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Select item 111094831.

K48- and K63-linked ubiquitin chain interactome reveals branch- and length-specific ubiquitin interactors

Anita Waltho, Oliver Popp, Christopher Lenz, Lukas Pluska, Mahil Lambert, Volker Dötsch, Philipp Mertins, Thomas Sommer

Life Sci Alliance. 2024 Aug; 7(8): e202402740. Published online 2024 May 21. doi: 10.26508/lsa.202402740

PMCID:: PMC11109483

Abstract Article PDF–2.9M

Select item 108724772.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001383.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 105209434.

Light-dependent inhibition of clathrin-mediated endocytosis in yeast unveils conserved functions of the AP2 complex

Davia Prischich, Núria Camarero, Javier Encinar del Dedo, Maria Cambra-Pellejà, Judit Prat, Laura Nevola, Andrés Martín-Quirós, Elena Rebollo, Laura Pastor, Ernest Giralt, María Isabel Geli, Pau Gorostiza

iScience. 2023 Oct 20; 26(10): 107899. Published online 2023 Sep 12. doi: 10.1016/j.isci.2023.107899

PMCID:: PMC10520943

Abstract Article PDF–4.2M

Select item 103999875.

Art2 mediates selective endocytosis of methionine transporters during adaptation to sphingolipid depletion

Nathaniel L. Hepowit, Bradley Moon, Adam C. Ebert, Robert C. Dickson, Jason A. MacGurn

J Cell Sci. 2023 Jul 15; 136(14): jcs260675. Published online 2023 Jul 25. doi: 10.1242/jcs.260675

PMCID:: PMC10399987

Abstract Article

Select item 102333686.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 92098117.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 86282638.

Cooperative regulation of endocytic vesicle transport by yeast Eps15-like protein Pan1p and epsins

Nao Yoshida, Ippo Ogura, Makoto Nagano, Tadashi Ando, Junko Y. Toshima, Jiro Toshima

J Biol Chem. 2021 Nov; 297(5): 101254. Published online 2021 Sep 27. doi: 10.1016/j.jbc.2021.101254

PMCID:: PMC8628263

Abstract Article PDF–3.0M

Select item 81291109.

Structure of the endocytic adaptor complex reveals the basis for efficient membrane anchoring during clathrin-mediated endocytosis

Javier Lizarrondo, David P. Klebl, Stephan Niebling, Marc Abella, Martin A. Schroer, Haydyn D. T. Mertens, Katharina Veith, Roland Thuenauer, Dmitri I. Svergun, Michal Skruzny, Frank Sobott, Stephen P. Muench, Maria M. Garcia-Alai

Nat Commun. 2021; 12: 2889. Published online 2021 May 17. doi: 10.1038/s41467-021-23151-7

PMCID:: PMC8129110

Abstract Article PDF–4.9M

Select item 772147510.

A Selective Autophagy Pathway for Phase-Separated Endocytic Protein Deposits

Florian Wilfling, Chia-Wei Lee, Philipp S. Erdmann, Yumei Zheng, Dawafuti Sherpa, Stefan Jentsch, Boris Pfander, Brenda A. Schulman, Wolfgang Baumeister

Mol Cell. 2020 Dec 3; 80(5): 764–778.e7. doi: 10.1016/j.molcel.2020.10.030

PMCID:: PMC7721475

Abstract Article

Select item 771875111.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 756021612.

AP‐3 vesicle uncoating occurs after HOPS‐dependent vacuole tethering

Jannis Schoppe, Muriel Mari, Erdal Yavavli, Kathrin Auffarth, Margarita Cabrera, Stefan Walter, Florian Fröhlich, Christian Ungermann

EMBO J. 2020 Oct 15; 39(20): e105117. Published online 2020 Aug 25. doi: 10.15252/embj.2020105117

PMCID:: PMC7560216

Abstract Article PDF–3.6M

Select item 721840913.

The protein architecture of the endocytic coat analyzed by FRET microscopy

Michal Skruzny, Emma Pohl, Sandina Gnoth, Gabriele Malengo, Victor Sourjik

Mol Syst Biol. 2020 May; 16(5): e9009. Published online 2020 May 13. doi: 10.15252/msb.20199009

PMCID:: PMC7218409

Abstract Article PDF–1.1M

Select item 672320014.

Remodeling Membrane Binding by Mono-Ubiquitylation

Neta Tanner, Oded Kleifeld, Iftach Nachman, Gali Prag

Biomolecules. 2019 Aug; 9(8): 325. Published online 2019 Jul 31. doi: 10.3390/biom9080325

PMCID:: PMC6723200

Abstract Article PDF–1.5M

Select item 660581215.

TORC2 controls endocytosis through plasma membrane tension

Margot Riggi, Clélia Bourgoint, Mariano Macchione, Stefan Matile, Robbie Loewith, Aurélien Roux

J Cell Biol. 2019 Jul 1; 218(7): 2265–2276. Published online 2019 May 23. doi: 10.1083/jcb.201901096

PMCID:: PMC6605812

Abstract Article PDF–2.5M

Select item 608693216.

Systematic Nanoscale Analysis of Endocytosis Links Efficient Vesicle Formation to Patterned Actin Nucleation

Markus Mund, Johannes Albertus van der Beek, Joran Deschamps, Serge Dmitrieff, Philipp Hoess, Jooske Louise Monster, Andrea Picco, François Nédélec, Marko Kaksonen, Jonas Ries

Cell. 2018 Aug 9; 174(4): 884–896.e17. doi: 10.1016/j.cell.2018.06.032

PMCID:: PMC6086932

Abstract Article PDF–7.4M

Select item 607845317.

Target of rapamycin complex 2–dependent phosphorylation of the coat protein Pan1 by Akl1 controls endocytosis dynamics in Saccharomyces cerevisiae

Clélia Bourgoint, Delphine Rispal, Marina Berti, Ireos Filipuzzi, Stephen B. Helliwell, Manoël Prouteau, Robbie Loewith

J Biol Chem. 2018 Aug 3; 293(31): 12043–12053. Published online 2018 Jun 12. doi: 10.1074/jbc.RA117.001615

PMCID:: PMC6078453

Abstract Article PDF–3.9M

Select item 599489518.

The contributions of the actin machinery to endocytic membrane bending and vesicle formation

Andrea Picco, Wanda Kukulski, Hetty E. Manenschijn, Tanja Specht, John A. G. Briggs, Marko Kaksonen

Mol Biol Cell. 2018 Jun 1; 29(11): 1346–1358. doi: 10.1091/mbc.E17-11-0688

PMCID:: PMC5994895

Abstract Article PDF–4.2M

Select item 594014319.

A Flow Cytometry-Based Phenotypic Screen To Identify Novel Endocytic Factors in Saccharomyces cerevisiae

Kristie Wrasman, Salvatore L. Alioto, Yorke Zhang, Kyle Hoban, Marjon Khairy, Bruce L. Goode, Beverly Wendland

G3 (Bethesda) 2018 May; 8(5): 1497–1512. Published online 2018 Mar 14. doi: 10.1534/g3.118.200102

PMCID:: PMC5940143

Abstract Article PDF–2.3M

Select item 578049320.

Epsin and Sla2 form assemblies through phospholipid interfaces

Maria M. Garcia-Alai, Johannes Heidemann, Michal Skruzny, Anna Gieras, Haydyn D. T. Mertens, Dmitri I. Svergun, Marko Kaksonen, Charlotte Uetrecht, Rob Meijers

Nat Commun. 2018; 9: 328. Published online 2018 Jan 23. doi: 10.1038/s41467-017-02443-x