomics of Recombination Rate Variation in Temperature-Evolved Drosophila melanogaster Populations
Ari Winbush, Nadia D Singh
Genome Biol Evol. 2021 Jan; 13(1): evaa252. Published online 2020 Nov 28. doi: 10.1093/gbe/evaa252
PMCID:
PMC7851596
AbstractArticlePDF–778K
9.
The Mi-2 nucleosome remodeler and the Rpd3 histone deacetylase are involved in piRNA-guided heterochromatin formation
Bruno Mugat, Simon Nicot, Carolina Varela-Chavez, Christophe Jourdan, Kaoru Sato, Eugenia Basyuk, François Juge, Mikiko C. Siomi, Alain Pélisson, Séverine Chambeyron
Nat Commun. 2020; 11: 2818. Published online 2020 Jun 4. doi: 10.1038/s41467-020-16635-5
PMCID:
PMC7272611
AbstractArticlePDF–1.1M
10.
Release of promoter–proximal paused Pol II in response to histone deacetylase inhibition
Roshan Vaid, Jiayu Wen, Mattias Mannervik
Nucleic Acids Res. 2020 May 21; 48(9): 4877–4890. Published online 2020 Apr 16. doi: 10.1093/nar/gkaa234
PMCID:
PMC7229826
AbstractArticlePDF–5.1M
11.
Localization of Drosophila CENP-A to non-centromeric sites depends on the NuRD complex
Engin Demirdizen, Matthias Spiller-Becker, Arion Förtsch, Alexander Wilhelm, Samuel Corless, Debora Bade, Andrea Bergner, Bernd Hessling, Sylvia Erhardt
Nucleic Acids Res. 2019 Dec 16; 47(22): 11589–11608. Published online 2019 Nov 12. doi: 10.1093/nar/gkz962
PMCID:
PMC7145711
AbstractArticlePDF–6.3M
12.
Genetic Networks Underlying Natural Variation in Basal and Induced Activity Levels in Drosophila melanogaster
Louis P. Watanabe, Cameron Gordon, Mina Y. Momeni, Nicole C. Riddle
G3 (Bethesda) 2020 Apr; 10(4): 1247–1260. Published online 2020 Feb 3. doi: 10.1534/g3.119.401034
PMCID:
PMC7144082
AbstractArticlePDF–2.0M
13.
An Atlas of Transcription Factors Expressed in Male Pupal Terminalia of Drosophila melanogaster
Ben J. Vincent, Gavin R. Rice, Gabriella M. Wong, William J. Glassford, Kayla I. Downs, Jessica L. Shastay, Kenechukwu Charles-Obi, Malini Natarajan, Madelaine Gogol, Julia Zeitlinger, Mark Rebeiz
G3 (Bethesda) 2019 Dec; 9(12): 3961–3972. Published online 2019 Oct 16. doi: 10.1534/g3.119.400788
PMCID:
PMC6893207
AbstractArticlePDF–2.1M
14.
SWI/SNF chromatin remodeling controls Notch‐responsive enhancer accessibility
Zoe Pillidge, Sarah J Bray
EMBO Rep. 2019 May; 20(5): e46944. Published online 2019 Mar 26. doi: 10.15252/embr.201846944
PMCID:
PMC6500979
AbstractArticlePDF–1.6M
15.
A Comprehensive Drosophila melanogaster Transcription Factor Interactome
Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk
Cell Rep. Author manuscript; available in PMC 2019 Apr 26.
Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071
PMCID:
PMC6485956
AbstractArticlePDF–1.6M
16.
Mi-2/NuRD complex protects stem cell progeny from mitogenic Notch signaling
Evanthia Zacharioudaki, Julia Falo Sanjuan, Sarah Bray
eLife. 2019; 8: e41637. Published online 2019 Jan 29. doi: 10.7554/eLife.41637
PMCID:
PMC6379090
AbstractArticlePDF–4.7M
17.
Ras-ERK-ETS inhibition alleviates neuronal mitochondrial dysfunction by reprogramming mitochondrial retrograde signaling
Olivia F. Duncan, Lucy Granat, Ramya Ranganathan, Vandana K. Singh, David Mazaud, Manolis Fanto, David Chambers, Clive G. Ballard, Joseph M. Bateman
PLoS Genet. 2018 Jul; 14(7): e1007567. Published online 2018 Jul 30. doi: 10.1371/journal.pgen.1007567
PMCID:
PMC6085068
AbstractArticlePDF–21M
18.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
19.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
20.
Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster
Hirokazu Okada, H. Alexander Ebhardt, Sibylle Chantal Vonesch, Ruedi Aebersold, Ernst Hafen
Nat Commun. 2016; 7: 12649. Published online 2016 Sep 1. doi: 10.1038/ncomms12649
PMCID:
PMC5025782
AbstractArticlePDF–2.2M

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