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Items: 1 to 20 of 23

1.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
2.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
3.
Yeast Ssd1 is a non-enzymatic member of the RNase II family with an alternative RNA recognition site
Rosemary A Bayne, Uma Jayachandran, Aleksandra Kasprowicz, Stefan Bresson, David Tollervey, Edward W J Wallace, Atlanta G Cook
Nucleic Acids Res. 2022 Mar 21; 50(5): 2923–2937. Published online 2021 Jul 24. doi: 10.1093/nar/gkab615
PMCID:
PMC8934651
AbstractArticlePDF–4.4M
4.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
5.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
6.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
7.
A Functional Link Between Bir1 and the Saccharomyces cerevisiae Ctf19 Kinetochore Complex Revealed Through Quantitative Fitness Analysis
Vasso Makrantoni, Adam Ciesiolka, Conor Lawless, Josefin Fernius, Adele Marston, David Lydall, Michael J. R. Stark
G3 (Bethesda) 2017 Sep; 7(9): 3203–3215. Published online 2017 Jul 28. doi: 10.1534/g3.117.300089
PMCID:
PMC5592945
AbstractArticlePDF–1.7M
8.
One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Schütze, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner
Nat Methods. Author manuscript; available in PMC 2016 Sep 22.
Published in final edited form as: Nat Methods. 2016 Apr; 13(4): 371–378. Published online 2016 Feb 29. doi: 10.1038/nmeth.3795
PMCID:
PMC4869835
AbstractArticlePDF–2.7M
9.
Assembly, molecular organization, and membrane-binding properties of development-specific septins
Galo Garcia, III, Gregory C. Finnigan, Lydia R. Heasley, Sarah M. Sterling, Adeeti Aggarwal, Chad G. Pearson, Eva Nogales, Michael A. McMurray, Jeremy Thorner
J Cell Biol. 2016 Feb 29; 212(5): 515–529. doi: 10.1083/jcb.201511029
PMCID:
PMC4772501
AbstractArticlePDF–1.9M
10.
A haploproficient interaction of the transaldolase paralogue NQM1 with the transcription factor VHR1 affects stationary phase survival and oxidative stress resistance
Steve Michel, Markus A Keller, Mirjam MC Wamelink, Markus Ralser
BMC Genet. 2015; 16: 13. Published online 2015 Feb 11. doi: 10.1186/s12863-015-0171-6
PMCID:
PMC4331311
AbstractArticlePDF–2.0M
11.
A Visual Screen of Protein Localization during Sporulation Identifies New Components of Prospore Membrane-Associated Complexes in Budding Yeast
Chien Lam, Ethan Santore, Elizabeth Lavoie, Leor Needleman, Nicholas Fiacco, Carey Kim, Aaron M. Neiman
Eukaryot Cell. 2014 Mar; 13(3): 383–391. doi: 10.1128/EC.00333-13
PMCID:
PMC3957589
AbstractArticlePDF–1.3M
12.
Coiled-coil networking shapes cell molecular machinery
Yongqiang Wang, Xinlei Zhang, Hong Zhang, Yi Lu, Haolong Huang, Xiaoxi Dong, Jinan Chen, Jiuhong Dong, Xiao Yang, Haiying Hang, Taijiao Jiang
Mol Biol Cell. 2012 Oct 1; 23(19): 3911–3922. doi: 10.1091/mbc.E12-05-0396
PMCID:
PMC3459866
AbstractArticlePDF–7.0M
13.
Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs
Sara Sharifpoor, Dewald van Dyk, Michael Costanzo, Anastasia Baryshnikova, Helena Friesen, Alison C. Douglas, Ji-Young Youn, Benjamin VanderSluis, Chad L. Myers, Balázs Papp, Charles Boone, Brenda J. Andrews
Genome Res. 2012 Apr; 22(4): 791–801. doi: 10.1101/gr.129213.111
PMCID:
PMC3317160
AbstractArticlePDF–998K
14.
The Ime2 Protein Kinase Enhances the Disassociation of the Sum1 Repressor from Middle Meiotic Promoters
Noreen T. Ahmed, David Bungard, Marcus E. Shin, Michael Moore, Edward Winter
Mol Cell Biol. 2009 Aug; 29(16): 4352–4362. Published online 2009 Jun 15. doi: 10.1128/MCB.00305-09
PMCID:
PMC2725727
AbstractArticlePDF–1.3M
15.
Septins localize to microtubules during nutritional limitation in Saccharomyces cerevisiae
M Evangelina Pablo-Hernando, Yolanda Arnaiz-Pita, Hiroyuki Tachikawa, Francisco del Rey, Aaron M Neiman, Carlos R Vázquez de Aldana
BMC Cell Biol. 2008; 9: 55. Published online 2008 Oct 1. doi: 10.1186/1471-2121-9-55
PMCID:
PMC2584027
AbstractArticlePDF–2.8M
16.
Trans-Golgi Network and Endosome Dynamics Connect Ceramide Homeostasis with Regulation of the Unfolded Protein Response and TOR Signaling in Yeast
Carl J. Mousley, Kimberly Tyeryar, Kristina E. Ile, Gabriel Schaaf, Renee L. Brost, Charles Boone, Xueli Guan, Markus R. Wenk, Vytas A. Bankaitis
Mol Biol Cell. 2008 Nov; 19(11): 4785–4803. doi: 10.1091/mbc.E08-04-0426
PMCID:
PMC2575146
AbstractArticlePDF–2.0M
17.
SEPTIN STABILITY AND RECYCLING DURING DYNAMIC STRUCTURAL TRANSITIONS IN CELL DIVISION AND DEVELOPMENT
Michael A. McMurray, Jeremy Thorner
Curr Biol. Author manuscript; available in PMC 2009 Aug 26.
Published in final edited form as: Curr Biol. 2008 Aug 26; 18(16): 1203–1208. Published online 2008 Aug 14. doi: 10.1016/j.cub.2008.07.020
PMCID:
PMC2562167
AbstractArticlePDF–1.3M
18.
A protein interaction map for cell polarity development
Becky L. Drees, Bryan Sundin, Elizabeth Brazeau, Juliane P. Caviston, Guang-Chao Chen, Wei Guo, Keith G. Kozminski, Michelle W. Lau, John J. Moskow, Amy Tong, Laura R. Schenkman, Amos McKenzie, III, Patrick Brennwald, Mark Longtine, Erfei Bi, Clarence Chan, Peter Novick, Charles Boone, John R. Pringle, Trisha N. Davis, Stanley Fields, David G. Drubin
J Cell Biol. 2001 Aug 6; 154(3): 549–576. doi: 10.1083/jcb.200104057
PMCID:
PMC2196425
AbstractArticlePDF–868K
19.
Identification of a developmentally regulated septin and involvement of the septins in spore formation in Saccharomyces cerevisiae
J Cell Biol. 1996 Feb 1; 132(3): 399–411. doi: 10.1083/jcb.132.3.399
PMCID:
PMC2120726
SummaryPDF–2.7M
20.
Analysis of septins across kingdoms reveals orthology and new motifs
Fangfang Pan, Russell L Malmberg, Michelle Momany
BMC Evol Biol. 2007; 7: 103. Published online 2007 Jul 1. doi: 10.1186/1471-2148-7-103
PMCID:
PMC1931588
AbstractArticlePDF–1.8M

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